Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,101,5070TG34.8% 843.3 / 84.3 353intergenic (+77/‑183)sodA/kdgTsuperoxide dismutase (Mn)/2‑dehydro‑3‑deoxy‑D‑gluconate:H(+) symporter
Reads supporting (aligned to +/- strand):  ref base T (26/204);  new base G (123/0);  total (149/204)
Fisher's exact test for biased strand distribution p-value = 0.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 445 total aligned reads displayed.

GTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATG  >  NC_000913/4101411‑4101603
                                                                                                  |                                                                                                 
gTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑ggtggt                                                                                                   <  1:855387/97‑1 (MQ=255)
gTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑ggtggt                                                                                                   <  1:13792622/97‑1 (MQ=255)
 ttttGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGtt                                                                                                  <  1:5721297/97‑1 (MQ=255)
  tttGCGGAGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATCAA‑CCATCGCCAACGGC‑GGTGGttt                                                                                                 <  1:5848523/97‑1 (MQ=255)
    tggggcaAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGttttt                                                                                               <  1:18075749/94‑1 (MQ=255)
    tccggcgAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGttttt                                                                                               <  1:13401410/95‑1 (MQ=255)
    tGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGgtttt                                                                                               >  1:16797491/1‑97 (MQ=255)
     gcggcgAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGgttttt                                                                                              >  1:7264254/1‑97 (MQ=255)
       ggcgAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGgttttttt                                                                                            >  1:11292795/1‑96 (MQ=255)
          gAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGa                                                                                         <  1:8114166/97‑1 (MQ=255)
           aaaaaaTAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGAt                                                                                        <  1:16034648/97‑1 (MQ=255)
            aaaaaTAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATc                                                                                       <  1:4836909/97‑1 (MQ=255)
            aaaaaTAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGTGTTTTGTGAtt                                                                                       >  1:5519271/1‑96 (MQ=255)
                 taatCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AAttt                                                                                 <  1:18352484/97‑1 (MQ=255)
                 taatCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AAttt                                                                                 <  1:2354308/97‑1 (MQ=255)
                 taatCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGTTTTTTGTGATC‑AAttt                                                                                 >  1:7085026/1‑97 (MQ=255)
                  aatCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGCGGGGGGTTTTTTTTGGTTC‑AAttt                                                                                 >  1:17092331/1‑97 (MQ=255)
                     cATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCaaa                                                                             <  1:9773240/97‑1 (MQ=255)
                       tttGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGTTTTTTTTGATT‑AATTTTAAAAt                                                                           >  1:6452632/1‑97 (MQ=255)
                       tttGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGGTTTTTGTTATCAAATTTCaaat                                                                            >  1:2091483/1‑96 (MQ=255)
                           ccgccTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATaaaa                                                                       <  1:15139121/97‑1 (MQ=255)
                           ccgccTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGTTTTTTGTGATC‑AATTTtaaaataaaa                                                                       >  1:20669009/1‑97 (MQ=255)
                             gccTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGTTTTTTTTGATC‑AATTTCAAAATAAAAAc                                                                     >  1:20013244/1‑97 (MQ=255)
                               ctgctgCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTTTGATC‑AATTTCAAAATAAAAACaa                                                                   >  1:9234728/1‑97 (MQ=255)
                               ctgctgCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACaa                                                                   <  1:4550940/97‑1 (MQ=255)
                                tgctgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGTTTTTTTTGGTT‑CATTTTAAAATaaaaaaaaa                                                                  >  1:16094717/1‑96 (MQ=255)
                                 gctgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATg                                                                 <  1:2695227/97‑1 (MQ=255)
                                 gctgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGTTTTTTTTGATC‑AATTTCAAAATaaaaaaaaaa                                                                 >  1:12069025/1‑95 (MQ=255)
                                  ctgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGa                                                                <  1:15233950/97‑1 (MQ=255)
                                   tgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGAt                                                               <  1:911490/97‑1 (MQ=255)
                                    gcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGTTTTTTTTGGTC‑AATTTTAAAATAAAAAAAAAGaat                                                              >  1:5659079/1‑95 (MQ=255)
                                    gcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGTTTTTTGTGGTC‑AATTTTAAAATAAAAAAAATGATc                                                              >  1:13240848/1‑97 (MQ=255)
                                     cAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATcc                                                             <  1:1949276/97‑1 (MQ=255)
                                     cAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGTTTTTTTTGATC‑AATTTCAAAATAAAAAAAAAAATcc                                                             >  1:1872043/1‑97 (MQ=255)
                                      aaTGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCg                                                            <  1:6981126/97‑1 (MQ=255)
                                      aaTGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCg                                                            <  1:19399225/97‑1 (MQ=255)
                                      aaTGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGTTTTTTTTGATC‑AATTTCAAAATAAAAAAAATGATCCg                                                            >  1:2275305/1‑97 (MQ=255)
                                       aTGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGGTTTTTTGTGATT‑AATTTCAAAATAAAAAAAATGATCCGa                                                           >  1:13662375/1‑97 (MQ=255)
                                       aTGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGTTTTTTGTGATC‑AATTTCAAAATAAAAACAAAGATccca                                                           >  1:19125452/1‑95 (MQ=255)
                                        tGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGGTTTTTTGTGATA‑AAATTCAAAATAAAAAAAATGATACGat                                                          >  1:20485607/1‑97 (MQ=255)
                                        tGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGTTTTTTGTGATT‑AATTTCAAAATAAAAACAATGATCCCat                                                          >  1:1551486/1‑97 (MQ=255)
                                         gAGGCGTATAGTCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGata                                                         <  1:13990539/97‑1 (MQ=255)
                                         gAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGGTTTTTTGTGATC‑AATTTCAAAATAAAAAAAATGATCCGata                                                         >  1:10194692/1‑97 (MQ=255)
                                          nggCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGTTTTTTTTGTTC‑AATTTTAAAATAAAAAAAAAGATTCCataa                                                        >  1:11138526/2‑97 (MQ=255)
                                              gTATGGGCCCAATATCAG‑TTAAAAAAAGAACCCACGGCAAACGGC‑‑GTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGataaaaata                                                   <  1:17592488/97‑1 (MQ=255)
                                                 taGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGataaaaataaa                                                 <  1:5414575/97‑1 (MQ=255)
                                                  aGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGTTTTTTTTGATC‑AATTTTAAAATAAAAAAAATGATCCGataaaaataaaa                                                >  1:5248675/1‑97 (MQ=255)
                                                   ggCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGTTTTTTTTGATC‑AATTTTAAAATAAAAAAAAAGATCCCataaaaaaaaaaa                                               >  1:10657346/1‑96 (MQ=255)
                                                   ggCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGTTTTTTTGGGTC‑AATTTCAAAATAAAAAAAATGATCCGCTAAAAATAAAAc                                               >  1:19901514/1‑97 (MQ=255)
                                                   ggCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGCGGTGTTTTTGGGATC‑AATTTCAAAATAAAAAAAATGATCCGATGAAAAAAATAc                                               >  1:7368806/1‑97 (MQ=255)
                                                    gCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACa                                              <  1:15428363/97‑1 (MQ=255)
                                                     ccGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGGTTTTTTTTGGTT‑AATTTTCAAAAAAAAAAAAAGATCCGCTAAAAATAAAACAg                                             >  1:12578488/1‑97 (MQ=255)
                                                     ccGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGGTTTTTTTGGTC‑AATTTCAAAATAAAAAAAATTATCCGATAAAAATAAAAAAg                                             >  1:4689853/1‑97 (MQ=255)
                                                       gCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCg                                           <  1:5026135/97‑1 (MQ=255)
                                                        cATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGTTTTTTGTGATC‑AATTTCAAAATAAAAAAAATGATCCGATAAAAATAAAACAGCGt                                          >  1:13597010/1‑97 (MQ=255)
                                                         atatCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGtt                                         <  1:8662449/97‑1 (MQ=255)
                                                         atatCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGTTTTTTTTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCggt                                         >  1:3904483/1‑95 (MQ=255)
                                                          tatCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGttt                                        <  1:3422896/97‑1 (MQ=255)
                                                          tatCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGttt                                        <  1:3614087/97‑1 (MQ=255)
                                                          tatCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGGTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGttt                                        >  1:17821228/1‑97 (MQ=255)
                                                           atCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGGTTTTTTGTGATC‑AATTTTAAAATAAAAACAATGATCCGATAAAAATAAAAAAGCGtttt                                       >  1:14102410/1‑96 (MQ=255)
                                                            tCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCa                                      <  1:12484432/97‑1 (MQ=255)
                                                            tCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCa                                      <  1:7180802/97‑1 (MQ=255)
                                                             cAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGGTTTTTTGTGATC‑AATTTTAAAAAAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCaa                                     >  1:13046152/1‑97 (MQ=255)
                                                              aGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGTTTTTTGTGATC‑AATTTCCAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAAt                                    >  1:16423170/1‑97 (MQ=255)
                                                               gCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGGGGGTTTTTTTTGATC‑AATTTCAAAATAAAAACAATGATCCGCTAAAAATAAAACAACGTTTCCAtt                                   >  1:11452919/1‑97 (MQ=255)
                                                                cTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTg                                  <  1:6127388/97‑1 (MQ=255)
                                                                cTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGGTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGGTTCAATTg                                  >  1:16947841/1‑97 (MQ=255)
                                                                    aaaaaTGAA‑CCATCGCCAACGGC‑GGTCGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGAtgt                              <  1:9476491/97‑1 (MQ=255)
                                                                     aaaaTGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGAtgtg                             <  1:10421818/97‑1 (MQ=255)
                                                                     aaaaTGAA‑CCATCGCCAACGGC‑GGGGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGAtgtg                             >  1:10970572/1‑97 (MQ=255)
                                                                      aaaTGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTgg                            <  1:18874551/97‑1 (MQ=255)
                                                                       aaTGAA‑CCATCGCCAACGGC‑GGGGGTTTTTTTGTGATC‑AATTTCAAAAAAAAAAAAATAATCAGATAAAAATAAAAAAGCGTTTCAATTGATGTGGt                           >  1:15733697/1‑97 (MQ=255)
                                                                        aTGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGtt                          <  1:14663612/97‑1 (MQ=255)
                                                                           aa‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTg                       <  1:7785166/97‑1 (MQ=255)
                                                                              ccATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGAt                     <  1:246000/97‑1 (MQ=255)
                                                                               cATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATc                    <  1:7495458/97‑1 (MQ=255)
                                                                               cATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATc                    <  1:6692490/97‑1 (MQ=255)
                                                                                  cGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACt                 <  1:16566816/97‑1 (MQ=255)
                                                                                  cGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACt                 <  1:4469208/97‑1 (MQ=255)
                                                                                    ccAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACttt               <  1:20964672/97‑1 (MQ=255)
                                                                                    ccAACGGC‑GGTGGTTGTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACttt               <  1:20220582/97‑1 (MQ=255)
                                                                                     cAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACtttt              <  1:10009312/97‑1 (MQ=255)
                                                                                       aCGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTAt            <  1:19715449/97‑1 (MQ=255)
                                                                                       aCGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTAt            <  1:14271076/97‑1 (MQ=255)
                                                                                        cggc‑ggTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTAtt           <  1:1860798/97‑1 (MQ=255)
                                                                                         ggc‑ggTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTg          <  1:12933948/97‑1 (MQ=255)
                                                                                         ggc‑ggTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTg          >  1:17327420/1‑97 (MQ=255)
                                                                                         ggc‑ggTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTg          <  1:14308501/97‑1 (MQ=255)
                                                                                         ggc‑ggTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTg          <  1:14507389/97‑1 (MQ=255)
                                                                                           c‑ggTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGAt        >  1:17687474/1‑97 (MQ=255)
                                                                                             ggtggtTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGAtt       <  1:10813766/97‑1 (MQ=255)
                                                                                             ggtggtTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGAtt       >  1:11913992/1‑97 (MQ=255)
                                                                                              gtggtTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTa      >  1:8298810/1‑97 (MQ=255)
                                                                                              gtggtTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTa      >  1:6195996/1‑97 (MQ=255)
                                                                                               tggtTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTaa     >  1:18267278/1‑97 (MQ=255)
                                                                                               tggtTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTaa     >  1:4008165/1‑97 (MQ=255)
                                                                                                ggtTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTaaa    >  1:5153594/1‑97 (MQ=255)
                                                                                                 gtTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAaat   >  1:3022850/1‑97 (MQ=255)
                                                                                                  tttttttGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAaatg  <  1:11536946/97‑1 (MQ=255)
                                                                                                  |                                                                                                 
GTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA‑CCATCGCCAACGGC‑GGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATG  >  NC_000913/4101411‑4101603

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑