| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 1,731,090 | T→C | G335G (GGA→GGG) | llmg_1749 ← | putative membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 1,731,090 | 0 | T | C | 99.9% | 4049.7 / NA | 968 | G335G (GGA→GGG) | llmg_1749 | putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (438/527); total (440/528) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 987 total aligned reads displayed.
ATCAGTAAAATTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAATCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAATTGAAATTC > AM406671/1730945‑1731235 | aTCAGTAAAATTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCa < 2:5323251/149‑1 (MQ=255) cAGTAAAATTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAg < 1:8805544/149‑1 (MQ=255) aGTAAAATTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGa < 2:7371224/149‑1 (MQ=255) gTAAAATTAATAGGATCAAGAGTGCATTCATAAAGCACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATGGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGac < 2:8726170/149‑2 (MQ=255) gTAAAATTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGAt < 1:6730747/149‑1 (MQ=255) tAAAATTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGAtt < 2:5910144/149‑1 (MQ=255) aaaTTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTaa > 1:2091590/1‑149 (MQ=255) aaTTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAg < 1:4049189/149‑1 (MQ=255) aTTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGa > 1:2776412/1‑149 (MQ=255) ttAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGAc < 2:4575823/149‑1 (MQ=255) tAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAAc < 1:7661356/149‑1 (MQ=255) tAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAAc > 2:8446593/1‑149 (MQ=255) tAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAAc < 1:9169106/149‑1 (MQ=255) ggATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCg < 1:3513890/149‑1 (MQ=255) ggATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCg < 2:1767392/149‑1 (MQ=255) gATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGt > 2:8972446/1‑149 (MQ=255) aaGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCa > 2:1938470/1‑149 (MQ=255) gagTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAat < 2:3593867/149‑1 (MQ=255) gagTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAat < 2:7933241/149‑1 (MQ=255) agTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGAcc < 2:443951/136‑1 (MQ=255) agTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAata < 1:8714443/149‑1 (MQ=255) agTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAata < 2:6694266/149‑1 (MQ=255) gTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAatat < 1:3828240/149‑1 (MQ=255) gTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAatat < 1:2900284/149‑1 (MQ=255) gTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAatat > 1:2299061/1‑149 (MQ=255) tGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAAtata > 1:8369934/1‑149 (MQ=255) gCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATaa > 2:6141527/1‑149 (MQ=255) aTTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATTATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGa < 2:4929483/149‑1 (MQ=255) ttCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGAt > 2:5124543/1‑123 (MQ=255) ttCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGAc > 1:422460/1‑149 (MQ=255) tCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGAcc > 2:7073865/1‑149 (MQ=255) cATAAAGACCTCTCCTTTCCTGGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTAGCACAGCTAACACGATTCCAATCGCCGAAATAATCGTTTGTAATCACCCAAGATTAAGACCAACCGTTGCAATATAAGACCa < 2:1234715/149‑1 (MQ=255) aaaGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGa < 1:3693504/149‑1 (MQ=255) aaGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATGCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGaa < 1:4934557/149‑1 (MQ=255) aCTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTc > 2:7467523/1‑149 (MQ=255) ctctCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTcc < 2:1623441/149‑1 (MQ=255) ctcCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCAt < 2:3719966/149‑1 (MQ=255) ctcCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCAt < 1:5461168/149‑1 (MQ=255) tcctttccttGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCAtt > 2:864093/1‑149 (MQ=255) tcctttccttGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCAtt < 2:6362185/149‑1 (MQ=255) ctttccttGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTtc > 1:1688638/1‑149 (MQ=255) tttccttGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTtct < 2:5776580/149‑1 (MQ=255) ttccttGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTtctc > 2:8245062/1‑149 (MQ=255) tccttGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCa > 2:6891618/1‑149 (MQ=255) ttGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGAAATATAAGACCAAAAATTTCAATTTCTCaata > 2:2170143/1‑149 (MQ=255) gatgatTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCaataat < 1:5154478/149‑1 (MQ=255) gatgatTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCaataat > 2:8888565/1‑149 (MQ=255) atgatTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAataata < 1:7159534/149‑1 (MQ=255) atgatTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAataata > 2:3122744/1‑149 (MQ=255) tttCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAg > 2:9411065/1‑149 (MQ=255) tttCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAg < 1:4448651/149‑1 (MQ=255) cTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGt < 2:5463453/149‑1 (MQ=255) tAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTc < 1:2977124/149‑1 (MQ=255) aaaGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCgg < 1:6009312/149‑1 (MQ=255) aaGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGc > 2:4206139/1‑149 (MQ=255) aaGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCAGAAATAATCGTTTGTAATAACCCAAGATTAAGACGAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAACGCGACATCgcc > 2:2311968/1‑147 (MQ=255) aGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATc < 1:6223498/145‑1 (MQ=255) aaaCTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGt < 1:3168251/149‑1 (MQ=255) aaCTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGtt > 1:6676080/1‑149 (MQ=255) ttGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTGCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTcc > 1:6925912/1‑149 (MQ=255) aaCAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGa < 2:153338/149‑1 (MQ=255) cAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGaaa < 1:1028339/149‑1 (MQ=255) cAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGaaa < 1:2565677/149‑1 (MQ=255) cGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATc > 2:2897276/1‑149 (MQ=255) cGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATc < 1:1418776/149‑1 (MQ=255) ggTAATTGGCACAGCTAACACGCTTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCTTCATCGGCAAAGTTTCCGCCATGAAAATCa < 2:1376114/149‑1 (MQ=255) ggTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCa < 2:3380312/149‑1 (MQ=255) tAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATg < 2:7621587/149‑1 (MQ=255) aTTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGaa > 1:7759412/1‑149 (MQ=255) ttGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAAc > 1:2416751/1‑149 (MQ=255) ggCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACaa < 1:8609516/149‑1 (MQ=255) aGCTAACACGATTCCGATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACAt > 2:2705709/1‑149 (MQ=255) aaCACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGt > 1:1800186/1‑149 (MQ=255) cacGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCa > 2:5581133/1‑149 (MQ=255) cacGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCa < 2:4026621/149‑1 (MQ=255) cGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCaaa > 1:9346445/1‑149 (MQ=255) cGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCaaa > 1:3909722/1‑149 (MQ=255) ttCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGtt > 1:9566795/1‑149 (MQ=255) tCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTc < 1:7429585/149‑1 (MQ=255) cAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCa < 2:3250972/149‑1 (MQ=255) aaTGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCaa < 1:8913765/149‑1 (MQ=255) aTGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTCCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAAt < 1:5859873/149‑1 (MQ=255) tGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATg > 2:7206933/1‑149 (MQ=255) tGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATg > 1:7958290/1‑149 (MQ=255) gCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGGCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAg < 1:5635207/149‑1 (MQ=255) ccGAAATAATCGTTTTTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGc < 1:4356054/149‑1 (MQ=255) cGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGct > 1:46562/1‑149 (MQ=255) aataatCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCtt < 1:9034176/149‑1 (MQ=255) aataatCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCtt > 2:2542537/1‑149 (MQ=255) ataatCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTg < 1:33817/149‑1 (MQ=255) taatCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGc < 1:8198648/149‑1 (MQ=255) tCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCa > 1:1917663/1‑149 (MQ=255) cGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTNGTCAAAGTTCCAATGAGCTCTTGCCCaa < 1:5348294/149‑1 (MQ=255) gTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAAt < 2:6539316/149‑1 (MQ=255) ttGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAATTg > 2:1094452/1‑149 (MQ=255) taataaCCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAATTGaaa < 2:473865/149‑1 (MQ=255) taataaCCCAAGACTAAGATCAACCGTTGCAATATAAGACCAAGAATTTCCCTTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAATTGaaa < 1:4708267/149‑1 (MQ=255) aataacCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAATTGAAAt > 2:9210173/1‑149 (MQ=255) ataacCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAATTGAAAtt < 1:1193858/149‑1 (MQ=255) ataacCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAATTGAAAtt > 1:6410387/1‑149 (MQ=255) | ATCAGTAAAATTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAATCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAATTGAAATTC > AM406671/1730945‑1731235 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |