| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 2,044,751 | G→A | A37V (GCA→GTA) | ftsA ← | cell division protein ftsA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 2,044,751 | 0 | G | A | 99.9% | 4408.8 / NA | 1133 | A37V (GCA→GTA) | ftsA | cell division protein ftsA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (622/510); minor base C (0/1); total (622/511) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 1133 total aligned reads displayed.
TTTCGAGGGAATTTGCTGGAATGCTCACGTTAATTCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTGCGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCTCACACATCACGATTCAT > AM406671/2044605‑2044896 | ttCGAGGGAATTTGCTGGAATGCTCACGTTAATTCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGt < 2:625727/149‑1 (MQ=255) cGAGGGAATTTGCTGGAATGCTCACGTTAATTCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGttt < 2:5063409/149‑1 (MQ=255) cGAGGGAATTTGCTGGAATGCTCACGTTAATTCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGttt < 1:5100117/149‑1 (MQ=255) cGAGGGAATTTGCTGGAATGCTCACGTTAATTCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGttt < 1:4222167/149‑1 (MQ=255) cGAGGGAATTTGCTGGAATGCTCACGTTAATTCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGttt < 2:8125529/149‑1 (MQ=255) aGGGAATTTGCTGGAATGCTCACGTTAATTCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTcc < 1:4064825/149‑1 (MQ=255) gggAATTTGCTGGAATGCTCACGTTAATTCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCg > 1:6194430/1‑149 (MQ=255) gAATTTGCTGGAATGCTCACGTTAATTCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGac < 1:10349508/149‑1 (MQ=255) aTTTGCTGGAATGCTCACGTTAATTCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGacac < 2:1302994/149‑1 (MQ=255) ttGCTGGAATGCTCACGTTAATTCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCa < 2:2682/149‑1 (MQ=255) tGCTGGAATGCTCACGTTAATTCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCaa < 1:5482524/149‑1 (MQ=255) gCTGGCATGCTCACGTTAATTCGATCAAGCGTGATTCCGGCGCGTTCTTCAGCAGCAGTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACTATACTTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACCCCAAt < 2:2063723/149‑1 (MQ=255) gCTGGAATGCTCACGTTAATTCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAAt < 2:4610304/149‑1 (MQ=255) gCTGGAATGCTCACGTTAATTCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAAt < 1:2997710/149‑1 (MQ=255) tGGAATGCTCACGTTAATTCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATta > 1:9054577/1‑149 (MQ=255) tGGAATGCTCACGTTAATTCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATta > 1:8345057/1‑149 (MQ=255) aTGCTCACGTTAATTCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATAtt > 1:4795771/1‑149 (MQ=255) gCTCACGTTAATTCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCa > 2:516680/1‑149 (MQ=255) tAATTCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCt > 1:7468495/1‑149 (MQ=255) tAATTCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCt > 2:1794803/1‑149 (MQ=255) ttCGATCAATCGTGATTCCGGCGGCATCTTCAGCAGCATTTACAGCTTTACGGAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTGACCTgag > 2:5701343/1‑149 (MQ=255) ttCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCGACACTAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTgag < 2:6599041/149‑1 (MQ=255) tCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTgaga < 2:7977859/149‑1 (MQ=255) tCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTgaga > 1:2069969/1‑149 (MQ=255) tCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTgaga > 1:95232/1‑149 (MQ=255) tCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGTTTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGATGTa > 1:274265/1‑149 (MQ=255) tCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTa > 2:899894/1‑149 (MQ=255) tCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCCTCTCAATATCTCCAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTa > 1:3537067/1‑149 (MQ=255) cAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTAt < 1:6055075/149‑1 (MQ=255) cAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTAt < 2:7240007/149‑1 (MQ=255) aaTCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTAtt < 1:3697655/149‑1 (MQ=255) accGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCTTAATGCTTGTGCTACCCTCTCAATATCTACAATAATTCCATTTTTAAGGCCTTCGGATTGTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTc < 2:7559181/147‑1 (MQ=255) tCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCa > 1:1101928/1‑149 (MQ=255) gTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTTTGGCCATTTGATTTTACGTTTCCGCCACCACTTATATTCATTTCACCTGAGACGTATTTAGc > 2:5958546/1‑149 (MQ=255) gTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTc > 1:7173109/1‑146 (MQ=255) tGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGca < 1:2280539/149‑1 (MQ=255) gATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGAGACCAATTATATTCATTTCACCTGAGACGTATTCAGcaa > 1:6417127/1‑149 (MQ=255) aTTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGcaac < 1:1663296/149‑1 (MQ=255) ttCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGcaaca > 2:3842399/1‑149 (MQ=255) tCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGcaacaa > 1:8588051/1‑149 (MQ=255) ccGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAg > 2:6084292/1‑149 (MQ=255) ccGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAg < 2:3134169/149‑1 (MQ=255) gcgcGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCAc > 1:4918296/1‑149 (MQ=255) cgcgTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCAcc < 2:1568338/149‑1 (MQ=255) gcgTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCt < 2:5436442/149‑1 (MQ=255) gTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGcaacaa > 1:8029610/1‑141 (MQ=255) ttcttcAGCAGCATTTACAGAATTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTa > 2:8542612/1‑149 (MQ=255) cagcagCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATtgtg < 2:1705485/149‑1 (MQ=255) agcaTTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTg < 1:1226612/149‑1 (MQ=255) ttACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTATTTCTTTTGTATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCg > 2:9365618/1‑149 (MQ=255) ttACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCg < 1:6978079/149‑1 (MQ=255) aCAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGat < 2:5807827/149‑1 (MQ=255) ttttCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTa > 2:8320224/1‑149 (MQ=255) ttCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACg > 1:9374336/1‑149 (MQ=255) tAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTg < 1:569955/149‑1 (MQ=255) cTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATaa > 2:2410982/1‑149 (MQ=255) ttGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATaaa > 2:3657936/1‑149 (MQ=255) aCCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACt > 1:7309778/1‑149 (MQ=255) aCCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACt > 2:3505496/1‑149 (MQ=255) aCCCTCTCAATATCTACAATAATTCCATTTTTTTTTTTTTTTGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACt > 2:6441583/1‑149 (MQ=255) ccTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACtt > 1:3290642/1‑149 (MQ=255) cTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCTGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATGCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACttt < 2:1413076/149‑1 (MQ=255) cTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACttt > 2:8797759/1‑149 (MQ=255) ttCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACtttt < 2:4273272/149‑1 (MQ=255) ctcAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTgg > 2:10040465/1‑149 (MQ=255) cAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCCCCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGcc < 1:10003372/149‑1 (MQ=255) cAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGcc > 2:7750574/1‑149 (MQ=255) aaTATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCa > 2:9841983/1‑149 (MQ=255) aaTATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCa < 1:8228234/149‑1 (MQ=255) tatCTACACTAATTCCATTTTTAAGGCCCTCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATa < 2:1212388/149‑1 (MQ=255) tatCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATa > 2:9146246/1‑149 (MQ=255) tCTACAATAATTCCATTTTTAAGGCCGCCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACATGCACCTTTATTGTGTTTGTCCCGATATCTAGGCCTGTATAAAGTCCACTGTTGGCGATaaa > 2:2821273/1‑149 (MQ=255) tCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATaaa > 1:3885643/1‑149 (MQ=255) tCTACAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGGGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATaaa < 2:1875026/149‑1 (MQ=255) aCAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGc < 2:6981956/149‑1 (MQ=255) aCAATAATTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGc < 1:8850079/149‑1 (MQ=255) aataatTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACTAGCACCTTTATTGTGTTTGCCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGa < 2:7124425/149‑1 (MQ=255) taatTCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACACCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACt > 1:6869454/1‑149 (MQ=255) tCCATTTTTAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCCTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCtt > 2:3290486/1‑149 (MQ=255) ttttAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCt < 2:2997392/149‑1 (MQ=255) tttAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCTc < 1:4608856/149‑1 (MQ=255) ttAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTAATGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCTca < 1:6563260/149‑1 (MQ=255) tAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCTcac > 1:1793320/1‑149 (MQ=255) tAAGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCTcac > 1:2554765/1‑149 (MQ=255) aaGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCTcaca > 2:2533336/1‑149 (MQ=255) aaGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCTcaca < 2:4709224/149‑1 (MQ=255) aaGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGCCCATAAACGCGACTCCTTTCCCTcaca > 2:2252138/1‑149 (MQ=255) aGGCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCTcacac < 2:4038300/149‑1 (MQ=255) gCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCTCACACAt > 1:9651812/1‑149 (MQ=255) gCCATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCTCACACAt > 1:9894053/1‑149 (MQ=255) ccATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCTCACACATc < 1:7779394/149‑1 (MQ=255) cATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCTCACACATCa > 2:10433137/1‑149 (MQ=255) cATCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCTCACACATCa < 1:1437080/149‑1 (MQ=255) cATCGGATTTTACGTTTCCGACACCAATNATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCTCACACATCa > 1:5840616/1‑149 (MQ=255) aTCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCTCACACATCAc > 2:10189110/1‑149 (MQ=255) tCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCTCACACCTCACg > 2:9688383/1‑149 (MQ=255) tCGGATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCTCACACATCACg < 1:7671664/149‑1 (MQ=255) ggATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCTCACACATCACGAt < 2:6764678/149‑1 (MQ=255) gATTTTACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCTCACACATCACGAtt < 1:5253939/149‑1 (MQ=255) ttttACGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCTCACACATCACGATTCa > 2:9594186/1‑149 (MQ=255) | TTTCGAGGGAATTTGCTGGAATGCTCACGTTAATTCGATCAATCGTGATTCCGGCGCGTTCTTCAGCAGCATTTACAGCTTTTCGTAATGCTTGTGCTACCTTCTCAATATCTACAATAATTCCATTTTTAAGGCCATCGGATTTTGCGTTTCCGACACCAATTATATTCATTTCACCTGAGACGTATTCAGCAACAAGCACCTTTATTGTGTTTGTCCCGATATCTACGCCTGTATAAAGTCCACTTTTGGCCATAAAAGCGACTCCTTTCCCTCACACATCACGATTCAT > AM406671/2044605‑2044896 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |