Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | AM406671 | 1,933,214 | 2 bp→CG | coding (224‑225/714 nt) | atpB ← | ATP synthase F0, A subunit |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AM406671 | 1,933,214 | 0 | G | C | 99.9% | 3844.0 / NA | 922 | G75A (GGC→GCG) | atpB | ATP synthase F0, A subunit |
Reads supporting (aligned to +/- strand): ref base G (1/0); new base C (497/424); total (498/424) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | AM406671 | 1,933,215 | 0 | C | G | 99.9% | 3815.5 / NA | 922 | G75A (GGC→GCG) | atpB | ATP synthase F0, A subunit |
Reads supporting (aligned to +/- strand): ref base C (0/1); new base G (498/422); total (498/424) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.59e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 922 total aligned reads displayed.
ACAAGAAGTGCAAGTGTCAAATCGACTGTTGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGGCCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGCGGCTCGCCCAGAATACCAGACCGAAAACAAT > AM406671/1933071‑1933357 || aagaagTGCAAGTGTCAAATCGACTGTTGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGc < 1:5865823/149‑1 (MQ=255) agaagTGCAAGTGTCAAATCGACTGTTGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCg > 1:754395/1‑149 (MQ=255) gaagTGCAAGTGTCAAATCGACTGTTGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCgt > 1:3141051/1‑149 (MQ=255) agTGCAAGTGTCAAATCGACTGTTGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCgtgg > 2:8502783/1‑149 (MQ=255) agTGCAAGTGTCAAATCGACTGTTGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCgtgg < 2:5108816/149‑1 (MQ=255) agTGCAAGTGTCAAATCGACTGTTGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCgtgg > 1:8584238/1‑149 (MQ=255) gTGCAAGTGTCAAATCGACTGTTGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCgtggt < 2:1448889/149‑1 (MQ=255) tGCAAGTGTCAAATCGACTGTTGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCgtggtg > 2:2882114/1‑149 (MQ=255) cAAGTGTCAAATCGACTGTTGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCt < 2:1810369/149‑1 (MQ=255) aggtgtCAAATCGACTGTTGGATTTGCAGTGTGTGATTTCCAAAGGGGAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCtt < 1:4402131/147‑1 (MQ=255) tCAAATCGACTGTTGGATTTGCAGTTCGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTNCATGAGCGCAAAGCGTGGTGCTTCATGa < 1:5377929/149‑1 (MQ=255) cAAATCGACTGTTGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAg > 1:8504310/1‑149 (MQ=255) aaaTCGACTGTTGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAgg < 2:739893/149‑1 (MQ=255) aTCGACTGTTGAATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGc < 2:4220639/149‑1 (MQ=255) tCGACTGTTGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGcc > 1:6856293/1‑149 (MQ=255) cGACTGTTGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCg < 1:1444109/149‑1 (MQ=255) gACTGTTGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGa < 1:7214508/149‑1 (MQ=255) cTGTTGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACg < 2:7920745/149‑1 (MQ=255) cTGTTGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACg > 1:1923064/1‑149 (MQ=255) cTGTTGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCAAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACg > 2:1684583/1‑149 (MQ=255) gTTGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGtt < 1:6682148/149‑1 (MQ=255) gTTGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGtt < 2:6580587/149‑1 (MQ=255) tGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTAt < 2:6006952/149‑1 (MQ=255) gATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCt < 1:1627684/149‑1 (MQ=255) tGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTgg < 2:2110261/149‑1 (MQ=255) gCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGa < 2:3022465/149‑1 (MQ=255) gCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGa < 2:9278862/149‑1 (MQ=255) gTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAAc > 1:8738677/1‑149 (MQ=255) ttGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACt > 2:6113564/1‑149 (MQ=255) tGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGATGTTATCTTTGGAAACTc < 2:4953768/149‑1 (MQ=255) tGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTc > 1:3744045/1‑149 (MQ=255) ggTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTcc > 2:3853111/1‑149 (MQ=255) gTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCa > 2:8410365/1‑149 (MQ=255) tGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCAt > 1:6534022/1‑149 (MQ=255) tGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCAt > 1:2870747/1‑149 (MQ=255) aTTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTTATGAGGGCCGACGTTATCTTTGGAAACTCCATTg > 2:2673399/1‑149 (MQ=255) aaGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAAt > 1:9051451/1‑149 (MQ=255) agagAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATc > 1:5509216/1‑149 (MQ=255) gagaAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATca < 1:8300907/149‑1 (MQ=255) gaAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATcaac > 2:3303852/1‑149 (MQ=255) aaCATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATcaacaa < 1:9504733/149‑1 (MQ=255) gaTCACCGGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCACTAAGAAGGAAAGAAAGGAGGGTAAAGTTAATGAGCGCAAAGCGTGGTGGTTCATGAGGGCCGCCGTTATCTTTGGAAACTCTACTGACAAAATCAACAAcc > 2:4321638/2‑149 (MQ=255) aTCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAAccc < 1:6206982/149‑1 (MQ=255) tCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCa < 2:2759329/149‑1 (MQ=255) aCCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACt < 2:718580/149‑1 (MQ=255) aCCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACt > 2:7725396/1‑149 (MQ=255) ccTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTc > 1:4977427/1‑149 (MQ=255) cTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCa < 1:733354/149‑1 (MQ=255) aCTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTAAAGAACAt > 2:3679302/1‑149 (MQ=255) cTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACAtt < 2:1121787/149‑1 (MQ=255) cTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACAtt < 2:6774349/149‑1 (MQ=255) cTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACAtt < 1:1029229/149‑1 (MQ=255) aaTTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACAtttt < 1:6033172/149‑1 (MQ=255) aaTTTTAGTTACTAGCACAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAAAAtttt > 2:2325040/1‑149 (MQ=255) tttAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGtt > 1:3551507/1‑149 (MQ=255) ttAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGttt > 2:6247513/1‑149 (MQ=255) aGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTAc < 2:4830322/149‑1 (MQ=255) gTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGTGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTAcc > 1:4004316/1‑149 (MQ=255) ttACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCt > 1:4265040/1‑149 (MQ=255) tACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCtt < 1:9251549/149‑1 (MQ=255) aCTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCttt > 1:2541108/1‑149 (MQ=255) cTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTg < 2:754395/149‑1 (MQ=255) cTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTg > 2:9435098/1‑149 (MQ=255) cTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTg > 1:5111204/1‑149 (MQ=255) tAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACACCCCACTCAAGAACATTTTGTTTACATTCgg > 2:25390/1‑149 (MQ=255) tAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAACGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTgg > 1:5675691/1‑149 (MQ=255) aGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTggg < 2:8124520/149‑1 (MQ=255) gCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGc < 2:6350260/149‑1 (MQ=255) cAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTg < 1:2181902/149‑1 (MQ=255) cAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTg < 2:6865411/149‑1 (MQ=255) aaTGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGa > 1:7925234/1‑149 (MQ=255) aaTGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGa < 2:3492819/149‑1 (MQ=255) aTGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAg > 1:480132/1‑149 (MQ=255) tGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGc > 2:5314993/1‑149 (MQ=255) aGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGc < 2:5704628/149‑1 (MQ=255) ttGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCat > 1:3307994/1‑149 (MQ=255) tGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCata < 1:4140960/149‑1 (MQ=255) cAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCatatgg < 2:8606181/149‑3 (MQ=255) aaTAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGc < 2:5536023/149‑1 (MQ=255) tAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGCgg > 2:4060780/1‑149 (MQ=255) ggAAAGAAAAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGCGGCTCGcc > 2:8032864/1‑149 (MQ=255) gaaagaaaAGAGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGCGGCTCGccc < 1:9435098/149‑1 (MQ=255) aaagaaaagaGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGc > 2:8725379/1‑129 (MQ=255) aaagaaaagaGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGCGGCTCGCCCa > 1:7038802/1‑149 (MQ=255) agaaaagaGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGCGGCTCGCCCAGa < 1:2616210/149‑1 (MQ=255) aaaagaGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGTAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGCGGCTCGCCCAGAAt > 1:5768682/1‑149 (MQ=255) aaaagaGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGCGGCTCGCCCAGAAt > 1:8072090/1‑149 (MQ=255) aaagaGGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGCGGCTCGCCCAGAATa < 2:1271399/149‑1 (MQ=255) agagGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGCGGCTCGCCCAGAATAcc < 2:4647564/149‑1 (MQ=255) gagGGTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGCGGCTCGCCCAGAATACCa < 1:2306810/149‑1 (MQ=255) gTAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGCGGCTCGCCCAGAATACCAGAcc < 1:4535528/149‑1 (MQ=255) tAAAGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGCGGCTCGCCCAGAATACCAGACCg < 2:7001162/149‑1 (MQ=255) aaaGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGCGGCTCGCCCAGAATACCAGACCGa < 1:1761052/149‑1 (MQ=255) aaaGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGCGGCTCGCCCAGAATACCAGACCGa > 1:118860/1‑149 (MQ=255) aaaGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGCGGCTCGCCCAGAATACCAGACCGa > 1:775623/1‑149 (MQ=255) aaaGTTCATGAGCGCAAAGCGCGGTGCTTCATGAGGGCCGACGTTATCTTTGGCAACTCCATTGACAACATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGCGCTGCATCTTGCGGCTCCCCCAGAATACCAGACCgc > 2:8957852/1‑148 (MQ=255) aGTTCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGCGGCTCGCCCAGAATACCAGACCGaaa > 2:9119335/1‑149 (MQ=255) ttCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGCGGCTCGCCCAGAATACCAGACCGaaaaa > 2:4515524/1‑148 (MQ=255) ttCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGCGGCTCGCCCAGAATACCAGACCGAAAAc < 2:8248764/149‑1 (MQ=255) tCATGAGCGCAAAGCGTGGTGCTTCATGAGGGCCGACGGTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGCGGCTCGCCTGGAATACCCGACCGGAAACa > 2:1968402/1‑149 (MQ=255) || ACAAGAAGTGCAAGTGTCAAATCGACTGTTGGATTTGCAGTTGGTGATTTCCAAAGAGAAACATCACCTGGCGTACTAATTTTAGTTACTAGCCCAATGCAGTTGGCAATAAGAAGGAAAGAAAAGAGGGTAAAGTTCATGAGGCCAAAGCGTGGTGCTTCATGAGGGCCGACGTTATCTTTGGAAACTCCATTGACAAAATCAACAACCCACTCAAGAACATTTTGTTTACCTTTGGGCTTGAGCTGCATATTGCGGCTCGCCCAGAATACCAGACCGAAAACAAT > AM406671/1933071‑1933357 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |