| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 2,122,554 | G→A | S58L (TCG→TTG) | cfa ← | cyclopropane‑fatty‑acyl‑phospholipid synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 2,122,554 | 0 | G | A | 99.9% | 4592.9 / NA | 1179 | S58L (TCG→TTG) | cfa | cyclopropane‑fatty‑acyl‑phospholipid synthase |
| Reads supporting (aligned to +/- strand): ref base G (0/1); major base A (593/584); minor base C (1/0); total (594/585) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 1179 total aligned reads displayed.
GATTTCCCAAAAGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCGAGGCTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTGCTTT > AM406671/2122408‑2122699 | ttCCCAAAAGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAggtt > 1:7205104/1‑147 (MQ=255) tCCCAAAATTTTGAGCATTACCTCACCTCCGCCAGATTGGTCAGTAAACAAACCGTCCGCGTTACGGTAACATGATGCTACAAGCGTTTGGATACTCCCTTCAATCTCAATTTCTTCATCCATATAAGCCTCAGCTAAGACCAAGGTTg < 2:5928582/149‑1 (MQ=255) cccAAAAGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTgg < 1:4735110/149‑1 (MQ=255) ccAAAAGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGc < 2:2054526/149‑1 (MQ=255) ccAAAAGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTATCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGc > 2:5416297/1‑149 (MQ=255) aaGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATtg > 2:3857896/1‑149 (MQ=255) aaGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATtg > 1:7968962/1‑149 (MQ=255) aaGTATGAGCATTAATTTACCAAAGCCAGATTTGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATtg > 2:2364200/1‑149 (MQ=255) aGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATtga < 2:9273115/149‑1 (MQ=255) aGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATtga > 1:6780331/1‑149 (MQ=255) ttGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATtgatga < 2:8952977/149‑1 (MQ=255) cATTAATGTACCAAAGCCGTATGGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTGCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATaagt < 2:7818171/149‑3 (MQ=255) aTTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATc < 2:906874/149‑1 (MQ=255) tAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGc > 1:1952938/1‑149 (MQ=255) tAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGc > 1:7007451/1‑149 (MQ=255) tAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGc > 2:2686162/1‑149 (MQ=255) tttACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTaa > 1:8198710/1‑149 (MQ=255) tttACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTaa < 1:2749981/149‑1 (MQ=255) tttACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTaa > 1:2462346/1‑149 (MQ=255) tACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAAt < 2:858870/149‑1 (MQ=255) aCCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATg > 2:6908142/1‑149 (MQ=255) aaaGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATgaga > 2:8417125/1‑149 (MQ=255) aGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAAt > 2:2243287/1‑149 (MQ=255) aGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAAttttt < 2:1758721/149‑1 (MQ=255) gATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAAtttttt < 2:1882950/149‑1 (MQ=255) aTTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTa > 2:7640308/1‑149 (MQ=255) aTTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTa > 2:1437338/1‑149 (MQ=255) ttGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTAt < 1:1008278/149‑1 (MQ=255) tGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTAtt > 1:1402681/1‑149 (MQ=255) gTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGa > 2:4514646/1‑149 (MQ=255) tCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGaa < 1:2041692/149‑1 (MQ=255) tCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATACAACAAGCTCTTGGATACTCCCTTCAAGCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGaa > 2:6415400/1‑149 (MQ=255) cAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGaaa > 1:3992750/1‑149 (MQ=255) gTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGt > 2:1328477/1‑149 (MQ=255) gTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGt > 1:9426506/1‑149 (MQ=255) aaaaaaCTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGAt > 1:5760144/1‑149 (MQ=255) aaaaaCTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGAtg < 2:7009323/149‑1 (MQ=255) aaaaCTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGAtgt < 1:9015031/149‑1 (MQ=255) aaaCTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGAtgtg < 1:6676341/149‑1 (MQ=255) aaaCTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGAtgtg > 1:438684/1‑149 (MQ=255) aCTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGa > 2:7975376/1‑148 (MQ=255) tCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTg < 2:7276853/149‑1 (MQ=255) gCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGt > 2:5171271/1‑149 (MQ=255) gCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGt > 2:9432640/1‑149 (MQ=255) cTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGtt < 1:9326377/149‑1 (MQ=255) tttACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGttt > 2:8337068/1‑149 (MQ=255) tACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTtct > 1:4600698/1‑149 (MQ=255) cGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGTATTGATGTTAAATCGCTAAATGAGAAGTTTTTATTGAAAGTGATGTGAAGCTGAGTTTCTcc > 2:6060280/1‑149 (MQ=255) ggTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCt > 1:6352707/1‑149 (MQ=255) ggTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACATGAGTTTCTCCt > 1:7351257/1‑149 (MQ=255) ggTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAACCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCt > 1:5009747/1‑149 (MQ=255) gTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCtt > 1:5985496/1‑149 (MQ=255) gTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCtt > 2:4883899/1‑149 (MQ=255) aaGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCa < 1:6491561/149‑1 (MQ=255) tGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCAt > 2:6333734/1‑149 (MQ=255) gATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATa < 1:2271747/149‑1 (MQ=255) tGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTTATGTGAACCTGAGTTTCTCCTTAAccctcct > 2:530453/1‑144 (MQ=255) aacaaGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACtttt < 1:8039738/149‑1 (MQ=255) aacaaGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACtttt < 2:8779224/149‑1 (MQ=255) aacaaGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACtttt > 2:4080431/1‑149 (MQ=255) acaaGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTTTTTTATTTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTc > 2:4334028/1‑149 (MQ=255) acaaGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTc > 1:2917832/1‑149 (MQ=255) caaGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCt < 2:6687375/149‑1 (MQ=255) aaGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTg > 2:1615588/1‑149 (MQ=255) gCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGtt < 2:5751804/149‑1 (MQ=255) ctctTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGttt > 2:309200/1‑149 (MQ=255) tctTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGtttt < 1:8669929/149‑1 (MQ=255) ctTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGttttt < 1:3803701/149‑1 (MQ=255) ggATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCa > 2:5006067/1‑149 (MQ=255) aTACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATc > 1:7540682/1‑149 (MQ=255) tACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATcc < 1:1163460/149‑1 (MQ=255) aCTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATccc > 1:3417379/1‑149 (MQ=255) cTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGTTTGGCATTGATGATAAATCTCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCa > 1:8558821/1‑149 (MQ=255) tCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCaa < 1:55222/149‑1 (MQ=255) ccTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATa > 1:6198005/1‑149 (MQ=255) ccTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATa < 1:3239762/149‑1 (MQ=255) cAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTGCCCATACTTTTCTGTTTTTCTATCACAATAAGTc > 2:8111487/1‑149 (MQ=255) ctcAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTg > 2:7398621/1‑149 (MQ=255) tcAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGc > 2:3272361/1‑149 (MQ=255) tcAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGc > 1:3106160/1‑149 (MQ=255) tcAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGc > 1:7813869/1‑149 (MQ=255) aaTTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCaa > 2:3554317/1‑149 (MQ=255) aTTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAAt < 2:563514/149‑1 (MQ=255) ttcttcATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATgg < 1:9190202/149‑1 (MQ=255) ttcattcaTATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGa > 1:2605490/1‑149 (MQ=255) ttcattcaTATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGa > 2:7509453/1‑149 (MQ=255) tcattcatATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGat > 2:2491282/1‑149 (MQ=255) cattcatATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGata > 2:7167244/1‑149 (MQ=255) cattcatATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGATTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGata > 1:5154724/1‑149 (MQ=255) ttcatATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATc > 2:6191973/1‑149 (MQ=255) ttcatATAAGCCTCAGCTAATACCAAGGNTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATc > 1:5334658/1‑149 (MQ=255) tataAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGaaa > 2:4693005/1‑149 (MQ=255) ataAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAg < 1:1557249/149‑1 (MQ=255) taAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGc < 1:3671182/149‑1 (MQ=255) tCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGc > 1:4293876/1‑149 (MQ=255) aGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTGACCATAGTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCaa < 2:112916/149‑1 (MQ=255) cTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGt > 1:1755793/1‑149 (MQ=255) aaTACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTGc > 2:2958712/1‑149 (MQ=255) aaTACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTGc > 1:8854134/1‑149 (MQ=255) tACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTGCtt < 1:8330669/149‑1 (MQ=255) | GATTTCCCAAAAGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCGAGGCTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTGCTTT > AM406671/2122408‑2122699 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |