| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 732,731 | +C | coding (210/975 nt) | malR → | putative maltose operon transcriptional repressor, LacI family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 732,730 | 1 | . | C | 99.4% | 4476.2 / 10.0 | 1102 | coding (209/975 nt) | malR | putative maltose operon transcriptional repressor, LacI family |
| Reads supporting (aligned to +/- strand): ref base . (4/3); new base C (572/519); total (579/523) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 1148 total aligned reads displayed.
CGAGTCATTAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGT‑CGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCAATTTTCCG > AM406671/732582‑732873 | cGAGTCATTAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGt < 1:3340125/149‑1 (MQ=255)cGAGTCATTAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGt < 2:2135880/149‑1 (MQ=255)cGAGTCATTAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGt > 1:5269803/1‑149 (MQ=255) aGTCATTAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGT‑cc > 2:8171162/1‑148 (MQ=255) tCATTAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGT‑ccgc > 1:1598216/1‑146 (MQ=255) ttAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGa > 2:6957414/1‑149 (MQ=255) aaaGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACa < 1:1984748/149‑1 (MQ=255) aaGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACaa > 1:8040880/1‑149 (MQ=255) aaGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACaa < 1:1259840/149‑1 (MQ=255) gACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAg > 1:4961239/1‑149 (MQ=255) gACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAg > 1:5986996/1‑149 (MQ=255) aGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGCCGTAATGGAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACGAAGCaa > 2:7179349/1‑149 (MQ=255) gTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAg < 1:4516877/149‑1 (MQ=255) gTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGAGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAg < 2:1332334/149‑1 (MQ=255) tCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTc > 2:3842180/1‑149 (MQ=255) cAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCa < 1:10664163/149‑1 (MQ=255) aGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCaa > 1:4226884/1‑149 (MQ=255) aGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCaa > 1:3150265/1‑149 (MQ=255) gAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAAc > 2:8360560/1‑149 (MQ=255) aaaTTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAAcc < 1:3727698/149‑1 (MQ=255) aTAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTAt > 2:9616030/1‑149 (MQ=255) aaaaCGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTAAAGATTAAAGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGa < 2:10289944/149‑1 (MQ=255) aaaCGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGaa > 2:9756967/1‑149 (MQ=255) aaCGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGaaa > 2:898996/1‑149 (MQ=255) aaCGAAAGTAAAAGTTCGCAAAGCCAGGCATGAATTGTGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGaaa < 2:3655716/149‑1 (MQ=255) aGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTg < 1:2178657/149‑1 (MQ=255) aaaGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCt < 2:2368400/149‑1 (MQ=255) aGTTCGCAAAGCCCTGCATGGATTGGGATATCGTCGTAATGCAGCGGCTCGGATTCTAGGTTCCGGGAAGACAAATACCATTAGAGTTGCCTTTCCCGCGGTGCGCCGAAAAAGCAGTTCGACCGTTCATTATGAAAATTTTGCCCtcg > 2:2902207/1‑148 (MQ=255) gTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCtcaa < 1:7084963/149‑1 (MQ=255) ttCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCtcaat > 2:1633293/1‑149 (MQ=255) ttCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCtcaat > 1:4315500/1‑149 (MQ=255) cAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTcaatcaat > 2:10867431/1‑149 (MQ=255) cAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTcaatcaat > 2:8609359/1‑149 (MQ=255) cAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTcaatcaat > 2:4260125/1‑149 (MQ=255) aaGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGa > 1:10483644/1‑149 (MQ=255) aGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGaa > 2:6589859/1‑149 (MQ=255) gCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCCTTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGaaa > 2:3391175/1‑149 (MQ=255) ccATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAAc > 1:5693037/1‑149 (MQ=255) atgcatgAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTg > 1:8453017/1‑149 (MQ=255) catgAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTc > 1:7750133/1‑149 (MQ=255) atgAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCg < 1:7568652/149‑1 (MQ=255) gAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCggg < 2:9478795/149‑1 (MQ=255) gAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCggg > 2:10450608/1‑149 (MQ=255) ttGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGAtt < 1:9924095/149‑1 (MQ=255) tGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTa > 1:8982995/1‑149 (MQ=255) ttATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTatgat < 1:1764932/149‑1 (MQ=255) ttATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTatgat < 2:1935220/149‑1 (MQ=255) tATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTatgatg > 2:10691962/1‑149 (MQ=255) aTCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGAtgt < 2:6080505/149‑1 (MQ=255) tcgtcgTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGAtgtg > 2:525195/1‑149 (MQ=255) cgtcgtAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATgtgt > 1:1347283/1‑149 (MQ=255) tcgtAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCg > 2:6398970/1‑149 (MQ=255) tcgtAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCg < 1:4066482/149‑1 (MQ=255) cgtAATGCAGCGGCTCAGATCCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGa > 1:2744817/1‑149 (MQ=255) gtcgtGCAGCGGCTGAGATTCTGGCGGCTGGAAACGCAAATGCCATTGGTGTTGTCGTGCTCCCGGTCCGCCGACAAAGCGTGTCACGCTTTCTTGATGAAAATTTTGACGTCGATCAATGAAACTGCTCGGGATTATGATGTGTCGAt < 2:10161316/145‑1 (MQ=255) tAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGAtt > 1:6450153/1‑149 (MQ=255) tGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCt > 2:5373260/1‑149 (MQ=255) gCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCGCGGGATTATGATGTGTCGATTGCTa < 2:6285410/149‑1 (MQ=255) aGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATc < 2:11289579/149‑1 (MQ=255) gCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATcg < 2:2589797/149‑1 (MQ=255) gCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATcg > 1:4809718/1‑149 (MQ=255) cGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATcgc > 2:3131854/1‑149 (MQ=255) tCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACg < 1:7360829/149‑1 (MQ=255) tCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACAt > 1:9235202/1‑149 (MQ=255) tAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCGACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtc > 2:7599248/1‑149 (MQ=255) tAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtc > 1:3600874/1‑149 (MQ=255) aGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCACCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtcg < 2:4551752/149‑1 (MQ=255) gCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtcgg < 2:8738765/149‑1 (MQ=255) cTGGAAAAACAAATACCATTGGAGTTGTCTTTGCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCACGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtcggtcgg < 2:5820252/149‑1 (MQ=255) cTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtcggtcgg > 1:8749826/1‑149 (MQ=255) tagAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGga < 1:10814992/147‑1 (MQ=255) tGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGGCCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGga < 1:100125/149‑1 (MQ=255) tGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTATCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGAGGTGTCGATTGCGATCGCGACGGGACATTCGGTCGga < 1:5443818/149‑1 (MQ=255) ggAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGgag < 2:4437521/149‑1 (MQ=255) ggAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGgag < 2:9168955/149‑1 (MQ=255) aaaaCAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAAt < 2:484014/149‑1 (MQ=255) aaaCAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGCAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAAtt < 1:6740319/149‑1 (MQ=255) aaCAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGCATTa > 2:3571397/1‑149 (MQ=255) aaCAAATACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTa < 1:2921484/149‑1 (MQ=255) aaCAAATACCATTGCAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTa < 1:582110/149‑1 (MQ=255) aaaTACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAaag < 2:11136138/149‑1 (MQ=255) aaaTACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAaag < 1:6193099/149‑1 (MQ=255) tACCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAaagaag < 2:8067169/149‑1 (MQ=255) aCCATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGc < 1:8319291/149‑1 (MQ=255) ccATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCa > 1:2320734/1‑149 (MQ=255) ccATTGGAGTTGTCTTGCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAAGCAATGAATCTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCa < 2:2776820/149‑1 (MQ=255) cATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCaa > 2:6719187/1‑149 (MQ=255) cATTGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCaa > 1:964711/1‑149 (MQ=255) ttGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGt < 1:9448911/149‑1 (MQ=255) ttGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGt < 1:6827964/149‑1 (MQ=255) tGGAGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGtt > 2:7808632/1‑149 (MQ=255) aGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGaa > 2:4089401/1‑149 (MQ=255) aGTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGaa > 1:11220565/1‑149 (MQ=255) gTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGCATTAAAGAAGCAAGTTGAAc > 1:1025552/1‑149 (MQ=255) gTTGTCTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAAc < 1:4663624/149‑1 (MQ=255) tGTCTTTCCCCCGGGCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACtt < 2:5006185/149‑1 (MQ=255) cTTTCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCaa > 1:11026915/1‑149 (MQ=255) ttCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCAAtt > 2:5615535/1‑149 (MQ=255) tCCCCCGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCAAttt > 1:2568482/1‑149 (MQ=255) cccGGTCCGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCAATTTTcc > 2:73756/1‑149 (MQ=255) | CGAGTCATTAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCCGGT‑CGCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCAATTTTCCG > AM406671/732582‑732873 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |