Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,474,6890AG33.2% 397.7 / 64.6 190E189G (GAA→GGA) bdcRputative transcriptional regulator BdcR
Reads supporting (aligned to +/- strand):  ref base A (35/92);  new base G (63/0);  total (98/92)
Fisher's exact test for biased strand distribution p-value = 3.74e-25
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 248 total aligned reads displayed.

CTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGC  >  NC_000913/4474593‑4474784
                                                                                                |                                                                                               
cTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGa                                                                                                 <  1:10521044/97‑1 (MQ=255)
cTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGa                                                                                                 <  1:10367786/97‑1 (MQ=255)
  gATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAg                                                                                               >  1:18504904/1‑97 (MQ=255)
  gATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAg                                                                                               >  1:2748293/1‑97 (MQ=255)
   aTTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGc                                                                                              <  1:14426189/97‑1 (MQ=255)
    ttttATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAggg                                                                                             >  1:12791516/1‑95 (MQ=255)
    ttttATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCg                                                                                             >  1:1143829/1‑97 (MQ=255)
      ttATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGGGAt                                                                                           >  1:9773283/1‑97 (MQ=255)
      ttATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTATATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGAt                                                                                           <  1:3047999/97‑1 (MQ=255)
       tATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATa                                                                                          <  1:9633757/97‑1 (MQ=255)
       tATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATa                                                                                          <  1:18308916/97‑1 (MQ=255)
       tATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATa                                                                                          <  1:13934999/97‑1 (MQ=255)
        aTGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAATAGCTGCAATGGCGGGGGAAGCGATaa                                                                                         <  1:18221887/97‑1 (MQ=255)
        aTGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGAGaa                                                                                         >  1:19561205/1‑97 (MQ=255)
         tGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGGGGTaaa                                                                                        >  1:11551175/1‑97 (MQ=255)
             ttccGTTATGTCTGGGCTTCCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACt                                                                                    <  1:17914961/95‑1 (MQ=255)
             tACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGGTaaaaaac                                                                                    >  1:19178113/1‑95 (MQ=255)
             tACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACt                                                                                    <  1:9894504/97‑1 (MQ=255)
             tACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACt                                                                                    <  1:11225285/97‑1 (MQ=255)
              aCCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGGGGTAAAAACTa                                                                                   >  1:1134405/1‑97 (MQ=255)
              aCCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTa                                                                                   >  1:4282159/1‑97 (MQ=255)
               ccGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTAt                                                                                  <  1:20818035/97‑1 (MQ=255)
               ccGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTAt                                                                                  <  1:7334328/97‑1 (MQ=255)
                 gTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAACATTc                                                                                >  1:6748761/1‑97 (MQ=255)
                 gTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTc                                                                                <  1:5455357/97‑1 (MQ=255)
                 gTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTc                                                                                <  1:253278/97‑1 (MQ=255)
                  tGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCt                                                                               <  1:9178308/97‑1 (MQ=255)
                   gATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCtt                                                                              <  1:14010914/97‑1 (MQ=255)
                    aTGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTg                                                                             <  1:5262963/97‑1 (MQ=255)
                     tGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAAATATTCTTga                                                                            >  1:10273990/1‑97 (MQ=255)
                     ggTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTga                                                                            <  1:20384698/96‑1 (MQ=255)
                      gTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTgag                                                                           <  1:19425393/97‑1 (MQ=255)
                       tCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTgagg                                                                          <  1:11870531/97‑1 (MQ=255)
                         tGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATAATCTTtaggag                                                                        >  1:16046776/1‑97 (MQ=255)
                          gggCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGGGAAAAAAACTATTCTTGAAGAGt                                                                       >  1:15534250/1‑97 (MQ=255)
                          gggCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTgaggagn                                                                       <  1:15083573/97‑2 (MQ=255)
                           ggCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTg                                                                      <  1:14873754/97‑1 (MQ=255)
                             ttttCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCACCAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGAt                                                                    <  1:17223627/96‑1 (MQ=255)
                             cTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGAt                                                                    <  1:10335004/97‑1 (MQ=255)
                             cTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGAt                                                                    <  1:8000927/97‑1 (MQ=255)
                              tttCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATg                                                                   <  1:15791186/97‑1 (MQ=255)
                               ttCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGAGGAGGGATGc                                                                  >  1:4909406/1‑97 (MQ=255)
                               ttCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGc                                                                  <  1:15654975/97‑1 (MQ=255)
                                 cTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTCTTGAGGAGTGATGCgg                                                                >  1:17342198/1‑97 (MQ=255)
                                    cGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGGGGTAAAAAATATTATTGAGGGGTGATGCggggc                                                             >  1:6099297/1‑95 (MQ=255)
                                    cGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGGTAAAAAATATTCTTGAGGGGGGATGCggggc                                                             >  1:3344667/1‑95 (MQ=255)
                                    cGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTCTTTAGGGGGGATGCGGGcc                                                             >  1:13549212/1‑97 (MQ=255)
                                     gAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGAGAAAAAATATTCTTGAGGAGTGACGCGGGCCt                                                            >  1:10239592/1‑97 (MQ=255)
                                      aaGGCAGGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTCATGCGGGCCtt                                                           <  1:16796218/97‑1 (MQ=255)
                                        ggCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTTAGGAGGGATGCGGGCCCTGa                                                         >  1:13394735/1‑97 (MQ=255)
                                         gCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGAGGAGCGATGCGGGGCTTGAc                                                        >  1:18662661/1‑97 (MQ=255)
                                          cACGAGAGGGGCCCTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGAcc                                                       <  1:8443109/97‑1 (MQ=255)
                                           aCGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGTGGAGGGATGCGGGCCTTGGccc                                                      >  1:1238942/1‑97 (MQ=255)
                                           aCGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTCTTGAGGAGGGATGCGGGCCTTGAccc                                                      >  1:1076689/1‑97 (MQ=255)
                                           aCGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGAccc                                                      <  1:10938944/97‑1 (MQ=255)
                                             gagaGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGAcccca                                                    >  1:7635957/1‑95 (MQ=255)
                                              agagGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGGCTTGACCCGaa                                                   >  1:8385990/1‑97 (MQ=255)
                                              agagGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGAGGAGGGATGCGGGCCTTGACCCGaa                                                   >  1:10410953/1‑97 (MQ=255)
                                              agagGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTCTTGAGGAGTGATGCGGGGCTTGACCCGaa                                                   >  1:19848304/1‑97 (MQ=255)
                                               gagGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGaaa                                                  >  1:9411712/1‑97 (MQ=255)
                                                agGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGAGGGGTGATGCGGGCCTTGACCCGaaaa                                                 >  1:13819655/1‑96 (MQ=255)
                                                 ggggCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTTTTGAGGGGGGATGCGGGGCTTGACCCGAAAgg                                                >  1:5333353/1‑97 (MQ=255)
                                                 ggggCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGGGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTTAACCGGAAgg                                                >  1:14655524/1‑97 (MQ=255)
                                                 ggggCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAgg                                                <  1:18753671/97‑1 (MQ=255)
                                                 ggggCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAgg                                                <  1:2908422/97‑1 (MQ=255)
                                                  gggCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGc                                               <  1:15219002/97‑1 (MQ=255)
                                                   ggCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGGTAAAAACTATTTTTTAGGAGGGATGCGGGGCTTGTCCCGAAAgggg                                              >  1:14124552/1‑95 (MQ=255)
                                                      aCTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGACGAGGGATGGCGGCCTTGGCCCCAAAGGCgggg                                           >  1:2170477/1‑96 (MQ=255)
                                                      aCTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTCTTGAGGGGGGATGGGGGCCTTGACCCGAAAGGCgggg                                           >  1:19086510/1‑96 (MQ=255)
                                                       ctctATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTTAGGAGTGATGGGGGGCTTGACCCGAAAGGCgggga                                          >  1:13051385/1‑95 (MQ=255)
                                                        tctATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAAATATTCTTGAGGAGTGATGCGGGCCTTGACCCGCAAGGCGGGgaa                                         >  1:13905328/1‑97 (MQ=255)
                                                         ctATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGgaaa                                        >  1:2356145/1‑96 (MQ=255)
                                                          tataGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGGCTTGACCCGAAAGGCGGGgaaac                                       >  1:5630190/1‑95 (MQ=255)
                                                          tataGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAgc                                       <  1:16201058/97‑1 (MQ=255)
                                                          tataGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAgc                                       <  1:351258/97‑1 (MQ=255)
                                                          tataGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAgc                                       <  1:4603246/97‑1 (MQ=255)
                                                           ataGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGGTAAAAAATATTCTTGAGGAGGGGTGCGGGCCTTTACCCCAACGGCGGGgaaagg                                      >  1:1357040/1‑94 (MQ=255)
                                                           ataGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCCAAAAGCGGGGAAacg                                      >  1:16990081/1‑97 (MQ=255)
                                                           ataGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGAGGAGGGATGGGGGCCCTGACCCGAAAGGAGGGAAAacg                                      >  1:4828946/1‑97 (MQ=255)
                                                           ataGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGGCTTGACCCGAAAGGCGGGGAAgag                                      >  1:16463793/1‑95 (MQ=255)
                                                           anaGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGAAGAGGGATGGGGGCCTTGACCCAAAAAGCGGGGAAgac                                      >  1:8009921/1‑95 (MQ=255)
                                                             aGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGGTAAAAACTATTCTTGAGGGGTGATGCGGGCCTTGACCCGAAAGGCGGGCAAGCGcc                                    >  1:4156490/1‑97 (MQ=255)
                                                              gAACAACTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGAGGAGGGATGCGGGGCTTGACCCGAAAGGCGGGGAAAGGCCt                                   >  1:3782305/1‑97 (MQ=255)
                                                              gAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCt                                   <  1:5789137/97‑1 (MQ=255)
                                                               aacaacTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGGCTTGACCCGAAAGGCGGGGAAACGGCTg                                  >  1:14341357/1‑97 (MQ=255)
                                                               aacaacTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGGCTTGACCCGAAAGGCGGGAAAGCGcccg                                  >  1:2657242/1‑95 (MQ=255)
                                                               aacaacTCTGTGCAACAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAAGCGGGGAAGCGCCTg                                  >  1:12588471/1‑97 (MQ=255)
                                                                 caacTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGcc                                <  1:7535281/97‑1 (MQ=255)
                                                                   acTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGGAAGCGCccgccgg                              >  1:7017898/1‑96 (MQ=255)
                                                                    ctctGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGAt                             >  1:5102076/1‑97 (MQ=255)
                                                                      ctGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGGGATGCGGGGCTTGACCCGAAAGGCGGGAAAAGGCCCGCCGATaa                           >  1:4363548/1‑97 (MQ=255)
                                                                            aaCAGCTGCAATGGCGGGGGGAGCGATAAAAACTATTCTTGAGGAGTGATGAGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAATtgtg                     >  1:4706886/1‑97 (MQ=255)
                                                                                        ggCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACaataa         >  1:17519168/1‑97 (MQ=255)
                                                                                          cGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAAtt       >  1:18079041/1‑97 (MQ=255)
                                                                                           gggggAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTc      >  1:11819034/1‑97 (MQ=255)
                                                                                           gggggAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTc      >  1:17688611/1‑97 (MQ=255)
                                                                                            ggggAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCa     >  1:6362477/1‑97 (MQ=255)
                                                                                             gggAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCAc    >  1:1008813/1‑97 (MQ=255)
                                                                                             ggaaaGCAAAAAAATCTATTCTGGAGGAGTGATGCGGGCCTTGCCCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCAc    <  1:8894437/94‑1 (MQ=255)
                                                                                               gAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCAagc  >  1:14109034/1‑97 (MQ=255)
                                                                                                |                                                                                               
CTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGC  >  NC_000913/4474593‑4474784

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑