| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 1,731,090 | T→C | G335G (GGA→GGG) | llmg_1749 ← | putative membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 1,731,090 | 0 | T | C | 99.8% | 4498.1 / NA | 1076 | G335G (GGA→GGG) | llmg_1749 | putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); major base C (518/555); minor base A (1/1); total (519/557) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 1094 total aligned reads displayed.
AATCAGTAAAATTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAATCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAATTGAAATTC > AM406671/1730944‑1731235 | aTCAGTAAAATTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCa < 2:7197605/149‑1 (MQ=255) aTCAGTAAAATTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCa > 1:200549/1‑149 (MQ=255) gTAAAATTTATAGGATCAACGGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATTGCCGAAATAATCGTTTGTAATAACCCATGAt < 2:5455637/149‑1 (MQ=255) aTTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGa < 1:2858828/149‑1 (MQ=255) aaTAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCa < 1:9676327/149‑1 (MQ=255) aaTAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCa < 1:2726915/149‑1 (MQ=255) tAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAAc > 2:158905/1‑149 (MQ=255) aGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAAcc > 1:7681997/1‑149 (MQ=255) ggATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTTATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCg < 1:6412372/149‑1 (MQ=255) cAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGc > 1:487616/1‑149 (MQ=255) cagTGCACTCATAAAGAAATCTCCTGTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGCAAACAGCGGCTATTCACACAGCTAACACGACTCCAATGGCCCAAATAATCGTTTTTAATAACCCAAGATTAAGACCAACCGTTGCacc < 2:6063550/148‑3 (MQ=255) agTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAata < 1:6115712/149‑1 (MQ=255) ttCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGAc > 1:8364920/1‑149 (MQ=255) tCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCACTATAAGaaa > 2:1147965/1‑147 (MQ=255) tCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGAcc > 2:4352155/1‑149 (MQ=255) tCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGAcc > 1:1127958/1‑149 (MQ=255) cATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCa < 2:4678408/149‑1 (MQ=255) aTAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCaa < 1:3492915/149‑1 (MQ=255) aTAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCaa > 1:8593208/1‑149 (MQ=255) tAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAg < 1:6251588/149‑1 (MQ=255) tAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAg < 2:5198691/149‑1 (MQ=255) aaaGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGa > 2:1874241/1‑149 (MQ=255) aaGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGaa < 1:7504745/149‑1 (MQ=255) aaGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGaa < 2:2386637/149‑1 (MQ=255) aaGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGaa > 2:8674816/1‑149 (MQ=255) aGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAAt > 2:2730705/1‑149 (MQ=255) ctctCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTcc > 1:3162168/1‑149 (MQ=255) ctctCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTcc > 2:7586768/1‑149 (MQ=255) tctcCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCa < 2:9567922/149‑1 (MQ=255) tctcCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCa > 1:9780035/1‑149 (MQ=255) tcctttccttGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCAtt > 2:5033116/1‑149 (MQ=255) tcatttccttGATGATTTCTAGTCAAAGCAAAACTTGCGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCAtt < 2:5855135/146‑1 (MQ=255) gatgatTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTGTCaataat > 1:6046035/1‑149 (MQ=255) gatgatTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCaataat > 2:6726020/1‑149 (MQ=255) atgatTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAataata < 1:4253721/149‑1 (MQ=255) atgatTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAataata > 2:252569/1‑149 (MQ=255) tgatTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAAtaataa < 1:3370877/149‑1 (MQ=255) tgatTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAAtaataa < 1:9317916/149‑1 (MQ=255) tgatTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAAtaataa < 2:8561162/149‑1 (MQ=255) gatTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATaaa > 2:383940/1‑149 (MQ=255) ttCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGc > 2:9850059/1‑149 (MQ=255) tCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCg < 2:3046158/149‑1 (MQ=255) tCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCg < 1:1000575/149‑1 (MQ=255) tCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATc < 1:829129/149‑1 (MQ=255) aaGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGc > 2:6883486/1‑149 (MQ=255) aaGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGc > 1:5404835/1‑149 (MQ=255) aaGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGc < 2:2183765/149‑1 (MQ=255) aGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCa < 1:4732082/149‑1 (MQ=255) cAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCaaa < 1:5206082/149‑1 (MQ=255) aaaaCTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAg < 1:7329449/149‑1 (MQ=255) aaaCTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGt < 2:9024492/149‑1 (MQ=255) aaCTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGGAATAATGGTTTGTAATAACCCGAGATTAAGACCTACGGTTGCAATATAAGACCAAGAATTTCAATTTCTCAATGATAAAAGCGTCATCGGCAAAGtt > 1:8146349/1‑149 (MQ=255) aaCTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGtt > 2:10220204/1‑149 (MQ=255) aCTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAGTCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGGCCAAGGATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGttt < 2:8322492/149‑1 (MQ=255) aCTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGttt < 2:1336578/149‑1 (MQ=255) aCTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGttt > 1:4077914/1‑149 (MQ=255) cTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTc > 1:4553412/1‑149 (MQ=255) tgtgAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCg > 2:4232906/1‑149 (MQ=255) gtgAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGc > 1:3801997/1‑149 (MQ=255) tgAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGcc > 2:2093406/1‑149 (MQ=255) tgAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGcc < 1:10351091/149‑1 (MQ=255) aaaaCAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCAt < 1:6961616/149‑1 (MQ=255) aaaCAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATg > 2:9753235/1‑149 (MQ=255) aaaCAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATg < 1:10115838/149‑1 (MQ=255) aaaCAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATg < 1:7103096/149‑1 (MQ=255) aaaCAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATg < 1:391093/149‑1 (MQ=255) aaCAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGa > 2:9407421/1‑149 (MQ=255) cAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGaaa < 2:7868417/149‑1 (MQ=255) agcattAATTGGCACAGCAAACACGTCTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAAATTCCATTTCTCAATAATAAACGCGTCATCGGCAAAGTTTCCGCCATGaaaa < 1:5856672/144‑1 (MQ=255) gCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAATCGTCATCGGCAAAGTTTCCGCCATGAAAAt > 2:7965918/1‑149 (MQ=255) gCGGGAATTGGCACAGCTAACACGATTCCAAGGGCCGAAATAATCGTTTGTCATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATATCCCTTCCTCAATAATAAAAGCATCATCGGCGAAGTTTCCGTCATGAAAAt > 2:8809367/1‑149 (MQ=255) ggTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCa > 1:1494398/1‑149 (MQ=255) aTTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGaa > 2:704311/1‑149 (MQ=255) tGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACa < 1:1615597/149‑1 (MQ=255) tGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACa > 2:4887076/1‑149 (MQ=255) caGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACa < 2:8175054/149‑1 (MQ=255) aGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACAt > 2:4061522/1‑149 (MQ=255) gCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACAtt > 1:9459100/1‑149 (MQ=255) ttCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGtt > 2:10053127/1‑149 (MQ=255) ttCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGtt < 1:4980143/149‑1 (MQ=255) ttCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGtt > 2:6319143/1‑149 (MQ=255) tCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCCGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTc > 2:3312574/1‑149 (MQ=255) aTGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAAt < 2:6500504/149‑1 (MQ=255) tGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATg > 1:562226/1‑149 (MQ=255) tGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATg < 2:7462535/149‑1 (MQ=255) ggCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGa < 1:9044337/149‑1 (MQ=255) gCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAg > 1:2469211/1‑149 (MQ=255) ccGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGc < 1:8743783/149‑1 (MQ=255) cGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGct < 2:3515370/149‑1 (MQ=255) gAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGctc < 2:9262350/149‑1 (MQ=255) ataatCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTg < 2:4528169/149‑1 (MQ=255) taatCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGc > 2:5319049/1‑149 (MQ=255) atCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGcct > 1:666050/1‑148 (MQ=255) cGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCaa > 2:5681216/1‑149 (MQ=255) cGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCaa < 1:8876966/149‑1 (MQ=255) cGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCaa < 1:7878971/149‑1 (MQ=255) tttGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAAtt < 1:2310477/149‑1 (MQ=255) tttGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAAtt < 1:1818798/149‑1 (MQ=255) tttGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAAtt < 1:1337830/149‑1 (MQ=255) gTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAATTgca > 1:9979078/1‑147 (MQ=255) | AATCAGTAAAATTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAATCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAATTGAAATTC > AM406671/1730944‑1731235 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |