| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 732,731 | +C | coding (210/975 nt) | malR → | putative maltose operon transcriptional repressor, LacI family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 732,730 | 1 | . | C | 99.2% | 3744.4 / 11.7 | 917 | coding (209/975 nt) | malR | putative maltose operon transcriptional repressor, LacI family |
| Reads supporting (aligned to +/- strand): ref base . (6/1); new base C (444/465); total (450/467) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.49e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 962 total aligned reads displayed.
CGAGTCATTAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGT‑CGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCAATTTTCCG > AM406671/732582‑732873 | cGAGTCATTAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGt < 2:4025653/149‑1 (MQ=255) gAGTCATTAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGT‑c > 1:4622143/1‑149 (MQ=255) aGTCATTAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGT‑cc < 1:9482308/149‑2 (MQ=255) gTCATTAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGT‑ccg > 1:7779216/1‑147 (MQ=255) gTCATTAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGT‑ccg > 2:7217083/1‑147 (MQ=255) tAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAATGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGAc > 1:5275315/1‑149 (MQ=255) tAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGAc > 1:5966106/1‑149 (MQ=255) aaaGATAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACa < 1:5442128/149‑1 (MQ=255) aaaGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTAGAGTTGTCTTTCCCCCGGTCCGCCGACa > 1:6632341/1‑149 (MQ=255) aCAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGc > 1:7433605/1‑149 (MQ=255) aGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCaa < 2:1919500/149‑1 (MQ=255) gTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAg < 2:230269/149‑1 (MQ=255) ttCAGAAATTTCGGATAACACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGt < 1:2131381/149‑1 (MQ=255) tCAGAAATTTCGGATAAATCGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAAAAAAAAACAAAACAAATACCATTGGAGGTGTCCTTCCCCCGGTCCGCCGACAAAGCAAGTc < 2:5593635/149‑1 (MQ=255) cAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCa > 1:3901724/1‑149 (MQ=255) cAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCa < 1:9246557/149‑1 (MQ=255) gAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAAc < 1:132937/149‑1 (MQ=255) aTTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACctt < 2:8386524/149‑1 (MQ=255) tCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTTGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACctttct < 1:884161/149‑1 (MQ=255) tCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACctttct < 2:3461927/149‑1 (MQ=255) tCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACctttct > 2:3242323/1‑149 (MQ=255) ggATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACctttcttt > 2:749511/1‑149 (MQ=255) ggATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACctttcttt < 1:7507275/149‑1 (MQ=255) aTAAAACGAAAGTAAAAGTTCGCAATGCCATGCATGAATTGGGTTATCGTCGTAATGCTGCGGCTCAGATTCTAGCCTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTAt < 2:2653974/149‑1 (MQ=255) aaCGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGaaa > 2:8707786/1‑149 (MQ=255) aCGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGaaaa < 1:1795520/149‑1 (MQ=255) aaaGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCt < 1:6260974/149‑1 (MQ=255) gTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCtcaa > 2:3619019/1‑149 (MQ=255) tCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCtcaatc > 1:2561469/1‑149 (MQ=255) gCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCtcaatcaa < 1:1013287/149‑1 (MQ=255) cAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTcaatcaat < 2:8861342/149‑1 (MQ=255) aaGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGa < 1:3268946/149‑1 (MQ=255) aGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGaa > 1:6938362/1‑149 (MQ=255) ccctgcatgAATTGGGTTATCGCCGTAATGCCGCGGCTCAGATTCTAGCTTCTGGAACAACAAATACCATTGGAGTTGTATTTCCCCCGGTCCGCCGACCAAGCAAGTCCACCTTTCTTCCTGCAACTTTCGACATCAATCACTCAAAc > 2:6264647/4‑149 (MQ=255) atgcatgAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTg > 2:1781326/1‑149 (MQ=255) atgcatgAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTg < 1:7955236/149‑1 (MQ=255) tgcatgAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGc > 2:8473218/1‑149 (MQ=255) gcatgAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCt > 2:3796594/1‑149 (MQ=255) catgAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTc > 2:2113672/1‑149 (MQ=255) catgAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTc > 2:5391999/1‑149 (MQ=255) gAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCggg > 1:4773672/1‑149 (MQ=255) aaTTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGa < 1:4917088/149‑1 (MQ=255) ttGGGCTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGAtt > 2:3873757/1‑149 (MQ=255) gggTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTat < 2:5046201/149‑1 (MQ=255) ggTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTatg > 1:3728909/1‑149 (MQ=255) ttATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTatgat < 1:8182327/149‑1 (MQ=255) aTCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGAtgt < 1:6132677/149‑1 (MQ=255) cgtAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGa > 1:7219221/1‑149 (MQ=255) cgtAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGa > 1:5139352/1‑149 (MQ=255) tAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGAtt < 1:42978/149‑1 (MQ=255) aaTGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTg < 1:1499442/149‑1 (MQ=255) tGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCt > 1:566088/1‑149 (MQ=255) gCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTa < 1:9094947/149‑1 (MQ=255) aGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATc > 2:9348880/1‑149 (MQ=255) gCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAACTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATcg > 2:1559212/1‑149 (MQ=255) cGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATcgc < 2:9131636/149‑1 (MQ=255) cTCAGATTCTAGCTTCTGGAAAAGCCAATACCATTGGAGTTGTCTTTCCGCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTGAAGCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGAc > 2:5269416/1‑149 (MQ=255) tCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACg < 2:1669620/149‑1 (MQ=255) aGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACggg < 1:4429634/149‑1 (MQ=255) ttCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACa > 2:9488178/1‑149 (MQ=255) tCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACAt > 1:4159702/1‑149 (MQ=255) cTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACAtt < 1:230106/149‑1 (MQ=255) cTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACAtt > 2:4726628/1‑149 (MQ=255) gCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtcgg < 2:8029212/149‑1 (MQ=255) gCTACTGGAAAAACAAATACCATTGGAGTTGTCTTGCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTGCTTTATGAAAATTTTGACCTCAATCAACGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtcgg < 2:1421041/149‑1 (MQ=255) cTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtcggt < 2:449297/149‑1 (MQ=255) tCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtcggtcg < 2:3026962/149‑1 (MQ=255) tCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtcggtcg > 2:7317977/1‑149 (MQ=255) cTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtcggtcgg < 2:8149263/149‑1 (MQ=255) ggAAACACAAATCCGATTGAAGTTGTCTTTACCCCGGTCCGCCGACAACGCAAGCCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACAATCGGTCGgag > 2:7687189/1‑149 (MQ=255) ggAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGgag > 1:8089742/1‑149 (MQ=255) gAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGgaga < 1:3003406/149‑1 (MQ=255) aaaaaCAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGaa > 2:5853387/1‑149 (MQ=255) aaaaaCAAATACCATTGGAGTTGTCTTCCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGaa < 1:8634245/149‑1 (MQ=255) aaaaCAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAAt > 2:2375695/1‑149 (MQ=255) aaaCAAATACCATTGGAGTTGTCTTTCCACCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAAtt < 2:6497215/149‑1 (MQ=255) aCAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTaa < 1:1688202/149‑1 (MQ=255) cAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTaaa > 1:6344643/1‑149 (MQ=255) aaTACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGCTTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAaaga > 1:278312/1‑149 (MQ=255) aTACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTGAACCTTTATTTATGAAAAGTTTGACCTCAGTCAATGAAACTGGTCGGGATTATGATGTGCCGGTTGCTATCGCGACGGGACATTCGGTCGGAGAATTAaagaa > 2:6941974/1‑149 (MQ=255) aTACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAaagaa > 1:1192078/1‑149 (MQ=255) cATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCaa > 1:3126192/1‑149 (MQ=255) cttGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGATCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAg < 1:978424/148‑1 (MQ=255) tGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGtt > 1:3617212/1‑149 (MQ=255) ggAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTg > 2:6693519/1‑149 (MQ=255) gTTGACTTCCCCCCGGTCCGCCTACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGGAACGGCTCGGGATTATGATGTGTCTATTACTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAAc < 2:4390541/149‑1 (MQ=255) ttGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACt < 2:1171116/149‑1 (MQ=255) ttGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACt > 1:8307766/1‑149 (MQ=255) ttGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACt > 1:3389709/1‑149 (MQ=255) tGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACtt < 2:7027651/149‑1 (MQ=255) tCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCa < 2:6093522/149‑1 (MQ=255) cTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCaa > 1:1942940/1‑149 (MQ=255) cTTTCACCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCaa > 2:7914984/1‑149 (MQ=255) ttCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCAAtt > 1:706764/1‑149 (MQ=255) ttCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCAAtt > 1:8448956/1‑149 (MQ=255) ttCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCAAtt > 1:412075/1‑149 (MQ=255) cccccGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCAAtttt < 1:572258/149‑1 (MQ=255) ccccGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGCCCTCAATCAATGAAACTGCTCTGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCAATTTTc < 2:2852754/149‑1 (MQ=255) cccGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCAATTTTcc > 1:6503826/1‑149 (MQ=255) ccGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCAATTTTCCg > 2:5741561/1‑149 (MQ=255) | CGAGTCATTAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGT‑CGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCAATTTTCCG > AM406671/732582‑732873 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |