| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 2,122,558 | C→T | A57T (GCC→ACC) | cfa ← | cyclopropane‑fatty‑acyl‑phospholipid synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 2,122,558 | 0 | C | T | 99.9% | 4518.6 / NA | 1144 | A57T (GCC→ACC) | cfa | cyclopropane‑fatty‑acyl‑phospholipid synthase |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (578/565); total (579/565) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 1145 total aligned reads displayed.
TCCCAAAAGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCGAGGCTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTGCTTTGTTC > AM406671/2122412‑2122703 | cAAAAGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCTGCTAATACCAAGGTTGGCa > 1:4730168/1‑149 (MQ=255) aaaGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCAtt > 2:1246575/1‑149 (MQ=255) aaGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCGTTCATATAAGCCTCAGCTAATACCAAGGTTGGCAAtg > 2:5381701/1‑149 (MQ=255) aaGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATtg > 2:9070864/1‑149 (MQ=255) aaGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATtg > 1:7968962/1‑149 (MQ=255) ttGAGCATTAATTTACCAACGCCAGATTGGTCAGTTAAAAAACTGTCCGTTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATtgatga < 2:2473165/149‑1 (MQ=255) ttGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATtgatga < 1:4911024/149‑1 (MQ=255) ttGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATtgatga < 2:8952977/149‑1 (MQ=255) aGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATaa > 1:3956736/1‑149 (MQ=255) cATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAAt < 1:2591811/149‑1 (MQ=255) aTTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATc > 2:1747997/1‑149 (MQ=255) ttAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCg > 1:723079/1‑149 (MQ=255) ttAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCg < 1:2732515/149‑1 (MQ=255) tAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGc > 1:1952938/1‑149 (MQ=255) aaTTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCt < 2:777514/149‑1 (MQ=255) tttACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTaa > 2:8414071/1‑149 (MQ=255) tttACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTaa > 2:2659465/1‑149 (MQ=255) tttACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTaa > 1:8198710/1‑149 (MQ=255) ttACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTaaa > 2:625244/1‑149 (MQ=255) ttACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTaaa > 2:2023604/1‑149 (MQ=255) tACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAAt > 1:156784/1‑149 (MQ=255) ccAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATga > 2:5840861/1‑149 (MQ=255) aaaGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATgaga > 2:4266583/1‑149 (MQ=255) aaGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGaa > 1:5130390/1‑149 (MQ=255) aGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAAt < 2:7968342/149‑1 (MQ=255) gCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAAtt < 2:5286533/149‑1 (MQ=255) gCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAAtt < 1:6663815/149‑1 (MQ=255) gCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAAtt < 2:3088568/149‑1 (MQ=255) ccAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAAttt > 1:8324795/1‑149 (MQ=255) cAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAAtttt < 2:7130555/149‑1 (MQ=255) aTTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTa > 2:4635189/1‑149 (MQ=255) ttGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTAt > 1:9417272/1‑149 (MQ=255) ttGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTAt < 1:1008278/149‑1 (MQ=255) ggTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTg > 1:6779077/1‑149 (MQ=255) gTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTTTTGa > 2:6625530/1‑149 (MQ=255) gTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGt < 1:7745367/149‑1 (MQ=255) aaaaaaCTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGAt > 1:864422/1‑149 (MQ=255) aaaaaCTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGAtg > 2:2307065/1‑149 (MQ=255) aaaaCTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGAtgt > 2:9299552/1‑149 (MQ=255) aaaaCTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGAtgt < 1:9320297/149‑1 (MQ=255) aaaaCTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGAtgt < 1:9015031/149‑1 (MQ=255) aaaCTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGAtgtg > 2:5131328/1‑149 (MQ=255) aaaCTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGAGAAATCGCTAAATGAGAATTTTTTATTGAAAGTGAtgtg > 1:5910832/1‑149 (MQ=255) aaCTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGa > 2:1107153/1‑149 (MQ=255) tGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAAcc > 1:9183198/1‑149 (MQ=255) gCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGt > 2:9432640/1‑149 (MQ=255) tttACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGttt > 2:8337068/1‑149 (MQ=255) tACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTtct > 1:5487750/1‑149 (MQ=255) aCGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTtctc < 2:7612789/149‑1 (MQ=255) cGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTcc > 2:3790230/1‑149 (MQ=255) cGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTcc > 1:3176060/1‑149 (MQ=255) ggTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCt > 1:6352707/1‑149 (MQ=255) ggTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACATGAGTTTCTCCt > 1:7351257/1‑149 (MQ=255) tAAGCTGATGGAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTACTTc > 1:4575841/1‑149 (MQ=255) tAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTc < 2:2229401/149‑1 (MQ=255) aaGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGGGTTTCCCCTTcc > 2:7273329/1‑148 (MQ=255) aaGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCa < 1:6491561/149‑1 (MQ=255) aGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCAc < 1:3383101/149‑1 (MQ=255) gCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACtt > 2:5584441/1‑149 (MQ=255) aacaaGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACtttt < 1:8039738/149‑1 (MQ=255) aGCTCTTGGATACTCCCGTCAATCTCAATTTCTTCAGTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGt < 2:4810197/149‑1 (MQ=255) ctctTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGttt < 2:5704317/149‑1 (MQ=255) ctctTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGttt < 2:6842003/149‑1 (MQ=255) ctTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACATGAGTTTCTCCTTCACCATACTTTTCTGttttt < 2:7351257/149‑1 (MQ=255) ttgATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTcc < 2:1566696/147‑1 (MQ=255) tGGATACTCCCTTCAATCTCAATTTCCTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGTTGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTcc < 1:6175966/149‑1 (MQ=255) aTACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATc > 1:7540682/1‑149 (MQ=255) tACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATcc < 1:1163460/149‑1 (MQ=255) cTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCa < 1:2894480/149‑1 (MQ=255) ccTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATACATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGCACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATa > 2:1872713/1‑149 (MQ=255) ccTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATa > 2:3255669/1‑149 (MQ=255) cTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATaa > 1:4293139/1‑149 (MQ=255) cTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATaa > 1:3663753/1‑149 (MQ=255) cAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTGCCCATACTTTTCTGTTTTTCTATCACAATAAGTc > 2:8111487/1‑149 (MQ=255) cAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTc > 2:4447654/1‑149 (MQ=255) cAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTc > 2:8735721/1‑149 (MQ=255) aaTCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCa < 2:6373532/149‑1 (MQ=255) aTCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCAc < 1:2031747/149‑1 (MQ=255) ctcAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTg < 1:3799516/149‑1 (MQ=255) tcAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGc > 2:4045237/1‑149 (MQ=255) cAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCa > 2:4968611/1‑149 (MQ=255) cAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCa > 2:1411751/1‑149 (MQ=255) ttcattcaTATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGa > 2:7509453/1‑149 (MQ=255) attcatATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTg < 1:2269423/137‑1 (MQ=255) tcatATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCg > 1:8525116/1‑149 (MQ=255) catATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGa < 1:1374922/149‑1 (MQ=255) atatAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGaa > 1:2459191/1‑149 (MQ=255) tataAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGaaa < 2:613566/149‑1 (MQ=255) taAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGc < 1:4361973/149‑1 (MQ=255) taAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGc > 2:7008710/1‑149 (MQ=255) gCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCTTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAAc > 2:8556859/1‑149 (MQ=255) gCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAAc > 2:5980118/1‑149 (MQ=255) cAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCa > 1:6986858/1‑149 (MQ=255) cAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCa < 1:8825960/149‑1 (MQ=255) tAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTg > 1:5682701/1‑149 (MQ=255) aaTACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTGc > 2:2958712/1‑149 (MQ=255) aaTACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTGc > 1:5263389/1‑149 (MQ=255) aTACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTGCt < 1:3100535/149‑1 (MQ=255) aaGGTTGGCATTGCTGATAAATCGCTAAATGAGAAATGTTTATTGAAAGTGATGTGAACCTGAGCTTCTCCTTCACGATACTTTTCTCTTTTTCCATCCGAATAAGTCCGTTCTCGGGGGATATCGATCGCAAATGTAAGTGCTTTGtt > 2:352010/2‑149 (MQ=255) aaGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTGCTTTGtt < 1:1753559/148‑1 (MQ=255) | TCCCAAAAGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCGAGGCTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTGCTTTGTTC > AM406671/2122412‑2122703 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |