| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 2,492,912 | G→A | A203V (GCA→GTA) | gapB ← | glyceraldehyde 3‑phosphate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 2,492,912 | 0 | G | A | 99.8% | 4969.6 / ‑5.2 | 1251 | A203V (GCA→GTA) | gapB | glyceraldehyde 3‑phosphate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (1/2); new base A (628/618); total (631/620) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 1297 total aligned reads displayed.
TATCAAGGATAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTGCAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGCAAGACAGTT > AM406671/2492766‑2493057 | tCAAGGATAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTacagc < 1:3495346/149‑1 (MQ=255) aaGGATAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCAc < 2:7054214/149‑1 (MQ=255) aaGGATAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCAc > 1:7789261/1‑149 (MQ=255) aGGATAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGCGTTAGGTACGATGTTTTCAGCTACAGCACg > 1:160895/1‑149 (MQ=255) ggATAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGt > 2:2639278/1‑149 (MQ=255) cAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACgg > 1:1016263/1‑149 (MQ=255) ttCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAAt > 2:8324809/1‑149 (MQ=255) gTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTcc < 1:5477535/149‑1 (MQ=255) tCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTcca < 1:9442961/149‑1 (MQ=255) tCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTcca < 2:9331672/149‑1 (MQ=255) cAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTccac > 1:4622839/1‑149 (MQ=255) aTGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTccacca > 1:9271005/1‑149 (MQ=255) ccAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGgtg < 1:6260140/149‑1 (MQ=255) ccAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGgtg < 2:7660703/149‑1 (MQ=255) ccAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGgtg < 2:4290547/149‑1 (MQ=255) ggAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGcc > 1:6591230/1‑149 (MQ=255) gAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCa > 1:9609422/1‑149 (MQ=255) aaCTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACACGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGGGGGCCAt < 2:1067985/149‑1 (MQ=255) aaCTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCAt < 1:8890825/149‑1 (MQ=255) aaCTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCAt > 1:6771602/1‑149 (MQ=255) aCTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATc < 2:5299751/149‑1 (MQ=255) cTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCa < 2:4753200/149‑1 (MQ=255) cTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCa < 1:8014561/149‑1 (MQ=255) cacGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTc > 1:1100091/1‑149 (MQ=255) acGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCa > 2:4983039/1‑149 (MQ=255) cGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCAt < 1:383631/149‑1 (MQ=255) cGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCAt < 1:8741007/149‑1 (MQ=255) ttGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCAttt < 1:3965985/149‑1 (MQ=255) ttGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCAttt < 1:7015926/149‑1 (MQ=255) aTGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCAc < 1:2869349/149‑1 (MQ=255) ccTTGAAGTTTAACTTGAAGTTCTGGCAATACAAGACCGATGGCTTGAGAAGCACCTGTTGAGGAAGGTACGATGATTTCAGCTATAGCACGTGAGCGACGAAAATCTCTAACACGGTGTGGGCAATCAAGAGTCATTTGTTCATCAgt > 2:6454399/1‑149 (MQ=255) tGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTa < 2:6591230/149‑1 (MQ=255) gTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCg > 2:9200618/1‑149 (MQ=255) tttACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGt > 1:3267785/1‑149 (MQ=255) tttACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGt > 1:7134539/1‑149 (MQ=255) tttACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGt > 2:4400882/1‑149 (MQ=255) cTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACt > 2:8658831/1‑149 (MQ=255) ttGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTg < 1:1354374/149‑1 (MQ=255) tGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGt > 1:4921967/1‑149 (MQ=255) aaGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAg > 1:9092011/1‑149 (MQ=255) gTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTc > 2:364833/1‑149 (MQ=255) ttCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCa < 1:8452436/149‑1 (MQ=255) tCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCAt > 2:8860428/1‑149 (MQ=255) tGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTg > 2:1531862/1‑149 (MQ=255) ggCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGATTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACTGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGt < 2:416796/149‑1 (MQ=255) ggCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGt > 2:6158137/1‑149 (MQ=255) cAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTAc < 2:3475343/149‑1 (MQ=255) aaTACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTAcc > 1:2054830/1‑149 (MQ=255) tACAGGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCaa < 1:5167137/149‑1 (MQ=255) aCAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAAc > 1:607056/1‑149 (MQ=255) cAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACt < 2:5511838/149‑1 (MQ=255) cAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGGAGTCATTGTACCAACt > 1:6451885/1‑149 (MQ=255) aGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCGAGAGTCACTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACttt < 2:6921401/149‑1 (MQ=255) gACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCAGTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTg < 2:254044/149‑1 (MQ=255) aCCGGTGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGa < 2:3781669/149‑1 (MQ=255) cGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATa < 1:8579689/149‑1 (MQ=255) cGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATa < 1:1797276/149‑1 (MQ=255) taTGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATAc < 2:2062399/148‑1 (MQ=255) aTGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTAc < 1:4766132/136‑1 (MQ=255) tGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCg > 1:3054187/1‑149 (MQ=255) tGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCg > 2:5039139/1‑149 (MQ=255) tGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCg > 1:2235916/1‑149 (MQ=255) tGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCg > 1:8184000/1‑149 (MQ=255) ggCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGa < 2:2333770/149‑1 (MQ=255) tAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAAttgt > 1:2522749/1‑149 (MQ=255) cagcaCCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAAttgtttg > 1:3665895/1‑149 (MQ=255) cagcaCCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAAttgtttg < 1:5770632/149‑1 (MQ=255) agcaCCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAAttgtttgt < 2:3230312/149‑1 (MQ=255) agcaCCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAAttgtttgt > 1:7321278/1‑149 (MQ=255) gcaCCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAAttgtttgt > 1:2695075/1‑148 (MQ=255) caCCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTc < 1:5635460/149‑1 (MQ=255) caCCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGAGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGAAACCGAATTGTTTGTTc > 2:5152505/1‑149 (MQ=255) tttttGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCaaa < 2:220606/146‑1 (MQ=255) cTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCaaa < 1:4230612/149‑1 (MQ=255) tGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAg < 2:5717316/149‑1 (MQ=255) tGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAg < 2:2811190/149‑1 (MQ=255) gTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGt > 2:1881198/1‑149 (MQ=255) ttGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTa > 1:4428754/1‑149 (MQ=255) ttGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTa < 2:1648119/149‑1 (MQ=255) tGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTAt > 2:8177995/1‑149 (MQ=255) gAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATc < 2:9046750/149‑1 (MQ=255) gAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATc < 1:1944262/149‑1 (MQ=255) aGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCa > 2:2977633/1‑149 (MQ=255) gTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAg < 1:7638959/149‑1 (MQ=255) tAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGcc < 1:530550/149‑1 (MQ=255) aGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCa < 2:7259764/149‑1 (MQ=255) ggTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCAt > 2:4030957/1‑149 (MQ=255) ggTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCAt < 1:5919582/149‑1 (MQ=255) gTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCAtt > 2:7897553/1‑149 (MQ=255) gTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCAtt < 2:5904990/149‑1 (MQ=255) aCGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTgg < 1:8320129/149‑1 (MQ=255) gATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAg < 1:7512067/149‑1 (MQ=255) aTGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGc > 1:4090939/1‑149 (MQ=255) aTGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTCGGTCACCAGTGTAACCGTGAACTGTCGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCCAAGTATCAGCCATTGGAga > 2:7510551/1‑148 (MQ=255) tgtgTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGCa < 2:84898/149‑1 (MQ=255) tGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCCCCACGGTGTGGGCCATCACGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTAGCAACTTTGATACCGACTTGTTTGCTCAAAGTATCAGCCATTGGAGCa > 2:1269683/1‑149 (MQ=37) tGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGCa > 2:3895386/1‑149 (MQ=255) ttttCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGCAAg > 2:6341704/1‑149 (MQ=255) cAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGCAAGACAg > 2:4551773/1‑149 (MQ=255) aGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTGGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTGCCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGCAAGACAgt < 1:5088828/149‑1 (MQ=255) | TATCAAGGATAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTGCAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGCAAGACAGTT > AM406671/2492766‑2493057 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |