Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,568,5040TG45.2% 590.7 / 269.6 384T6P (ACC→CCC) mdtMmultidrug efflux pump/bile salt:H(+) antiporter/Na(+):H(+) antiporter/K(+):H(+) antiporter
Reads supporting (aligned to +/- strand):  ref base T (29/181);  new base G (173/0);  total (203/181)
Fisher's exact test for biased strand distribution p-value = 0.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 419 total aligned reads displayed.

AATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGA  >  NC_000913/4568409‑4568600
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 aTGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTaa                                                                                                   <  1:1169956/97‑1 (MQ=255)
  tGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTaaa                                                                                                  <  1:15388453/97‑1 (MQ=255)
  tGATCCCAGGCTGGATCAGATCCGTCGACAGATAAGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGaaa                                                                                                  >  1:1089482/1‑97 (MQ=255)
      cccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGgaaaaaa                                                                                              >  1:10518973/1‑97 (MQ=255)
       ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAAc                                                                                             <  1:5526518/97‑1 (MQ=255)
         aGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGt                                                                                           <  1:1213367/97‑1 (MQ=255)
         aGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGgaaaaaaaac                                                                                           >  1:11202082/1‑94 (MQ=255)
         aGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGagaaaaaaga                                                                                           >  1:10307504/1‑94 (MQ=255)
          ggCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGgaaaaaaaaag                                                                                          >  1:13203322/1‑93 (MQ=255)
            cTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGc                                                                                        <  1:16549884/97‑1 (MQ=255)
             tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGGAAAAAACCTCGCa                                                                                       >  1:17906513/1‑97 (MQ=255)
              ggATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCAt                                                                                      <  1:14344197/97‑1 (MQ=255)
              ggATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGGAAAAAAAGCGGCAt                                                                                      >  1:15001823/1‑97 (MQ=255)
               gATCAGATCGGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCAGCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATa                                                                                     <  1:12976410/97‑1 (MQ=255)
               gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGGAAAAAAACG‑GGCATa                                                                                     >  1:15153936/1‑97 (MQ=255)
               gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATa                                                                                     <  1:3660500/97‑1 (MQ=255)
               gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGAGGGATa                                                                                     >  1:18134384/1‑97 (MQ=255)
                 tCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATaac                                                                                   <  1:19539733/97‑1 (MQ=255)
                   aGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAACGGGCATaaa‑aa                                                                                >  1:2881313/1‑97 (MQ=255)
                    gATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGGAAAAAACAGGGCATaac‑aaa                                                                               >  1:8402937/1‑97 (MQ=255)
                     aTCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATaac‑aaac                                                                              <  1:15192599/97‑1 (MQ=255)
                     aTCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGGAAAAAAAATGGGCTaac‑aaac                                                                              >  1:10809918/1‑97 (MQ=255)
                      tCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGAGGCATaaa‑aaaca                                                                             >  1:17758959/1‑97 (MQ=255)
                       ccGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAac‑aaacaa                                                                            <  1:20005422/97‑1 (MQ=255)
                       ccGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGGAAAAAACAGGGGATCac‑aaaaaa                                                                            >  1:7825865/1‑97 (MQ=255)
                        cGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑Aaacaac                                                                           <  1:17572060/97‑1 (MQ=255)
                         gTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACt                                                                          <  1:7122632/97‑1 (MQ=255)
                          tCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTc                                                                         <  1:13466783/97‑1 (MQ=255)
                           cGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTcc                                                                        <  1:13109062/97‑1 (MQ=255)
                           cGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGTGGCATAAC‑AAAACACTcc                                                                        >  1:11632294/1‑97 (MQ=255)
                              cAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTg                                                                     <  1:10624567/97‑1 (MQ=255)
                              cAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTg                                                                     <  1:12663053/97‑1 (MQ=255)
                              cAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAACGTGGCATAAC‑AAACAACACCTTg                                                                     >  1:10369157/1‑97 (MQ=255)
                               aGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGt                                                                    <  1:19269762/97‑1 (MQ=255)
                                gATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑c                                                                  <  1:7003958/97‑1 (MQ=255)
                                 aTACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑cc                                                                 <  1:462019/97‑1 (MQ=255)
                                 aTACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGGAAAAAACGGGGGACAAC‑AAAAAAATCCCTTT‑cc                                                                 >  1:11306473/1‑97 (MQ=255)
                                  tACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCg                                                                <  1:9841739/97‑1 (MQ=255)
                                  tACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGGAAAAAAAGGGGGAAAAC‑AAAAAAAACCTTGT‑TCg                                                                >  1:4798457/1‑97 (MQ=255)
                                   aCGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGTGGCATAAC‑AAACAACTCCCTGT‑CCgg                                                               >  1:8702078/1‑97 (MQ=255)
                                     gcagcaAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAATGGGATAAC‑AAACAACACCTTTT‑CCgggg                                                             >  1:6637907/1‑95 (MQ=255)
                                      cagcaAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGGAAAAAAAGTGGGATAAA‑AAACAAATCCTTGT‑CCGgaga                                                            >  1:4364509/1‑97 (MQ=255)
                                        gcaAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGGAAAAAAAGCGGGATAAA‑AAAAAACTCCTTGT‑CCGGAGAAc                                                          >  1:13826107/1‑97 (MQ=255)
                                        gcaAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGTGGGATAAA‑AAACAACTCCCTTT‑CCCGAGaaa                                                          >  1:14146212/1‑96 (MQ=255)
                                        gcaAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGTGGCATAAC‑AAAAAAATCCCTGT‑CCCGGGaaa                                                          >  1:1806691/1‑96 (MQ=255)
                                          aaaGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGTGGCCTAAA‑AAACAACCCCTTGTCCCGGAGAccc                                                         >  1:6134392/1‑97 (MQ=255)
                                          aaaGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGTGGCATAAC‑AAAAAACTCCTTTG‑CCGGAGAAacc                                                        >  1:16946417/1‑97 (MQ=255)
                                           aaGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAAcccc                                                       <  1:11053520/97‑1 (MQ=255)
                                           aaGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGTGGGGTAAC‑AAAAAAATCCTTGT‑CCCGAGAAcccc                                                       >  1:7654710/1‑97 (MQ=255)
                                           aaGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGGGGGATAAC‑AAACAACTCCCTTT‑CCGGGGAAaccc                                                       >  1:13291330/1‑97 (MQ=255)
                                            aGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GTGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCa                                                      <  1:21094066/97‑1 (MQ=255)
                                            aGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGGGGCATAAC‑AAACAACTCCTTGT‑CCCGAGAAACCCa                                                      >  1:8048369/1‑97 (MQ=255)
                                               cATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑g                                                  <  1:1550024/97‑1 (MQ=255)
                                               cATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGAGGCATAAC‑AAACAAATCCTTGT‑CCGGAGAAACCCACC‑g                                                  >  1:2732947/1‑97 (MQ=255)
                                                aTACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAACGTGGCATAAA‑AAAAAACTCCTTGT‑CCGGAGAACCCCAAC‑gg                                                 >  1:3765637/1‑97 (MQ=255)
                                                 tACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑ggg                                                <  1:6518192/97‑1 (MQ=255)
                                                 tACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑ggg                                                <  1:6728758/97‑1 (MQ=255)
                                                 tACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGTGGGATAAC‑AAAAAAACCCTTGT‑CCGGAGAACCCCAAC‑ggg                                                >  1:20205556/1‑97 (MQ=255)
                                                  aCAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTGAAAAAAAGGGGGATAAA‑AAACAACTCCTTGT‑CCGGAGAAACCCCAC‑gggg                                               >  1:5049751/1‑97 (MQ=255)
                                                    aaaaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGaa                                             <  1:9336613/97‑1 (MQ=255)
                                                    aaaaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGTGGCATAAC‑AAAAAACTCCCTGT‑CCGGAGAACCCCCAC‑GGGGaa                                             >  1:14712237/1‑97 (MQ=255)
                                                     aaaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAACGTGGCATAAC‑AAAAAACTCCCTTT‑CCCGAGAACCCCAAC‑CGGGaaa                                            >  1:3103616/1‑97 (MQ=255)
                                                     aaaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGTGGGATAAC‑AAACAAATCCTTGT‑CCGGAGAAACCCCAC‑GGGGgaa                                            >  1:950562/1‑97 (MQ=255)
                                                      aaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAACGGGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAAACCCAAC‑GGGGgaaa                                           >  1:20317008/1‑97 (MQ=255)
                                                       aTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAACGGGGC‑TAAC‑AAAAAACTCCTTAT‑CCGGAGGACCCCAAC‑GGGGGAAAc                                          >  1:5151005/1‑97 (MQ=255)
                                                       aTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGGGGCCTAAC‑AAACAACTCCTTGT‑CCGGAGAAACCCAAC‑GGGGGAAAc                                          >  1:19013503/1‑97 (MQ=255)
                                                        tCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGTGGCATAAA‑AAAAAAATCCTTGT‑CCCGAGAACCCCAAC‑CGGGGAAACg                                         >  1:2416380/1‑97 (MQ=255)
                                                         cAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAACGGGGCCTAACAAAACAAC‑CCTTTT‑CCCGAGAACCCCAAA‑CGGGGAAACGa                                        >  1:4139586/1‑97 (MQ=255)
                                                         cAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGTGGGATAAC‑AAAAAACTCCTTGT‑CCCGAGAACCCCAAC‑CGGGGAAACGa                                        >  1:6788108/1‑97 (MQ=255)
                                                          aaCGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGaa                                       <  1:12300305/97‑1 (MQ=255)
                                                             gCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAAtt                                    <  1:34579/97‑1 (MQ=255)
                                                             gCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGGAAAAAACGGGGGATAAC‑AAAAAAATCCTTGT‑CCGGAGAACCCCAACGGGGGAAAACAAAAt                                     >  1:19845361/1‑97 (MQ=255)
                                                             gCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGGAAAAAAAGTGGCATAAA‑AAAAAACTCCTTGT‑CCGGGGAAACCCAAC‑GGGGGAAACGaaaat                                    >  1:12635947/1‑95 (MQ=255)
                                                             gCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGTGGGATAAC‑AAAAAAATCCTTTT‑CCCGAGAAACCCAAC‑CGGGGAAAAGaaaat                                    >  1:13617511/1‑95 (MQ=255)
                                                              ccATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCCAC‑CGGGGAAAAGAAAATc                                   >  1:15892692/1‑97 (MQ=255)
                                                               cATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCa                                  <  1:18426288/97‑1 (MQ=255)
                                                               cATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCa                                  <  1:8292703/97‑1 (MQ=255)
                                                                aTCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAACGGGGCATAAC‑AAAAAACCCCTTGT‑CCGGAGAACCCCCAC‑GGGGGAAAAGAAATTCaa                                 >  1:12586743/1‑97 (MQ=255)
                                                                    ggAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATAcc                             <  1:5762098/97‑1 (MQ=255)
                                                                     gAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATACCg                            <  1:6329868/97‑1 (MQ=255)
                                                                       aaaaCAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATACCGTc                          <  1:7364589/97‑1 (MQ=255)
                                                                          aCAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATACCGTCggn                       <  1:20500411/97‑2 (MQ=255)
                                                                          aCAGCGTGGCGGCATGGC‑GGGGAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGGAAACGAAATTCAATACcggcggg                       >  1:14844555/1‑96 (MQ=255)
                                                                          aCAGCGTGGCGGCATGGC‑GGGGAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATACCGTCggg                       >  1:10060444/1‑96 (MQ=255)
                                                                          aCAGCGTGGCGGCATGGC‑GGGGAAAAAAACGTGGCATAAC‑AAAAAACTCCTTGT‑CCGGAGAAACCCAAC‑GGGGAAAACGAAATTCAATAACGTCggg                       >  1:4268511/1‑96 (MQ=255)
                                                                             gCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATACCGTCGGTAAt                    <  1:8940470/97‑1 (MQ=255)
                                                                             gCGTGGCGGCATGGC‑GGGGAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATACCGTCGGGAAt                    >  1:20868642/1‑97 (MQ=255)
                                                                                   cggcATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATACCGTCGGTAATGACGaa              <  1:3971900/97‑1 (MQ=255)
                                                                                     gcATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAg            <  1:11939465/97‑1 (MQ=255)
                                                                                      cATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAgg           <  1:18761761/97‑1 (MQ=255)
                                                                                       aTGGC‑GGGGAAAAAAACGTGGCATAAC‑AAAAAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATACCGTCGGGAATGACGAAAAGc          >  1:9620616/1‑97 (MQ=255)
                                                                                         ggC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAg        >  1:4508102/1‑97 (MQ=255)
                                                                                         ggC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAg        <  1:1606938/97‑1 (MQ=255)
                                                                                           c‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGt      >  1:3225565/1‑97 (MQ=255)
                                                                                           c‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGt      >  1:17297205/1‑97 (MQ=255)
                                                                                           c‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGt      <  1:9118142/97‑1 (MQ=255)
                                                                                           c‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGt      >  1:16788304/1‑97 (MQ=255)
                                                                                             gggTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTg     <  1:1148684/97‑1 (MQ=255)
                                                                                               gTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTgag   <  1:16257718/97‑1 (MQ=255)
                                                                                                tAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTgaga  >  1:13959847/1‑97 (MQ=255)
                                                                                                |                                                                                                   
AATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAAC‑AAACAACTCCTTGT‑CCGGAGAACCCCAAC‑GGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGA  >  NC_000913/4568409‑4568600

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑