| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 1,610,761 | T→C | I430V (ATT→GTT) | llmg_1634 ← | putative membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 1,610,761 | 0 | T | C | 99.9% | 3753.4 / NA | 904 | I430V (ATT→GTT) | llmg_1634 | putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (427/476); minor base A (1/0); total (428/476) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 920 total aligned reads displayed.
TCCCAAAAGCGTAGCAAAGAAAATGATAAAAACCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAATATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAATTTCACTCTGAGATAGAAATTCAACTTCATGGGT > AM406671/1610615‑1610906 | cccAAAAGCGTAGCAAAGAAAATGATAAAAACCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACAtt < 2:1515035/149‑1 (MQ=255) cccAAAAGCGTAGCAAAGAAAATGATAAAAACCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACAtt > 2:3416668/1‑149 (MQ=255) cAAAAGCGTAGCAAAGAAAATGATAAAAACCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTcc < 2:734037/149‑1 (MQ=255) aaaaGCGTAGCAAAGAAAATGATAAAAACCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTccc < 1:1509413/149‑1 (MQ=255) aaGCGTAGCAAAGAAAATGATAAAAACCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGAGAAATCAGATATACCCCAATAACATACCCaa > 2:9107306/1‑149 (MQ=255) aGCGTAGCAAAGAAAATGATAAAAACCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAAt < 2:7848613/149‑1 (MQ=255) gCGTAGCAAAGAAAATGATAAAAACCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAAtt < 2:5653023/149‑1 (MQ=255) gTAGCAAAGAAAATGATAAAAACCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTaa < 1:9443357/149‑1 (MQ=255) aGCAAAGAAAATGATAAAAACCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACa > 1:2514416/1‑149 (MQ=255) aGCAAAGAAAATGATAAAAACCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACa < 2:7037170/149‑1 (MQ=255) gCAAAGAAAATGATAAAAACCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAg > 1:8971831/1‑149 (MQ=255) gCAAAGAAAATGATAAAAACCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAg > 1:7683954/1‑149 (MQ=255) aaGAAAATGATAAAAACCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGccc > 2:1897748/1‑149 (MQ=255) aaGAAAATGATAAAAACCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGccc > 2:4844766/1‑149 (MQ=255) aGAAAATGATAAAAACCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCa > 2:3205010/1‑149 (MQ=255) aGAAAATGATAAAAACCCGAAACCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCa < 2:3829435/149‑1 (MQ=255) aaaaTGATAAAAACCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACACAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCaaa > 2:1709352/1‑149 (MQ=255) aaTGATAAAAACCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAaga > 1:3557022/1‑149 (MQ=255) aTGATAAAAACCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAagag < 1:3259589/149‑1 (MQ=255) aTAAAAACCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCaa < 1:7525664/149‑1 (MQ=255) tAAAAACCCGAAATCCACCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGACCAATTTAAATTTAAGAGATGCCAAACAAAAAAAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAg < 2:5489795/149‑1 (MQ=255) aaaaaCCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAgg < 1:2621900/149‑1 (MQ=255) aaaaaCCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATCTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAgg > 1:5008197/1‑149 (MQ=255) aCCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAAc < 1:2945075/149‑1 (MQ=255) cccGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACa > 1:2009044/1‑149 (MQ=255) ccGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAg > 1:8298600/1‑149 (MQ=255) aaTCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGAc > 1:875665/1‑149 (MQ=255) aaTCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGAc > 1:6368402/1‑149 (MQ=255) ccccAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTc < 1:3824651/149‑1 (MQ=255) cccAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCa < 1:7862249/149‑1 (MQ=255) ccAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAg < 1:6167436/149‑1 (MQ=255) cAGGACCTCTTGGAAAAAGTTGAGTAAACGCAGTCCAATTTAAATTTAAGAGATGACAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAATGCGCAAGGGAACAGGGACTTTCGGt < 2:829868/149‑1 (MQ=255) aaCCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTaaa < 1:865393/149‑1 (MQ=255) aaCCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTaaa < 2:8595974/149‑1 (MQ=255) ccTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAAt > 1:6857062/1‑149 (MQ=255) ccTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAAt < 2:6901067/149‑1 (MQ=255) ctctTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATa > 2:6147384/1‑149 (MQ=255) tctTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATAc > 1:4445300/1‑149 (MQ=255) gTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAAt > 2:6382469/1‑149 (MQ=255) aaaaaGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCa < 1:1204129/149‑1 (MQ=255) aaaaaGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCa < 2:7689609/149‑1 (MQ=255) aaGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTa > 1:1344631/1‑149 (MQ=255) tGAGTCAACGCAGTCCAATTTAAATCTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACACCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGCCCTTCAGTAAAATACCAATCACTAaaga > 2:5226784/1‑149 (MQ=255) tCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAaagataag > 2:5004148/1‑149 (MQ=255) aaCGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAaagataagat < 2:4249103/149‑1 (MQ=255) aCGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGAtt > 2:8095687/1‑149 (MQ=255) cGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTa < 1:4677789/149‑1 (MQ=255) cGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTa < 2:1373301/149‑1 (MQ=255) aGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAAt > 2:4132734/1‑149 (MQ=255) gTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATc < 2:2501911/149‑1 (MQ=255) ccAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCaa < 2:9467461/149‑1 (MQ=255) cAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAg > 2:4411307/1‑149 (MQ=255) cAATTTAAATTTAAGAGATGCCAAACACTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAAGAGCCCAAAGAGCAAGGGAACAGGGACGTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAg < 2:223000/149‑1 (MQ=255) aatttaaatttaAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGa < 1:9526969/149‑1 (MQ=255) tttaaatttaaGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAAc < 1:716532/149‑1 (MQ=255) tttaaatttaaGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAAc > 2:8387769/1‑149 (MQ=255) tttaaGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTg < 2:6585810/149‑1 (MQ=255) ttaaGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGa < 1:9148725/149‑1 (MQ=255) taaGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGaa < 1:3416668/149‑1 (MQ=255) aaGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAAGCACTAAAGATAAGATTAAATCAAGAACTAGTTGAAt < 1:7330867/149‑1 (MQ=255) tagaTGCCAATCTCTGACAAAATAATTGAGTGAAATCAGAGATACCCCAATAACATTCCCAATTAACAGCCCAAAGGGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATaa < 2:467290/148‑1 (MQ=255) gagaTGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATaa < 1:2108394/149‑1 (MQ=255) tGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATaaaaaa < 1:7000554/149‑1 (MQ=255) gCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAg < 1:2782970/149‑1 (MQ=255) gCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAg > 2:2839399/1‑149 (MQ=255) ccAATCTCTGACAAAATAATGAAGTGAAAGCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAgg < 2:2331269/149‑1 (MQ=255) aaTCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCa < 1:81780/149‑1 (MQ=255) aaTCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGCTGAATAAAAAAGGCa > 2:5121014/1‑149 (MQ=255) aTCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCaa < 1:4839490/149‑1 (MQ=255) ctctAACAAAATAATGAAGTTAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATAACAAACACTAAAGCTAAGATTAAATCAACAACTAGTTGAAAAAAAAAGGCaaaa < 2:6740176/149‑1 (MQ=255) ctGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATg < 1:845211/149‑1 (MQ=255) ctGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATg < 2:3761327/149‑1 (MQ=255) ctGACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATg > 1:167240/1‑149 (MQ=255) gACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGaa > 1:6013382/1‑149 (MQ=255) gACAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGaa > 1:9287009/1‑149 (MQ=255) cAAAATAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAAt > 2:3626520/1‑149 (MQ=255) aaaaTAATGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAAtt < 1:4191734/149‑1 (MQ=255) aataatGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAATTTc < 2:1161307/149‑1 (MQ=255) ataatGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAATTTCa < 1:4284141/149‑1 (MQ=255) taatGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAATTTCAc > 1:1000894/1‑149 (MQ=255) taatGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAATTTCAc < 1:5125922/149‑1 (MQ=255) taatGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGACCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAATTTCAc < 2:6025117/149‑1 (MQ=255) aatGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAAAAAAAAAGGAAAAATGAAATTTCAct < 2:9239023/149‑1 (MQ=255) aatGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAAATAGAAAAAAAAAAAAGGCAAAATGAAATTTCAct < 2:2706968/149‑1 (MQ=255) atGAAGTGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAAttt < 1:3990349/144‑1 (MQ=255) tGAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAATTTCACTCTGAGAt > 1:8034943/1‑149 (MQ=255) gAAATCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAATTTCACTCTGAGATa < 2:8767702/149‑1 (MQ=255) gAAAGCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAATTTCACTCTGAGATa < 2:890370/149‑1 (MQ=255) aaaTCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAATTTCACTCTGAGATAg > 1:3116889/1‑149 (MQ=255) aaTCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAATTTCACTCTGAGATAGa < 2:2978965/149‑1 (MQ=255) tCAGATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAATTTCACTCTGAGATAGaaa > 2:4051165/1‑149 (MQ=255) gATATACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCCCTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAATATCACTCTGAGATAGAAATTc > 1:5464507/1‑149 (MQ=255) atatACCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAATTTCACTCTGAGATAGAAATTCa > 2:6292998/1‑149 (MQ=255) tataCCCCAATAACATTACCAAGTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACAAAAAAAAAAAAAAAGGCAAAATGAAATTTCACTCTGAGATAGAAATTCaa < 2:5889973/149‑1 (MQ=255) ataCCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAATTTCACTCTGAGATAGAAATTCAAc > 1:5802273/1‑149 (MQ=255) ataCCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAATTTCACTCTGAGATAGAAATTCAAc > 1:6575957/1‑149 (MQ=255) taCCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAATTTCACTCTGAGATAGAAATTCAACt > 2:7579872/1‑149 (MQ=255) aCCCCAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAATTTCACTCTGAGATAGAAATTCAACtt < 1:2305023/149‑1 (MQ=255) ccccAATAACATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAATTTCACTCTGAGATAGAAATTCAACTTc < 2:5805402/149‑1 (MQ=255) ataacaTTCCCAATTAACAGCCCAAAGANCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAATTTCACTCTGAGATAGAAATTCAACTTCATggg > 1:5304575/1‑149 (MQ=255) | TCCCAAAAGCGTAGCAAAGAAAATGATAAAAACCCGAAATCCCCCAGAACCTCTTGTAAAAAGTTGAGTCAACGCAGTCCAATTTAAATTTAAGAGATGCCAATCTCTGACAAAATAATGAAGTGAAATCAGATATACCCCAATAATATTCCCAATTAACAGCCCAAAGAGCAAGGTAACAGGGACTTTCAGTAAAATACCAATCACTAAAGATAAGATTAAATCAAGAACTAGTTGAATAAAAAAGGCAAAATGAAATTTCACTCTGAGATAGAAATTCAACTTCATGGGT > AM406671/1610615‑1610906 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |