| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 876,869 | C→G | H82D (CAT→GAT) | amtB → | ammonium transporter AmtB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 876,869 | 0 | C | G | 98.3% | 3828.3 / NA | 967 | H82D (CAT→GAT) | amtB | ammonium transporter AmtB |
| Reads supporting (aligned to +/- strand): ref base C (1/0); major base G (439/507); minor base A (1/15); total (443/524) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.39e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 967 total aligned reads displayed.
GTAAAAATGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTACATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTACTTTT > AM406671/876723‑877014 | tAAAAATGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGata < 1:6880716/149‑1 (MQ=255) aaaaaTGTATTTAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGatat < 1:10128207/149‑1 (MQ=255) aaaaaTGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTACTTATGGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTGTGATTGGTGTAGatat > 1:10007348/1‑149 (MQ=255) aTGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTTGCTTCCATTTTATTGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGcc < 1:8269447/149‑1 (MQ=255) aTGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTTGATATAATAATTGGATTGGAAATTTTGACCATTTGTTTATGAATTGTGTATATATTGct > 2:7287871/1‑148 (MQ=255) aTGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGcc > 1:4130165/1‑149 (MQ=255) tATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATGATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCaaa < 1:3525356/149‑1 (MQ=255) aTTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCaaaa < 2:7988612/149‑1 (MQ=255) gAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAAtt < 1:9297627/149‑1 (MQ=255) aTACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCa < 1:10437044/149‑1 (MQ=255) aaTGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCattat < 1:8603220/149‑1 (MQ=255) aaTGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCattat < 2:6170071/149‑1 (MQ=255) tgatgTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCt < 1:648296/149‑1 (MQ=255) gatgTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTCGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTg < 2:5874414/149‑1 (MQ=255) atgTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGc < 2:2205677/149‑1 (MQ=255) ggcctttgCTCCTATGACTCTGGGTTCCATTTTATAGGTAATTATTAGCTTTTCAATTAATTTTTCTCGAAATAATAGTTGCATCCGAAATTTTGACCATTTGTTTATTAATGGTGTAAAAAAAAAAAAAAATTCATTATTTCCTGCCa < 2:8074358/142‑1 (MQ=255) cATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTGATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAAt > 1:375241/1‑149 (MQ=255) cATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAAt > 1:8903256/1‑149 (MQ=255) aTTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGATTGGTGTAGATATGGCTGAAAATTCATTATTTCCTGCCAATc > 2:4208820/1‑149 (MQ=255) tGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATcac < 2:5191254/149‑1 (MQ=255) tCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTACATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTc < 2:1256438/149‑1 (MQ=255) ccAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATCTGGGCGGAAATTGATTATTTCATGACAATCACATTcc > 2:7423348/1‑149 (MQ=255) cAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCt > 1:3332064/1‑149 (MQ=255) cAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCt < 2:8776052/149‑1 (MQ=255) aaTGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTGCCTGCCAATCACATTCCTg > 1:5153980/1‑149 (MQ=255) aTGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGa < 1:2532381/149‑1 (MQ=255) aTGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGa < 2:3535094/149‑1 (MQ=255) tctGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGcc < 1:6660739/149‑1 (MQ=255) gCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCTAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCtttt > 2:14736/1‑149 (MQ=255) ttCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCAtttttt > 2:460508/1‑149 (MQ=255) tCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTc < 1:5897719/149‑1 (MQ=255) ccATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCt > 1:2291833/1‑149 (MQ=255) cATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCaaa < 2:7748374/103‑1 (MQ=255) cATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTg < 1:5481078/149‑1 (MQ=255) cATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTg > 1:8790884/1‑149 (MQ=255) cATTTTATGGGTAATTATTGGCTTTGCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTg < 2:1822216/149‑1 (MQ=255) aTTTTATGGGTAATTATCGGCTTTTCCTTTTCTTTTTCTGGAAATCATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTCCCAATCACATTCCTGACGGCCTTTTTTCTgg < 1:8428492/149‑1 (MQ=255) ttttATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATCTGGCTAGTCGTTCATTATTTCATAAAAAAAAAATTCCTGACGGCCTTTTTTTTGGt > 2:929736/1‑149 (MQ=255) tttATTGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGtt < 2:7205544/149‑1 (MQ=255) tttATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGtt > 1:7262970/1‑149 (MQ=255) ttATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGttt < 1:4756619/149‑1 (MQ=255) ttATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGttt < 2:8474490/149‑1 (MQ=255) tGGGTAATTATTGGCTTTTCATTTTCTTTTTCTTGAAATATTAGTTGGATTTGTTATTTTGACCATTTGTTTTTGAATGTTGTAGATATTGCCATAAATTCTTTCTTTCCTTCTAATCACATTCCTGTCTGCCTCTTTTCTTGTTTTCa > 2:9481467/1‑149 (MQ=255) tGGGTAAATATTGGCTTTTCAGTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTAGTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCa < 2:3344445/149‑1 (MQ=255) gggTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAg < 2:8343166/149‑1 (MQ=255) ggTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAga > 2:8870583/1‑149 (MQ=255) ggTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAga < 1:1825497/149‑1 (MQ=255) tAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAgatg > 1:7640644/1‑149 (MQ=255) tAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAgatg < 1:9676742/149‑1 (MQ=255) aaTTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAgatga < 2:2021212/149‑1 (MQ=255) aaTTATTGGCTTTTCAGTTTCTTTTTCTGGAAATAATAGTTTTATCGGTAATTTTGACCATTTGTTTATGAATGGTGTATATATGGCCAAAAATTCATTTTTTCCTGCCAATCACATTCCTGATGGCCTTTTTTCTGGGTTTCAgatga < 2:5730972/149‑1 (MQ=255) attattGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAgatgat < 1:4377175/149‑1 (MQ=255) tttGGCTTTTCATTTTCTTTTTCTGGATATAATAGTTGGATTGTAAATTTTTACCATTTGTTTATGAATTGTGTAGATATGGCCAAAAATTTATTTTTTCCTGTCAATCACTTTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGtt < 2:7580480/148‑1 (MQ=255) attGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGtt < 1:3996277/149‑1 (MQ=255) attGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGtt < 1:7800349/149‑1 (MQ=255) ggCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTc > 2:2856516/1‑149 (MQ=255) ggCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTc > 2:6297180/1‑149 (MQ=255) gCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCg > 2:4070023/1‑149 (MQ=255) gCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCg < 2:5551951/149‑1 (MQ=255) gCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCg > 1:9466800/1‑149 (MQ=255) gCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCg > 1:79973/1‑149 (MQ=255) ttCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGatta > 2:4369124/1‑149 (MQ=255) cATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGattatt < 2:9806533/149‑1 (MQ=255) tttctttttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACg > 1:1330745/1‑149 (MQ=255) ttctttttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACgg < 1:10294522/149‑1 (MQ=255) tctttttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGt < 2:10311051/149‑1 (MQ=255) ctttttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTc > 1:2805557/1‑149 (MQ=255) ttttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGc > 2:3808954/1‑149 (MQ=255) tttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCt < 1:7103678/149‑1 (MQ=255) ttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCtt < 2:2677192/149‑1 (MQ=255) tctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATCTCGCTGGAAGCCGATTCTTTCATACAAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCttt > 2:6565657/1‑149 (MQ=255) ggAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGAt > 2:2491400/1‑149 (MQ=255) ataataGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACa < 2:601378/149‑1 (MQ=255) taataGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAg > 1:9047055/1‑149 (MQ=255) aataGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAgg < 2:6669788/149‑1 (MQ=255) taGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCt > 1:4935695/1‑149 (MQ=255) aGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATCGGTAGAAATTCAATATTTAAAGAAAAAAACATTCCTGACGGCCTTTTTTCTGGTTTTAAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTc > 2:10033414/1‑149 (MQ=255) ttggattggaAATTTTGACCATTTGTTTATGAATGGTGTAGATCTCGGTGGGCGTTGTATCTTTAAAGACAATAACATTCCTGGCGGCCTTCTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTAGCTTTCATTACAGGCTCgg > 2:1089930/1‑149 (MQ=255) tggattggaAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGt < 2:4806918/149‑1 (MQ=255) tggattggaAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGt < 1:152398/149‑1 (MQ=255) tggaAATTGTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTg < 1:6043845/149‑1 (MQ=255) ggaAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTgg < 2:9001025/149‑1 (MQ=255) ttGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATg > 1:2995122/1‑149 (MQ=255) ccATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGAt > 2:3110144/1‑149 (MQ=255) cATTTGTTTATGAATGGTGTAGATATCGCCGAACACTGATTCTTTCATACAAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGTATGAGAtt > 2:8221664/1‑149 (MQ=255) tttGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTa > 1:264661/1‑149 (MQ=255) tGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACt < 2:6992942/149‑1 (MQ=255) tGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACt < 2:1704136/149‑1 (MQ=255) tGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACt > 1:1651896/1‑149 (MQ=255) gTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAAGCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTc < 1:1084371/149‑1 (MQ=255) tttATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTcc < 1:987621/149‑1 (MQ=255) tGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTAtt > 1:4533031/1‑149 (MQ=255) gAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTc < 2:9376320/149‑1 (MQ=255) gAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTc < 2:10194918/149‑1 (MQ=255) tGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTAc < 1:2043903/149‑1 (MQ=255) tGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTAc < 1:6297180/149‑1 (MQ=255) tGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTAc < 1:8103351/149‑1 (MQ=255) ggTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTACt > 1:5283055/1‑149 (MQ=255) ggTGTAGATATGGCCAAAAATTCATTATNTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGGTGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAAATTTACTCCTATTCTACt > 1:5780192/1‑149 (MQ=255) tgtAGATATGGCCAAGAATGCATTATTTCCTGCCAATCGCATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTGTTCGATTATTACGGGCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTGCTCCTCTTCTACttt < 2:6818767/149‑1 (MQ=255) | GTAAAAATGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTACATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTACTTTT > AM406671/876723‑877014 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |