| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 1,532,424 | G→C | P159R (CCC→CGC) | llmg_1560 ← | stress induced DNA binding protein (putative) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 1,532,424 | 0 | G | C | 99.8% | 3715.9 / NA | 906 | P159R (CCC→CGC) | llmg_1560 | stress induced DNA binding protein (putative) |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (460/444); minor base A (2/0); total (462/444) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 906 total aligned reads displayed.
AGCAAGCTCGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGGGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGTTTTCTATCAATGCTTC > AM406671/1532278‑1532569 | gCAAGCTCGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGaa > 1:7954275/1‑149 (MQ=255) aGCTCGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGaataa > 1:7143807/1‑149 (MQ=255) aGCTCGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGaataa < 2:3010441/149‑1 (MQ=255) gCTCGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGaataat > 2:1977852/1‑149 (MQ=255) gCTCGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGaataat < 1:4846399/149‑1 (MQ=255) gCTCGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGaataat > 1:2945907/1‑149 (MQ=255) cTCGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCTTGTTCTCCTCCAACATACCGaataatc > 2:4714254/1‑148 (MQ=255) cTCGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAataata < 2:2403568/149‑1 (MQ=255) tCGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAg < 2:7543710/149‑1 (MQ=255) tCGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAg > 1:8949880/1‑149 (MQ=255) cGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGa > 2:1599992/1‑149 (MQ=255) cTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACaa > 2:8645746/1‑149 (MQ=255) cTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACaa > 1:1882714/1‑149 (MQ=255) cTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATtat > 1:4455718/1‑149 (MQ=255) cAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAg < 1:507067/149‑1 (MQ=255) tCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGt < 2:8338455/149‑1 (MQ=255) tCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCACATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGt > 1:5283513/1‑149 (MQ=255) aGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTaa < 2:672346/149‑1 (MQ=255) aaaaaaGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAg < 1:1714777/149‑1 (MQ=255) aaaGTGGGACTAGATGGATACAATGGTGGTCACTTAAATGCTCGTCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTAATCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCtt < 2:6298796/149‑1 (MQ=255) gTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCg > 2:4552494/1‑149 (MQ=255) tGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGa < 1:7693987/149‑1 (MQ=255) gggACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGaa < 2:1504229/149‑1 (MQ=255) gACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAAtt < 1:4095102/149‑1 (MQ=255) gACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAAtt > 2:7947257/1‑149 (MQ=255) aCTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTg > 1:8001809/1‑149 (MQ=255) aCTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTg > 2:884002/1‑149 (MQ=255) cTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGc < 2:5199282/149‑1 (MQ=255) gCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAg < 2:2238630/149‑1 (MQ=255) cTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGt < 2:9243071/149‑1 (MQ=255) ggATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTc < 1:9122523/149‑1 (MQ=255) ggATACAATCGTGGTCACTTAAATGCTCACCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTc < 2:2159561/149‑1 (MQ=255) gATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCt < 1:8731747/149‑1 (MQ=255) tACAATGGTGGTTACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTaa > 2:2767611/1‑149 (MQ=255) aCAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAg < 1:226913/149‑1 (MQ=255) aCAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAg < 1:4535022/149‑1 (MQ=255) aaTGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAgat > 2:612695/1‑147 (MQ=255) tggtggTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTaa > 2:4848092/1‑149 (MQ=255) ggtggtCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTaaa < 2:3988849/149‑1 (MQ=255) gtggtCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCTTAGTTCTTCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAAt > 2:7726468/1‑149 (MQ=255) tggtCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAAtt < 1:8201081/149‑1 (MQ=255) tggtCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAAtt < 1:9618215/149‑1 (MQ=255) tCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAAttttt < 1:8408285/149‑1 (MQ=255) cACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTttc > 2:1856059/1‑149 (MQ=255) aCTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTttct < 1:9441900/149‑1 (MQ=255) aCTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTttct < 2:5462672/149‑1 (MQ=255) cTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGAAAGTTCTAAGCTAAATTTttctt > 2:1316849/1‑149 (MQ=255) aaTGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCtt < 2:8989204/149‑1 (MQ=255) aaTGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCtt > 1:3139362/1‑149 (MQ=255) aTGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCttt > 2:8146508/1‑149 (MQ=255) tGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCtttt < 2:3232148/149‑1 (MQ=255) gCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGCCAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTg < 1:5647192/149‑1 (MQ=255) tcatcaAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTgcg < 1:6621308/149‑1 (MQ=255) tcatcaAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTgcg > 2:4931622/1‑149 (MQ=255) catcaAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTgcgc < 2:8483665/149‑1 (MQ=255) atcaAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCt > 1:9261434/1‑149 (MQ=255) aaaTCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGtt < 2:6524065/149‑1 (MQ=255) aaTCTTTAATCTTCATCTTCCTCCTCAATAAATCCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTTCGCTAGttt > 2:9497449/1‑149 (MQ=255) aTCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTa > 1:1221359/1‑149 (MQ=255) cTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAAt < 1:1450265/149‑1 (MQ=255) tttAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATc > 1:3574700/1‑149 (MQ=255) tAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGc < 2:4377304/149‑1 (MQ=255) tAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGc < 2:3472306/149‑1 (MQ=255) aaTCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCt < 2:1121265/149‑1 (MQ=255) cttcatcttcCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGt > 2:7195176/1‑149 (MQ=255) tcatcttcCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTcc > 2:636589/1‑149 (MQ=255) atcttcCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGa > 1:3468707/1‑149 (MQ=255) ttcCTCCTCAATAAATTCGCCTATCGTTTTTCCATTTTCTCTTGCAAAATAGCGACTAATAGGCAAATTATAGCCGTAAAGCGTGCGGATTGCGAGTTCTAAGCTAAATTTTTCTTCCTTTTCCGCTCGTTTAATCGCTCGTCAGattc > 2:5726322/1‑147 (MQ=255) ttcCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGataa < 1:3269765/149‑1 (MQ=255) tcctccTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGataaa > 1:4001106/1‑149 (MQ=255) cctcctCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGataaat > 2:9149389/1‑149 (MQ=255) ctcAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATaaataaat > 1:7372795/1‑149 (MQ=255) tcAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAAtt > 1:8577972/1‑149 (MQ=255) tAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTgg > 1:5445761/1‑149 (MQ=255) aTTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTc > 1:1011197/1‑149 (MQ=255) ttCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCt < 1:7503424/149‑1 (MQ=255) tCGCCTATCGTTTTTTTTTTTTTTTCTGCAAAATAGAGGATAATAGACAAATTATAGCTGTCAAGTTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTTCTTTTGTTCTTGTTTATTTGCTCATATGATAAATAAATTTTGGTTTTg > 2:5913020/1‑149 (MQ=255) cGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGa > 2:2870329/1‑149 (MQ=255) gCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGaa < 1:4260415/149‑1 (MQ=255) cTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGaaaa > 1:3802100/1‑149 (MQ=255) tATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAAt < 1:2748847/149‑1 (MQ=255) aTCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTCAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATc < 2:5810777/149‑1 (MQ=255) ttttCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGa < 2:261277/149‑1 (MQ=255) tttCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGAt < 1:6823162/149‑1 (MQ=255) tttCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGAt < 2:7046240/149‑1 (MQ=255) ttCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATa < 1:6396959/149‑1 (MQ=255) ttCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATa > 2:7293865/1‑149 (MQ=255) ttCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATa > 2:3778871/1‑149 (MQ=255) tCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATaa < 1:4630134/149‑1 (MQ=255) cAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAg < 1:6542798/149‑1 (MQ=255) agtgcgccTGCAAAATAGCGAATAATAGACAAATTACAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGtt < 1:600694/143‑1 (MQ=255) aGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGtt > 1:2073344/1‑149 (MQ=255) ctcCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGTTTTCt > 1:1118641/1‑149 (MQ=255) ctcCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGTTTTCt > 2:118959/1‑149 (MQ=255) ccTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTCCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGTTTTCTAt > 1:2388907/1‑149 (MQ=255) cTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGTTTTCTATc < 2:694005/149‑1 (MQ=255) tGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGTTTTCTATCa > 2:4178272/1‑149 (MQ=255) aaaaTAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGTTTTCTATCAATg < 1:6258658/149‑1 (MQ=255) aaTAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGTTTTCTATCAATGCt < 2:3574926/149‑1 (MQ=255) aTAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGTTTTCTATCAATGCtt < 2:1744546/149‑1 (MQ=255) | AGCAAGCTCGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGGGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGTTTTCTATCAATGCTTC > AM406671/1532278‑1532569 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |