BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,840,748	0	G	C	38.9%	37.6 / 20.4	36	A409P (GCC→CCC)	ascF	beta‑glucoside specific PTS enzyme IIBC component
Reads supporting (aligned to +/- strand): ref base G (9/13); new base C (0/14); total (9/27)
Fisher's exact test for biased strand distribution p-value = 6.01e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 107 total aligned reads displayed.

GCGTTATATGGCGTGGCGATCCGCCTGAAACGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGGTGTTCGCGGTCATG  >  NC_000913/2840652‑2840843

gCGTTATATGGCGTGGCGATCCGCCTGAAACGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑g                                                                                                  <  1:5663953/97‑1 (MQ=255)

gCGTTATATGGCGTGGCGATCCGCCTGAAACGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑g                                                                                                  <  1:7654245/97‑1 (MQ=255)

gCGTTATATGGCGTGGCGATCCGCCTGAAACGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑g                                                                                                  <  1:19701464/97‑1 (MQ=255)

 cGTTATATGGCGTGGCGATCCGCTTGAAACGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑g‑c                                                                                                <  1:20096736/97‑1 (MQ=255)

  gTTATGTGTGGTGGCGATCCGCCTGAACCGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑g‑cc                                                                                               <  1:7025967/97‑1 (MQ=255)

  gTTATATGGCGTGGCGATCCGCCTGAAACGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑g‑cc                                                                                               <  1:8925016/97‑1 (MQ=255)

  gTTATATGGCGTGGCGATCCGCCTGAAACGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑g‑cc                                                                                               <  1:13477447/97‑1 (MQ=255)

  gTTATATGGCGTGGCGATCCGCCTGAAACGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑g‑cc                                                                                               <  1:7089438/97‑1 (MQ=255)

    tataTGGCGTGGCGATCGGCCTGAACCGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑g‑ccag                                                                                             <  1:4188243/97‑1 (MQ=255)

     atatGGCGTGGCGATCCGCCTGAAACGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑g‑ccagc                                                                                            <  1:14966900/97‑1 (MQ=255)

     atatGGCGTGGCGATCCGCCTGAAACGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑g‑ccagc                                                                                            <  1:5795871/97‑1 (MQ=255)

     atatGGCGTGGCGACCCGCCTGAAACGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑g‑ccagc                                                                                            <  1:18604436/97‑1 (MQ=255)

       atGTCGTGGCGATCCGCCTGAAACGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑g‑ccagcca                                                                                          <  1:20610614/97‑1 (MQ=255)

       atGGCGTGGCGATCCGCCTGAAACGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑g‑ccagcca                                                                                          <  1:17907964/97‑1 (MQ=255)

        tggcgtggcgATCCGCCTGAAACGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCGG‑G‑CCAGCTAc                                                                                         >  1:2256094/1‑97 (MQ=255)

             tggcgATCCGCCGGAAACTTCCGCTTATCGCGAGTTTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑C‑CCAGCCACTCAAt                                                                                    <  1:17480646/97‑1 (MQ=255)

               gtggtCCGCGTGAATCGCCCGTTTATCGCCATTCTTATCAGCGGTTTTTTTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑G‑CCAGCCACTCAATgg                                                                                  <  1:20786974/93‑1 (MQ=255)

                 aaTCCGCTGGAAACGTCCCCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑C‑CCAGCCACTCAATGGCa                                                                                <  1:9158135/96‑1 (MQ=255)

                  aTCCGCCTGAAACGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GCGGGG‑GGGT‑G‑CCGGCCACCCAATGGCa                                                                                >  1:18407557/1‑97 (MQ=255)

                   cccGCCTGAACCGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAgc                                                                              <  1:2282086/96‑1 (MQ=255)

                         tGAAACTTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCggg                                                                        <  1:20964514/97‑1 (MQ=255)

                          gAAACGTCTGCTTATCGCCAGTCTTATCAGCGGTTTTTTTTGC‑GGCGCGGTGGCTGGTAGG‑GC‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCgggg                                                                       <  1:15138621/97‑1 (MQ=255)

                           aaccGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTGGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑C‑CCAGCCACTCAATGGCAGCGCCGGGGc                                                                      <  1:7319633/94‑1 (MQ=255)

                               gTCCGCTTATCGCCAGTCTTATCAGCGTTTTTATTTGC‑GGCGCGGTTGCCGGTAGG‑GC‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTAtt                                                                  <  1:15671670/97‑1 (MQ=255)

                                 cgccTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTa                                                                <  1:15443672/94‑1 (MQ=255)

                                  cGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTAc                                                               <  1:1152808/97‑1 (MQ=255)

                                   tctgaTCCCCAGTCTCATCGGCGCTTTTCTTGGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑C‑CCACCCACTCAATGGCAGCGCCGGGGCTATTTAcc                                                              <  1:1663897/93‑1 (MQ=255)

                                    tttATGGCCGGTCTATCCAGCGGTTTATTTTGC‑GGCGGGGTTGCCGGTAGG‑GC‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCa                                                             <  1:15136683/96‑1 (MQ=255)

                                    tttATCGCCAGTCTTACCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTAGG‑GC‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCa                                                             <  1:7843640/96‑1 (MQ=255)

                                        ccGCCATTCTTATCAGCGGTTTTATTTGC‑GGGGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGt                                                         <  1:12540387/96‑1 (MQ=255)

                                         ggCCTGTCTTGTCAGCTTTTTTTTGGGC‑GGCGCGTTTGCGGGTATG‑GC‑GGG‑GCTC‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTg                                                        <  1:7620864/96‑1 (MQ=255)

                                         cGCCAGTCTTATCAGCGGTTTTATTGGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTg                                                        <  1:12826979/97‑1 (MQ=255)

                                          gCCAGTTTTATCAGCGTTTTTATTGGG‑GGCGGGGTGGCGGGTAGG‑GC‑GGG‑CCTG‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGc                                                       <  1:17443900/97‑1 (MQ=255)

                                            cAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAg                                                     <  1:4491790/97‑1 (MQ=255)

                                             aGTTTTATCAGGGGTTTTATTGGC‑GGCGGGGTTGCCGGTATG‑GC‑GGG‑GTTG‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGt                                                    <  1:5427819/97‑1 (MQ=255)

                                              gttttATCAGCGGTTTTTTTGGC‑GCCGCGTTTGCCGGTATG‑GG‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGtt                                                   <  1:7966935/94‑1 (MQ=255)

                                              gTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTGTG‑GC‑GGG‑TCTT‑C‑CCAGCCACTCGATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGtt                                                   <  1:17737368/97‑1 (MQ=255)

                                               tCTTATCCGGTGTTTTTTGGGC‑GGGGGGGTTCCAGGTATG‑GC‑GGG‑GTTC‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGttc                                                  <  1:4984356/97‑1 (MQ=255)

                                               tCTTATCAGCGGTTTT‑TTTGCGGGCGCGTTTGCCGGTAGG‑GC‑GGG‑CCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGttc                                                  <  1:18635387/97‑1 (MQ=255)

                                                tttATCGGCGTTTTTATTTGC‑GGCGGGGTTGCCGGTAGG‑GC‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGttct                                                 <  1:10305648/96‑1 (MQ=255)

                                                tttATCAGCGTTTTTTTTGGC‑GGCGCGTTTGCGGGTAGG‑GC‑GGG‑GCTT‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGttct                                                 <  1:18769995/96‑1 (MQ=255)

                                                cTTATCGGCGGTTTTATTGGC‑GCCGCGTTTGCCGGTAGG‑GC‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGttct                                                 <  1:17988697/97‑1 (MQ=255)

                                                 ttATCGGCGTTTTTTTTGGC‑GGCGCGGTTGCCGGTAGG‑GC‑GGG‑GCTT‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGttctt                                                <  1:17130255/97‑1 (MQ=255)

                                                 ttATCGGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTGTG‑GC‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGttctt                                                <  1:8601003/97‑1 (MQ=255)

                                                 ttATCAGCGGTTTTATTGGC‑GGCGCGTTTGCGGGTAGG‑GC‑GGG‑GCTG‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGttctt                                                <  1:19079021/97‑1 (MQ=255)

                                                  tATCGGCGTTTTTTTTTGC‑GGCGCGGTTCCCGTTATG‑GC‑GGG‑GCTT‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGttcttc                                               <  1:671145/97‑1 (MQ=255)

                                                   ttCAGGGGTTTGTTTTGC‑GGTGC‑GTTCGCGGTGTG‑GG‑GGGCGCTT‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCg                                              <  1:6908239/96‑1 (MQ=255)

                                                   atgaGCGTTTTCATTGGG‑GGCGGGGTTGCGGTTATG‑GC‑GGG‑CCTG‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCg                                              <  1:182395/94‑1 (MQ=255)

                                                   aTCAGCGGTTTTATTTGC‑GGCGCGTTTGCCGGTATG‑GC‑GGG‑GCTT‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCg                                              <  1:11556541/97‑1 (MQ=255)

                                                    tCAGCGTTTTTATTTGC‑GGCGCGTTTGCCGGTAGG‑GC‑GGG‑GCTT‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGa                                             <  1:1982914/97‑1 (MQ=255)

                                                      aGCTGTTTTATTTGG‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATc                                           <  1:7622656/97‑1 (MQ=255)

                                                      aGCGTTTTTATTGGG‑GGCGCGTTTGCCGGTAGG‑GG‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATc                                           <  1:6029102/97‑1 (MQ=255)

                                                       gCGGTTTTATTTGC‑GGCGCGGTTGCCGTTATG‑GC‑GGG‑GCTC‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATcc                                          <  1:4583518/97‑1 (MQ=255)

                                                       ccgtttttATTGGC‑GGGCGGGTTGCCGATTTG‑GC‑GGG‑CCTC‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATcc                                          <  1:4765629/93‑1 (MQ=255)

                                                        gtgTTTTTTTTGC‑GGCGCGGTGCCCGTTATG‑GC‑GGT‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCg                                         <  1:4427715/95‑1 (MQ=255)

                                                        ggtttttttttGG‑GGCGCGTTTGCGGGTATG‑GC‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCg                                         <  1:9310401/94‑1 (MQ=255)

                                                        ggtttttATTGGC‑GGCGGGGTTCCCGGTATG‑GC‑GGG‑GCTG‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCg                                         <  1:19747819/94‑1 (MQ=255)

                                                        cgtttttttTCGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTG‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCg                                         <  1:11487429/94‑1 (MQ=255)

                                                        cGGTTTTATTGGG‑GGCGCGTTTGCCGGTGTG‑GG‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCg                                         <  1:13459297/97‑1 (MQ=255)

                                                          tttttttTGGG‑GGCGCGGTTGCGGGTTTG‑GG‑GGG‑GCTT‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGc                                       <  1:17933998/96‑1 (MQ=255)

                                                          gTTTTTTTGGG‑GGCGCGTTGCCCGTTAGG‑GC‑GGG‑GCTT‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGc                                       <  1:19227716/97‑1 (MQ=255)

                                                                tttGC‑GGCGGGTTTGCGGGTAGG‑GC‑GGG‑CCTC‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATcc                                 <  1:13989921/97‑1 (MQ=255)

                                                                 tgcc‑ggcgCGG‑GGCCGGTTTGCGG‑GGG‑CCTT‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCa                                <  1:2619895/94‑1 (MQ=255)

                                                                   gc‑ggcgGGTTTGCCGTTAGG‑GG‑GGG‑CCTC‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAAt                              <  1:16044664/97‑1 (MQ=255)

                                                                   gc‑ggcgGGGTTGCCGGTGTG‑GC‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAAt                              <  1:4749821/97‑1 (MQ=255)

                                                                   gc‑ggcgCGGTTGCCTGTAGG‑GG‑GGG‑TCTT‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAAt                              <  1:6355022/97‑1 (MQ=255)

                                                                       gcgcGGTTGCGGTTATG‑GG‑GGG‑GCTT‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAg                           <  1:1247581/97‑1 (MQ=255)

                                                                       gcgcGGTGGCCGTTATG‑GC‑GGC‑GCTC‑C‑CCAGCCACTCAATGGCAGCGGCGGGGCTATTTACCAGCGTGCATTTCTTCGATCCGGCGAATCCAATGAg                           <  1:3555854/97‑1 (MQ=255)

                                                                        cgcgTTTCCCGGTGGG‑GG‑GGG‑CCTT‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGc                          <  1:9074246/97‑1 (MQ=255)

                                                                        cgcgGTTGCTGGTGGG‑GG‑GGG‑GCTT‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGc                          <  1:12747981/97‑1 (MQ=255)

                                                                         gcgGTTGCCGGTATG‑GC‑GGG‑CCTC‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCa                         <  1:17316182/97‑1 (MQ=255)

                                                                          cgtttGCGGGTATG‑CG‑GGG‑GCTG‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCAt                        <  1:4811942/94‑1 (MQ=255)

                                                                           ggTTGGCGGTTAG‑GT‑GGG‑GCTT‑GCCCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCAt                        <  1:1513694/97‑1 (MQ=255)

                                                                           ggTTGCGGGTAGG‑GC‑GGG‑CCTG‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATc                       <  1:8140881/97‑1 (MQ=255)

                                                                            gtgcccGGTGGG‑GC‑GGC‑GCTC‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCg                      <  1:16775181/93‑1 (MQ=255)

                                                                               gcgggTGTG‑GC‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCt                   <  1:4870681/94‑1 (MQ=255)

                                                                               gCCGTTAGG‑GG‑GGG‑CCTC‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCt                   <  1:3101945/97‑1 (MQ=255)

                                                                                ccGGTTTG‑GG‑GGG‑GCTTCC‑CCAGCCACTCAATGGCAGCCCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCt                   <  1:5908884/97‑1 (MQ=255)

                                                                                ccGGTTGG‑GC‑GGG‑GCTC‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTg                  <  1:6198374/97‑1 (MQ=255)

                                                                                 cGGGATG‑GC‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTgg                 <  1:15724548/97‑1 (MQ=255)

                                                                                   gTATG‑GG‑GGT‑GCTC‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGgt               <  1:11981113/97‑1 (MQ=255)

                                                                                      tG‑GC‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGGGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGGTGtt            >  1:4066375/1‑97 (MQ=255)

                                                                                      gg‑gC‑GGG‑CCTC‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGGTGtt            <  1:5864997/96‑1 (MQ=255)

                                                                                       g‑gC‑GGG‑GCTT‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGGTGTTc           <  1:3683423/97‑1 (MQ=255)

                                                                                        gtggggg‑gCCT‑GCCCATCCACTCAATGGCAGCGCCGGGTCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGgtgt             <  1:11644206/93‑1 (MQ=255)

                                                                                        ggggggg‑gCTT‑TCCCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGgtgt             <  1:16769855/93‑1 (MQ=255)

                                                                                         gC‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGCATCCAATGGGGATCGTCTGGGGGtttg          >  1:19636555/1‑95 (MQ=255)

                                                                                         gC‑GGG‑GCTC‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGGTGTTcg          <  1:12264106/97‑1 (MQ=255)

                                                                                          ggggg‑gCTG‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGGTGTTcg          <  1:6506684/95‑1 (MQ=255)

                                                                                           gggg‑gCTT‑C‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGGTGTTcgc         <  1:4769165/96‑1 (MQ=255)

                                                                                           gggg‑gCCT‑GCCCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGGTGTTcg          <  1:1487814/96‑1 (MQ=255)

                                                                                            ggg‑gCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGGGGGTcgcg        >  1:11903035/1‑97 (MQ=255)

                                                                                             gg‑gCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGGTGTTCGCgg       >  1:1796822/1‑97 (MQ=255)

                                                                                              g‑gCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTTGATCAGGCGAATCCAATGAGCATCGTCTGGGGGGTTGCGGt      >  1:7990231/1‑97 (MQ=255)

                                                                                              g‑gCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGGGGTTCGCGGt      >  1:3387027/1‑97 (MQ=255)

                                                                                              g‑gCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGGGGTTCGCGGt      >  1:15844540/1‑97 (MQ=255)

                                                                                                 cTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGGTGTTCGCGGTCa    >  1:2352565/1‑97 (MQ=255)

                                                                                                  tt‑G‑CCAGTCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGGTGTTCGCGGTCAt   <  1:12718685/97‑1 (MQ=255)

                                                                                                   tcg‑ccagccaCTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGGTGTTCGCGGTCAt   <  1:19633932/95‑1 (MQ=255)

                                                                                                   t‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGGTGTTCGCGGTCATg  >  1:8602827/1‑97 (MQ=255)

GCGTTATATGGCGTGGCGATCCGCCTGAAACGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGC‑GGCGCGGTTGCCGGTATG‑GC‑GGG‑GCTT‑G‑CCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGGTGTTCGCGGTCATG  >  NC_000913/2840652‑2840843

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`