| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 876,869 | C→G | H82D (CAT→GAT) | amtB → | ammonium transporter AmtB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 876,869 | 0 | C | G | 99.4% | 4376.3 / NA | 1094 | H82D (CAT→GAT) | amtB | ammonium transporter AmtB |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (532/549); minor base A (0/7); total (533/561) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.55e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 1095 total aligned reads displayed.
GTAAAAATGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTACATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTACTTT > AM406671/876723‑877013 | aaTGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGc > 1:7666568/1‑149 (MQ=255) aaTGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGc > 2:5887839/1‑149 (MQ=255) aTGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGcc > 1:4981203/1‑149 (MQ=255) tATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCaaa < 2:10093009/149‑1 (MQ=255) tATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCaaa > 1:3961632/1‑149 (MQ=255) aTTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCaaaa < 1:2390858/149‑1 (MQ=255) tGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGACTGGTGTAGATAT‑AGCCAAAAAt > 2:2424000/1‑149 (MQ=255) gAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAAtt < 2:8065486/149‑1 (MQ=255) gAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCAAAAAAtt < 1:11361744/149‑1 (MQ=255) tACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCat < 2:7813493/149‑1 (MQ=255) tACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCat < 1:4576932/149‑1 (MQ=255) aCAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCatt < 1:3648425/149‑1 (MQ=255) aaTGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCattat > 1:620139/1‑149 (MQ=255) atgatgatgTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCattatt > 1:5664526/1‑149 (MQ=255) gatgatgTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTc < 2:8976613/149‑1 (MQ=255) ttGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATca > 1:538459/1‑149 (MQ=255) ggCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCTAGACATTCATTCTTTCCTGAAAATcaca > 2:643709/1‑149 (MQ=255) cTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTATCATTTTCTTTTTCTGGAAATAATAGTTGGATGGAAAATTTTGACCATTTCTTTATGGATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACAtt < 1:8258426/149‑1 (MQ=255) ccAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTcc < 1:4244139/149‑1 (MQ=255) aaTGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑AGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTg < 2:8747110/149‑1 (MQ=255) aTGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCTAGACATTCATTATTTCATGCCAATAACATTCCTGa > 2:5031514/1‑149 (MQ=255) tGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGAc > 1:3000370/1‑149 (MQ=255) ggCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACg > 1:2621275/1‑149 (MQ=255) ctctGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGc < 1:10926625/149‑1 (MQ=255) tctGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCTAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGcc > 2:3404285/1‑149 (MQ=255) ctGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCt < 2:11002941/149‑1 (MQ=255) gCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑TGCTAACTAATCATTATTTCATACCAATCACATTTCTGACGGCCtttt > 2:5777246/1‑149 (MQ=255) gCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATcac < 2:3906238/132‑1 (MQ=255) gCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCtttt > 2:757387/1‑149 (MQ=255) cTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCttttt > 1:8849028/1‑149 (MQ=255) ttCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGTTAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCtttttt > 2:5434645/1‑149 (MQ=255) ccATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCt > 1:968667/1‑149 (MQ=255) ttttATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGt > 1:9908332/1‑149 (MQ=255) tttATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGtt < 1:3806132/149‑1 (MQ=255) tttATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑CGCCAATCGTTCATTATTTCATGCAAATCACATTCCTGACGGCCTTTTTTCTGGtt > 2:10833333/1‑149 (MQ=255) taagagTAATTATTAGTTTTTCATTTTCTTTTACTGGAAAAAAAAGTTGGATTAGAAATTTTGACCATTTGTTTATGAATAGTGTAGAAAT‑TGAAAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGtttt < 2:4782717/144‑1 (MQ=255) aTGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTc < 2:9721690/149‑1 (MQ=255) gggTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTACTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAg < 2:7713404/149‑1 (MQ=255) ggTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAga < 1:10020476/149‑1 (MQ=255) ggTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAga > 1:1668373/1‑149 (MQ=255) tAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAgatg < 1:4374777/149‑1 (MQ=255) tAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAgatg > 1:7955749/1‑149 (MQ=255) ttattGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGatgatg > 1:10362533/1‑149 (MQ=255) ttattGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGatgatg > 1:6554698/1‑149 (MQ=255) ttattGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGatgatg > 1:9364558/1‑149 (MQ=255) tattGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGt < 1:1324338/149‑1 (MQ=255) attGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGtt < 2:10261145/149‑1 (MQ=255) ttGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGttt < 2:2874526/149‑1 (MQ=255) ggCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTc > 2:2260643/1‑149 (MQ=255) cTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGa > 1:8429281/1‑149 (MQ=255) tttCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGatt < 1:9614112/149‑1 (MQ=255) cATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGattatt < 2:11218701/149‑1 (MQ=255) ttttctttttctGGAAATAATAGTTTGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTAc > 2:6217413/1‑149 (MQ=255) ttttctttttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTAc < 1:5267574/149‑1 (MQ=255) ttctttttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACgg > 1:10556072/1‑149 (MQ=255) ctttttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATCTCGGTGGTCGCCGTATCA‑TTACTAACAAAAACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTc > 2:8615999/1‑149 (MQ=255) ttttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGc > 1:7083926/1‑149 (MQ=255) tttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCt > 1:3211426/1‑149 (MQ=255) ttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATCT‑CGGTGGTCGCCCTATCATTCATACCAATCACATTCCTGACGGCCTTTTTCCTGGTTTTCAGATGATGTTCTCGATTATTACGGTCGCtt > 2:2066090/1‑149 (MQ=255) tGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGa > 2:2628398/1‑149 (MQ=255) tGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGa > 1:4708721/1‑149 (MQ=255) ggAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATCT‑GGCCAAACACTCATTATTTCCTGAAAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGAt > 2:6858766/1‑149 (MQ=255) gAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGGCGGACGTTGATTATTTACTGAAAATCACATTCCTGACGGCCTTTTTTGTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGAtt > 2:3200353/1‑149 (MQ=255) gAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTTTTTTTCTGATGATGTTTTCGATTATTACGTGCGCTTTGAtt > 2:6566135/1‑149 (MQ=255) gAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGACAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGAtt > 2:10589533/1‑149 (MQ=255) aaaTAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTa < 2:9197970/149‑1 (MQ=255) aaaTAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTa < 1:352958/149‑1 (MQ=255) ataataGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATCT‑GGCTAGAAACCCAATATTTACTACCAAACACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACa > 2:3658087/1‑149 (MQ=255) taataGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAg > 2:9422285/1‑149 (MQ=255) aataGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAgg < 2:7081929/149‑1 (MQ=255) ataGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGc > 1:2874423/1‑149 (MQ=255) ataGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGc > 1:6742088/1‑149 (MQ=255) taGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCt < 2:5625343/149‑1 (MQ=255) aGTTGGATTGGAAATGTTGACCATTTGTTTATGAGTGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTc < 2:5177192/149‑1 (MQ=255) ttggattggaAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCgg < 2:4090984/149‑1 (MQ=255) gattggaAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAg < 1:7528556/149‑1 (MQ=255) attggaAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTCTTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGt > 2:8527607/1‑149 (MQ=255) ttggaAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGGTGGAAGTTGTTTATTTCCTGCCAATAACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGtt > 2:4574273/1‑149 (MQ=255) tggaAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAGAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTg > 2:5989435/1‑149 (MQ=255) tggaAATTTTGACCATTTGTATATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACAGCCGTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTg < 2:1883216/149‑1 (MQ=255) gaAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTggg < 1:11148173/149‑1 (MQ=255) aTTTTGACAATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGggagg < 1:8086206/149‑1 (MQ=255) ttttGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTTGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGggagga < 1:6883808/149‑1 (MQ=255) ttttGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGggagga < 1:2239829/149‑1 (MQ=255) ttGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATg < 1:4096512/149‑1 (MQ=255) ttGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATg < 1:1952703/149‑1 (MQ=255) ttGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTATCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATg < 1:5854549/149‑1 (MQ=255) cATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGAtt < 1:10163863/149‑1 (MQ=255) cATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTGTTTCTGGTTTTCAGATGGTGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATAAGAtt > 1:7252618/1‑149 (MQ=255) aTTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGAttt > 2:4293223/1‑149 (MQ=255) tttGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTATATGGGAGGTTGAGAtttc > 1:3399981/1‑148 (MQ=255) ttGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTAc > 1:8688348/1‑149 (MQ=255) tttATGAATGATGTATTTAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATGCCTGACGGCCTTTTTTCTGATTTCCAGATGATGTTTTCGATGATTACGGTCCATTTCATTACAGTCTCGGTAGTTGGGAGGATGAGATTTAccgc < 2:1645830/149‑4 (MQ=255) aTGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTAt < 2:7943351/149‑1 (MQ=255) gAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTc < 2:7413291/149‑1 (MQ=255) gAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTc < 1:8991583/149‑1 (MQ=255) aTGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATtata < 2:1246572/149‑1 (MQ=255) tGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTNGGGAGGATGAGATTTACTCCTATTCTAc < 1:6324197/149‑1 (MQ=255) gtgtAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTACtt < 2:8324272/149‑1 (MQ=255) tgtAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTACttt < 1:9196966/149‑1 (MQ=255) | GTAAAAATGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTACATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTACTTT > AM406671/876723‑877013 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |