BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM406671	1583930 =	NA (NA)	1199 (0.920)	261/294	0.4	NA	intergenic (‑98/‑80)	glf2/tnp712	pseudogene/transposase for insertion sequence element IS712G
*	?	AM406671	1632643 =	NA (NA)	1199 (0.920)	261/294	0.4	NA	coding (132/261 nt)	llmg_1655	conserved hypothetical protein

Only 100 of 1109 total aligned reads displayed.

AGGACCACTCCCCACGATAAGATAATCATAATTTTTTGTGTTATATTTCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCTTATGACTGGAATTAAACCTAATTTCGCTGA  >  AM406671/1583782‑1584077

 ggACCACTCCCCACGATAAGATAATCATAATTTTTTGTGTTATATTTCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAgtg                                                                                                                                                    <  1:6706481/149‑1 (MQ=255)

  gACCACTCCCCACGATAAGATAATCATAATTTTTTGTGTTATATTTCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAgtgt                                                                                                                                                   <  1:1153235/149‑1 (MQ=255)

         ccccACGATAAGATAATCATAATTTTTTGTGTTATATTTCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAAGAAGTAAAAGAATCACTAAGTGTAAAGGGc                                                                                                                                            <  1:4320130/149‑1 (MQ=255)

          cccACGATAAGATAATCATAATTTTTTGTGTTATATTTCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGcc                                                                                                                                           <  1:7369004/149‑1 (MQ=255)

                 taagataaTCATAATTTTTTGTGTTATATTTCATTATTTTTCCCTTTTCTAGCTATCTGCTGCTTCTTCTTACATTATCTGTCTTAGGGCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTaa                                                                                                                                    <  2:7314492/149‑1 (MQ=255)

                  aagataaTCATAATTTTTTGTGTTATATTTCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTaaa                                                                                                                                   >  2:10347367/1‑149 (MQ=255)

                   agataaTCATAATTTTTTGTGTTATATTTCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTaaaa                                                                                                                                  >  2:10002546/1‑149 (MQ=255)

                        aTCATAATTTTTTGTGTTATATTTCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAg                                                                                                                             >  2:3513190/1‑149 (MQ=255)

                         tCATAATTTTTTGTGTTATATTTCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAgg                                                                                                                            <  1:10647196/149‑1 (MQ=255)

                         tCATAATTTTTTGTGTTATATTTCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAgg                                                                                                                            <  1:3546789/149‑1 (MQ=255)

                         tCATAATTTTTTGTGTTATATTTCATTATTTTTCCCTTTTCTACCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTGCTCACGATAACAATAAGTAAAAGCATCACTACGTGTAAAGGGCCATGCTAAAATGTAgg                                                                                                                            <  2:1606700/149‑1 (MQ=255)

                            tAATTTTTTGTGTTATATTTCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGaaa                                                                                                                         <  1:8915343/149‑1 (MQ=255)

                               ttttttttttTATATTTCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACgg                                                                                                                      >  2:10198240/1‑149 (MQ=255)

                                tttttGTGTTATATTTCATTTTTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTGTTTCTCACGATATCAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTACAATGTAGGAAACggg                                                                                                                     <  2:9831773/149‑1 (MQ=255)

                                  tttGTGTTATATTTCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGcc                                                                                                                   <  2:2958633/149‑1 (MQ=255)

                                   ttGTGTTATATTTCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCa                                                                                                                  <  1:11161561/149‑1 (MQ=255)

                                    tgtgTTATATTTCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCac                                                                                                                 >  2:8429483/1‑148 (MQ=255)

                                     gcgtTATATTTCCTTATTTTTCCCTTTTCTAGCTATCTCCTGCTAGTTCCTACGTTATCTGTCTTAGGTAGTCTTATTCTCACGATAGCAGTAAGCACAAGACTCGTTGACTGAAAAGGGCCATTCTAAAAAGTAGGAAACGCGCCagg                                                                                                                >  2:8264277/3‑147 (MQ=255)

                                      tgtTATATTTCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTg                                                                                                               <  2:267287/149‑1 (MQ=255)

                                       gtTATATTTCATTATTTTTCCCTTTTGTAGCTATATTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAGGTGTAAAGGTCCATGCTAAAATGTAGGAAACGGGCCATTGa                                                                                                              >  2:2468530/1‑149 (MQ=255)

                                          atatTTCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGaaaa                                                                                                           >  2:4112229/1‑149 (MQ=255)

                                           tatTTCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAAt                                                                                                          >  2:366327/1‑149 (MQ=255)

                                             tttCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGt                                                                                                        <  2:4710685/149‑1 (MQ=255)

                                             tttCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGt                                                                                                        >  2:9386913/1‑149 (MQ=255)

                                             tttCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGt                                                                                                        <  2:7557417/149‑1 (MQ=255)

                                                cATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAATAATAAGTAAAAGAAACACTAAGAGTAAAGGACCATGCTAAAATGTAGGAAAAGGGACATTGAAAATGTAgg                                                                                                     >  2:9166794/1‑149 (MQ=255)

                                                cATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAgg                                                                                                     <  1:7903166/149‑1 (MQ=255)

                                                 attattTTTCTTTTTTCTTGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCATTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTTAAAATGTAGGt                                                                                                    >  2:4429452/1‑149 (MQ=38)

                                                 attattTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGt                                                                                                    >  2:4582440/1‑149 (MQ=255)

                                                  ttattTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGtt                                                                                                   >  2:2040270/1‑149 (MQ=255)

                                                  ttattTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGCCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGACACGGGCCATTGAAAATGTAGGtt                                                                                                   <  2:6257136/149‑1 (MQ=255)

                                                   tattTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTa                                                                                                  <  1:7077778/149‑1 (MQ=255)

                                                    attTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTaa                                                                                                 <  1:2988752/149‑1 (MQ=255)

                                                    attTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTaa                                                                                                 >  1:8632385/1‑149 (MQ=255)

                                                     tttttCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAAc                                                                                                >  1:3811050/1‑149 (MQ=255)

                                                      ttttCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTCAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACt                                                                                               <  1:5885225/149‑1 (MQ=255)

                                                       tttCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACtt                                                                                              >  1:2020358/1‑149 (MQ=255)

                                                        ttaccTTTTCAAGCTATATTCTGCTAATTCTTACATTAACTGTCTTAGGTCGTCTTTTTCTCACGAAAAAAATAAGTAAAAGAATAACTAAGTGTAAAAGGCCATGCCAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACttt                                                                                             >  2:2240863/4‑149 (MQ=25)

                                                           ccTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTaaa                                                                                          >  1:4761030/1‑149 (MQ=255)

                                                               ttCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATtg                                                                                      >  1:10956984/1‑149 (MQ=255)

                                                               ttCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACAGGCCATTGAAAATGTAGGTTAACTTTAAAATtg                                                                                      <  2:6598193/149‑1 (MQ=255)

                                                               ttCGAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATtg                                                                                      <  2:5610251/149‑1 (MQ=255)

                                                                 cTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATtgtg                                                                                    >  2:2797452/1‑149 (MQ=255)

                                                                  tAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGa                                                                                   <  2:5947712/149‑1 (MQ=255)

                                                                  tAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGa                                                                                   >  1:9435079/1‑149 (MQ=255)

                                                                    gCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATa                                                                                 <  2:8613033/149‑1 (MQ=255)

                                                                     cTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAg                                                                                >  2:6770493/1‑149 (MQ=255)

                                                                         cttctGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCtt                                                                            >  1:7512516/1‑149 (MQ=255)

                                                                         cttctGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCtt                                                                            <  1:2244112/149‑1 (MQ=255)

                                                                                    tcttACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATgag                                                                 <  1:9638296/149‑1 (MQ=255)

                                                                                     cttACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATgaga                                                                >  1:3205288/1‑149 (MQ=255)

                                                                                      ttACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGaa                                                               <  1:6471386/149‑1 (MQ=255)

                                                                                        aCATTCTCCGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGaaaa                                                             <  1:1797951/149‑1 (MQ=255)

                                                                                        aCATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGaaaa                                                             >  1:146799/1‑149 (MQ=255)

                                                                                         cATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAg                                                            <  1:3402602/149‑1 (MQ=255)

                                                                                           ttATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGATTCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGAc                                                          >  1:6277068/1‑149 (MQ=255)

                                                                                           ttATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAACATGCAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGAc                                                          <  2:7166479/149‑1 (MQ=255)

                                                                                           ttATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAGCTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGAc                                                          >  1:8281448/1‑149 (MQ=255)

                                                                                           ttATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGAc                                                          >  1:1646563/1‑149 (MQ=255)

                                                                                            tATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACa                                                         >  1:5286278/1‑149 (MQ=255)

                                                                                             aTCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACAt                                                        >  1:2542260/1‑149 (MQ=255)

                                                                                               ttGTCTTTGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATcc                                                      <  1:9258966/148‑1 (MQ=255)

                                                                                               cTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATcc                                                      >  2:8982623/1‑149 (MQ=255)

                                                                                                 gTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTa                                                    <  2:4270606/149‑1 (MQ=255)

                                                                                                   cTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCGTATGAGAAAAGACATCCTAGa                                                  >  2:7768229/1‑149 (MQ=255)

                                                                                                    ttAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGaa                                                 <  1:1030694/149‑1 (MQ=255)

                                                                                                      aGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAg                                               >  2:1895320/1‑149 (MQ=255)

                                                                                                       ggTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGt                                              >  1:9117788/1‑149 (MQ=255)

                                                                                                       ggTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAAGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGt                                              >  1:7764765/1‑149 (MQ=255)

                                                                                                        gtcgtcTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGta                                             >  1:4012826/1‑149 (MQ=255)

                                                                                                          cgtcTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGtata                                           <  1:10002546/149‑1 (MQ=255)

                                                                                                            tcTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATGAc                                         >  1:7637678/1‑149 (MQ=255)

                                                                                                            tcTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAAc                                         <  2:7906414/149‑1 (MQ=255)

                                                                                                            tcTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTGAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAAc                                         <  2:6435996/149‑1 (MQ=255)

                                                                                                              tttttCTCACGATAACAATAAGTAATAGAATCACTTGGTGTAAAGGGCCATGCTAATATGTAGGAAACGGGCTATTGAAAATGTAGGTTATCTTTAATATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCg                                       <  2:11232352/149‑1 (MQ=17)

                                                                                                               ttttCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGa                                      >  1:134061/1‑149 (MQ=255)

                                                                                                                 ttCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAAc                                    >  1:8011555/1‑149 (MQ=255)

                                                                                                                   ctcGCGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACAt                                  <  2:10757732/149‑1 (MQ=255)

                                                                                                                      aCGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCtt                               <  2:3230042/149‑1 (MQ=255)

                                                                                                                      aCGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCtt                               <  2:10955400/149‑1 (MQ=255)

                                                                                                                      aCGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCtt                               <  2:5040555/149‑1 (MQ=255)

                                                                                                                      aCGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCtt                               >  1:4996358/1‑149 (MQ=255)

                                                                                                                       agATAACAATAAGTAAAAGAATCACTAAGTAGAAAGGGCCATGCTAAAATGTAGGATACGGGTCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCATTATGAGAAAAGACATCCTAAAAAGTATACCCGAACATCTTa                              <  2:10514230/148‑1 (MQ=17)

                                                                                                                           accAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCTTATGAc                          <  2:135888/147‑1 (MQ=255)

                                                                                                                            aCAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTGAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCTTATGACt                         <  1:7225683/149‑1 (MQ=255)

                                                                                                                               aTAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCTTATGACTGGa                      >  1:4520215/1‑149 (MQ=255)

                                                                                                                                 aaGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCTTATGACTGGAAt                    >  1:9790737/1‑149 (MQ=255)

                                                                                                                                 aaGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACATTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCTTATGACTGGAAt                    <  2:3856559/149‑1 (MQ=255)

                                                                                                                                 aaGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGGTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCTTATGACTGGAAt                    >  1:5698184/1‑149 (MQ=255)

                                                                                                                                     aaaaGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCTTATGACTg                        <  2:5420579/141‑1 (MQ=255)

                                                                                                                                        aGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCTTATGACTGGAATTAAACCt             >  1:6937079/1‑149 (MQ=39)

                                                                                                                                        aGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCTTATGACTGGAATTAAACCt             >  1:4224965/1‑149 (MQ=39)

                                                                                                                                            tCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCTTATGACTGGAATTAAACCTAAtt         <  1:8467939/149‑1 (MQ=35)

                                                                                                                                            tCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCTTATGACTGGAATTAAAACTAAtt         >  2:6940647/1‑149 (MQ=25)

                                                                                                                                               cTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCTTATGACTGGAATTAAACCTAATTTCg      <  1:2770894/149‑1 (MQ=33)

                                                                                                                                               cTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCTTATGACTGGAATTAAACCTAATTTCg      <  2:9641393/149‑1 (MQ=33)

                                                                                                                                                tAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCTTATGACTGGAATTAAACCTAATTTCGc     <  1:6074023/149‑1 (MQ=32)

                                                                                                                                                tAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCTTATGACTGGAATTAAACCTAATTTCGc     <  1:5502538/149‑1 (MQ=32)

                                                                                                                                                tAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCTTATGACTGGAATTAAACCTAATTTCGc     >  2:4893226/1‑149 (MQ=32)

                                                                                                                                                   gtgtAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCTTATGACTGGAATTAAACCTAATTTCGCTGa  <  2:8122438/149‑1 (MQ=11)

AGGACCACTCCCCACGATAAGATAATCATAATTTTTTGTGTTATATTTCATTATTTTTCCCTTTTCTAGCTATCTTCTGCTTCTTCTTACATTATCTGTCTTAGGTCGTCTTTTTCTCACGATAACAATAAGTAAAAGAATCACTAAGTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCTTATGACTGGAATTAAACCTAATTTCGCTGA  >  AM406671/1583782‑1584077

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.