| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 876,869 | C→G | H82D (CAT→GAT) | amtB → | ammonium transporter AmtB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 876,869 | 0 | C | G | 99.7% | 3631.3 / NA | 895 | H82D (CAT→GAT) | amtB | ammonium transporter AmtB |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (444/445); minor base A (0/3); total (445/450) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 895 total aligned reads displayed.
GTAAAAATGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTACATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTACTTTT > AM406671/876723‑877014 | gTAAAAATGTATTGATTACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGat < 2:6364502/149‑1 (MQ=255) aaaaaTGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGatat < 2:8579569/149‑1 (MQ=255) aaaaTGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATg < 2:546443/149‑1 (MQ=255) aaTGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGc < 1:362617/149‑1 (MQ=255) gTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCaa < 2:7030091/149‑1 (MQ=255) tATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCaca > 1:1882295/1‑147 (MQ=255) ttGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCaaaaa > 1:4639383/1‑149 (MQ=255) tGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAAt > 2:3385239/1‑149 (MQ=255) tGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAAt > 2:243636/1‑149 (MQ=255) aaTACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTc > 2:5879354/1‑149 (MQ=255) aaTACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATGGTAAATTTTGTCCATTTGTTTATGAATTGTGTAGATATGGCCAAAAGTTc > 2:7825532/1‑149 (MQ=255) aTACAATGATGCTGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAGATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGGGTAGATATGGCCAAAAATTCa < 2:347755/149‑1 (MQ=255) tACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCat < 1:1058048/149‑1 (MQ=255) tACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCat < 1:2848028/149‑1 (MQ=255) cAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCatta < 2:434151/149‑1 (MQ=255) cAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCatta < 2:666309/149‑1 (MQ=255) atgatgatgTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCattatt > 1:5709493/1‑149 (MQ=255) tgatgatgTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAATTTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCattatgt > 1:7022978/1‑147 (MQ=255) tgatgatgTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTAttt > 1:3456601/1‑149 (MQ=255) tgatgatgTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTAttt > 2:3991063/1‑149 (MQ=255) atgatgTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTTTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACTATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTTATTATTTcc > 2:2800467/1‑149 (MQ=255) gTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCa < 2:8115258/149‑1 (MQ=255) tCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCaa > 1:513340/1‑149 (MQ=255) aTTGGCTCCAATGGCTCTGGCTTACATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAAATAAAAAAAAAAATTCATTATTTCCTGCCAATc < 2:4813904/149‑1 (MQ=255) ttGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATca < 2:3769087/149‑1 (MQ=255) tGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATcac < 1:6639379/149‑1 (MQ=255) tCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTc < 2:73964/149‑1 (MQ=255) cAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCt > 1:1677120/1‑149 (MQ=255) aaTGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTGTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTg < 1:5890496/149‑1 (MQ=255) aTGGCTCTGGCTTCCATTTTATGTGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGa < 2:118341/149‑1 (MQ=255) aTGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGa > 2:5175261/1‑149 (MQ=255) aTGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGa < 1:9545427/149‑1 (MQ=255) aTGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGa > 2:4219070/1‑149 (MQ=255) tGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGAc > 2:1316780/1‑149 (MQ=255) tGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGAc > 1:4492303/1‑149 (MQ=255) ggCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACg > 2:1460786/1‑149 (MQ=255) ctctGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCAGATTCCTGACGGc > 2:1017103/1‑149 (MQ=255) tctGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGcc > 1:8039128/1‑149 (MQ=255) cTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCTGATAATTCATTATTTACTGCCAATCACATTCCTGACGGCCttttt > 2:2146048/1‑149 (MQ=255) cTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCttttt < 1:9330456/149‑1 (MQ=255) ttCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCtttttt < 1:309122/149‑1 (MQ=255) tCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTc < 2:5062347/149‑1 (MQ=255) cATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCa > 2:3145394/1‑122 (MQ=255) aTTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTgg > 2:4918272/1‑149 (MQ=255) aTTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTgg < 1:3962401/149‑1 (MQ=255) tttATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAGAAGTTCTATCTTTCCTGACAATAAAATTCCTGACGGCCTTTTTTCTGGtt > 2:8775207/1‑149 (MQ=255) tATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGtttt < 1:8298940/149‑1 (MQ=255) tATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGtttt > 2:6251100/1‑149 (MQ=255) gggTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAg < 2:6875937/149‑1 (MQ=255) ggTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAga < 2:7203121/149‑1 (MQ=255) ggTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAga < 1:5242943/149‑1 (MQ=255) ggTAATTATTGGCTTTTCATTTTCTATTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTGATTATTTCCTGACAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAga > 2:5294458/1‑149 (MQ=255) gTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAgat < 1:1493627/149‑1 (MQ=255) ttattGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGatgatg > 1:8836695/1‑149 (MQ=255) tattGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGt > 1:8196995/1‑149 (MQ=255) attGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGCAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGtt > 1:7934871/1‑149 (MQ=255) attGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACTGCCTTTTTTCTGGTTTTCAGATGATGtt > 2:6133201/1‑149 (MQ=255) ttGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGttt < 2:1860887/149‑1 (MQ=255) ggCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTc < 2:4087341/149‑1 (MQ=255) gCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCg < 2:3669886/149‑1 (MQ=255) tttCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGatt > 2:8277954/1‑149 (MQ=255) ttCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGatta < 1:1141921/149‑1 (MQ=255) ttCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGatta < 1:4291169/149‑1 (MQ=255) ttCATTTTCTTTTTCTGGAAATAATAGTTGGATTGCAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAGATTTATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGatta < 2:6074729/149‑1 (MQ=255) tCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGattat > 1:6755373/1‑149 (MQ=255) ttttctttttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTAc > 1:4969565/1‑149 (MQ=255) ttttctttttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTAc > 1:2082940/1‑149 (MQ=255) tttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCt < 1:4865658/149‑1 (MQ=255) ttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCtt < 2:5592138/149‑1 (MQ=255) ctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTg > 2:9150879/1‑149 (MQ=255) ctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTg > 1:845995/1‑149 (MQ=255) tGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGa > 1:727666/1‑149 (MQ=255) aaaTAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTa < 1:7493386/149‑1 (MQ=255) aaaTAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATCGCTAAAAGTCCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTa > 2:7986372/1‑149 (MQ=255) taataGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCTAGAAATTCTTTATTTCATGCCAAACACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAg > 2:2579685/1‑149 (MQ=255) aataGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAgg < 2:1665201/149‑1 (MQ=255) taGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCt < 2:2952336/149‑1 (MQ=255) gTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCg > 1:2696708/1‑149 (MQ=255) gTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCg < 2:2251098/149‑1 (MQ=255) ggattggaAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTa > 1:9163606/1‑149 (MQ=255) ggattggaAATTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTa > 1:40757/1‑149 (MQ=255) aTTTTGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGggagg < 2:9004125/149‑1 (MQ=255) tGACCATTTGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATga > 1:537221/1‑149 (MQ=255) aCCATTTGTTTATGAATGGTGTAGATCTGGCCGAACGCTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATgaga > 2:4470367/1‑149 (MQ=255) tttGTTTATGAATTGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCGCGGTAGTTGGGAGGATGAGATTTa < 1:6385767/149‑1 (MQ=255) tttGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTa < 1:3837052/149‑1 (MQ=255) tttGTTTATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTa < 2:9396747/149‑1 (MQ=255) ttGTTTATGAATGGTGTAGATCTGGCCAATAGTTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTAc > 2:8428596/1‑149 (MQ=255) ttATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCt < 2:7702375/149‑1 (MQ=255) ttATGAATGGCGTAGATATGGCCAAAAAGTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCt < 1:7806793/149‑1 (MQ=255) tATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTGGTTGGGAGGATGAGATTTACTCCTa < 1:3276993/149‑1 (MQ=255) tATGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTa > 1:8979284/1‑149 (MQ=255) aTGAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTGTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTAt < 1:8565319/149‑1 (MQ=255) gAATGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGTTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTAttt > 1:2603374/1‑148 (MQ=255) aTGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGCTGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTa < 1:6066165/149‑1 (MQ=255) aTGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTa < 1:1316780/149‑1 (MQ=255) tGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTAc < 1:7114816/149‑1 (MQ=255) tGGTGTAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTAc > 1:8736324/1‑149 (MQ=255) tgtAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTACttt < 1:7607723/149‑1 (MQ=255) tgtAGATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTACttt < 1:2303785/149‑1 (MQ=255) | GTAAAAATGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTACATATGGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTACTTTT > AM406671/876723‑877014 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |