| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 1,532,424 | G→C | P159R (CCC→CGC) | llmg_1560 ← | stress induced DNA binding protein (putative) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 1,532,424 | 0 | G | C | 99.7% | 4447.7 / NA | 1092 | P159R (CCC→CGC) | llmg_1560 | stress induced DNA binding protein (putative) |
| Reads supporting (aligned to +/- strand): ref base G (2/0); major base C (489/598); minor base T (1/2); total (492/600) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 1093 total aligned reads displayed.
TGAGCAAGCTCGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGGGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGTTTTCTATCAATGCTTC > AM406671/1532276‑1532569 | tGAGCAAGCTCGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCCAGTTCTCCTGCAAAATAgg > 2:7550897/1‑149 (MQ=255) aGCAAGCTCGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGa > 2:3325602/1‑149 (MQ=255) aaGCTCGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGaata < 1:1536181/149‑1 (MQ=255) aGCTCGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGaataa > 2:1817000/1‑149 (MQ=255) gCTCGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGaataat < 2:10397081/149‑1 (MQ=255) cTCGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAataata > 1:764391/1‑149 (MQ=255) cGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGa > 1:4805719/1‑149 (MQ=255) cGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGa < 2:869251/149‑1 (MQ=255) gTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGAc < 1:5456299/149‑1 (MQ=255) gTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGAc < 1:7297373/149‑1 (MQ=255) tCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCAGCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACa > 1:6849842/1‑149 (MQ=255) cTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACaa < 1:10153618/149‑1 (MQ=255) ggACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAAt < 1:6221100/149‑1 (MQ=255) gACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACACTGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAAtt > 2:7724350/1‑149 (MQ=255) gACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAAtt > 1:1034047/1‑149 (MQ=255) tCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATtata > 1:3151781/1‑149 (MQ=255) tCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATtata < 1:10013557/149‑1 (MQ=255) cAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAg > 1:4270281/1‑149 (MQ=255) aaGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGc > 2:6590043/1‑149 (MQ=255) cAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTa > 2:4779648/1‑149 (MQ=255) aaaaaaGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAg < 1:1309081/149‑1 (MQ=255) aaaaaaGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATACGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAg < 2:2560382/149‑1 (MQ=255) aaaaaGTGGGACTAGCTGGCTACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGc < 2:5554996/149‑1 (MQ=255) aaaaaGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGc < 1:8815785/149‑1 (MQ=255) aaaGTGGGACTAGCTGGATACAATGGTGGTGACTTAAATGTTCATCAAAATCTTTAATATTCATCTCCCTCCTCAATACATGCGCCTATCGTTTTTCCATGTTCTCCTGCAAAATAGCGGATAATAGACAAATTATAGCTGTAAAGCtt < 2:5359134/149‑1 (MQ=255) aaaGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCtt < 2:6829935/149‑1 (MQ=255) aaaGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCtt < 2:9836096/149‑1 (MQ=255) aGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGc > 1:1439335/1‑149 (MQ=255) gggACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGaa > 2:4961331/1‑149 (MQ=255) ggACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAAt > 2:1976943/1‑149 (MQ=255) ggACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAAGCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAAt < 2:924718/149‑1 (MQ=255) aCTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTg < 1:1128220/149‑1 (MQ=255) cTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGc < 2:9408473/149‑1 (MQ=255) gATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCt < 1:7506698/149‑1 (MQ=255) tggtggTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTaa > 2:3878809/1‑149 (MQ=255) ggtCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCGCAATAAAATCGCCTATCGATTTTCCAAGTACTCCTGCAAAAGCGCGAATAATAGAGAAAATACAGCCGTAAAGCTTGCGAATTCCAAGTTCTAAGCTAAAtat > 2:8235577/1‑147 (MQ=255) gtCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTACTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAAtttt < 2:3675865/149‑1 (MQ=255) cACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTttc < 2:157195/149‑1 (MQ=255) cACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTttc < 1:9477603/149‑1 (MQ=255) ttAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTttcttc < 1:6449871/149‑1 (MQ=255) ttAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTttcttc > 1:2141843/1‑149 (MQ=255) tAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTcc < 1:11102916/149‑1 (MQ=255) aaaTGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCt < 1:1142681/149‑1 (MQ=255) aaaTGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCt < 1:4030842/149‑1 (MQ=255) aaaTGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCt > 1:9718778/1‑149 (MQ=255) cTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCATGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTgc > 2:10601869/1‑149 (MQ=255) tcatcaAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTgcg > 1:1061249/1‑149 (MQ=255) catcaAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTgcgc > 1:9030277/1‑149 (MQ=255) tcaAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTa > 2:6275070/1‑149 (MQ=255) tcaAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTa < 1:9908970/149‑1 (MQ=255) caAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTTTTTTTTTTTCTACAAGATAGCGATTAATAGATAAATTATTTTTGTAAAGCTTTTGATTTGCTAGTTCTATGCTAAATTTTTCTTCCTTTTTTGCTat > 2:6111574/1‑148 (MQ=255) caAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAg > 2:5127146/1‑149 (MQ=255) aaTCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGttt < 1:2340989/149‑1 (MQ=255) aaTCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGttt > 1:8035249/1‑149 (MQ=255) cTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAAt < 1:7059956/149‑1 (MQ=255) tttAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATc > 2:10138483/1‑149 (MQ=255) tttAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATc > 2:11116424/1‑149 (MQ=255) tAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGtt < 1:4597457/109‑1 (MQ=255) tAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGtt > 2:4597457/1‑109 (MQ=255) aaTCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCt > 1:10887300/1‑149 (MQ=255) atcttcatcttcCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTc < 1:2864044/149‑1 (MQ=255) catcttcCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCg < 1:1794201/149‑1 (MQ=255) ttcCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATATCCGTAAAGCTTGCGAATTGCCAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGataa < 2:5756133/149‑1 (MQ=255) tcctccTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGataaa < 1:442479/149‑1 (MQ=255) tcctccTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGataaa > 1:3579250/1‑149 (MQ=255) tcctccTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGATCTAAGATAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTAGTCCGataaa > 1:6030000/1‑149 (MQ=255) ctcctcAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGataaata > 2:1320423/1‑149 (MQ=255) tcctcAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGataaataa > 2:8138633/1‑149 (MQ=255) cctcAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGAtaaataaa > 2:8483892/1‑149 (MQ=255) aTAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTg < 1:3353886/149‑1 (MQ=255) tAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTgg > 2:7301964/1‑149 (MQ=255) aaaTTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTTGt > 1:8547787/1‑149 (MQ=255) aaTTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTATGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGtt < 1:6721569/149‑1 (MQ=255) tCGCCTATCGTTTTTCCAAGTTCTCCTGCTAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTg > 2:7052063/1‑149 (MQ=255) ccTATCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGaaa < 1:5129920/149‑1 (MQ=255) aTCGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATc > 2:310131/1‑149 (MQ=255) aTCATTTTTCCAAGTTCTCCTGCAAAATAACGAATAATAAACAAATTATAGCCGTAAAGCTTACGAAATGCAAGTTCTAAACTAAATATTTATTCCTTTTACGCTAGTTAAATCTCACATCAAATAAATAAATTTTGGTTCTGAAAAta > 2:4217524/1‑148 (MQ=255) cGTTTTTCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCAt < 2:1170904/149‑1 (MQ=255) ttttCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAAGTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTATGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGa < 1:3827242/149‑1 (MQ=255) tttCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGAt > 1:5821128/1‑149 (MQ=255) tttCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAAGTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGAt < 1:8204162/149‑1 (MQ=255) ttCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATa > 1:9314991/1‑149 (MQ=255) ttCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATa < 2:5940845/149‑1 (MQ=255) tCCAAGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATaa > 1:5643107/1‑149 (MQ=255) aaGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTTTTTTTTTTTCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGt > 2:10814948/1‑149 (MQ=255) aGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGtt > 2:9591047/1‑149 (MQ=255) aGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGtt > 1:7882518/1‑149 (MQ=255) aGTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGtt < 2:8920337/149‑1 (MQ=255) gTTCTCCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGttt < 1:371118/149‑1 (MQ=255) tctcCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGTTTTc < 1:2698576/149‑1 (MQ=255) ttcCTTCAAATTAGTGATTAATAGACATATTTTAGTTGTATAGTTTGCGAATTGTATTTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCTGATAAATATATTTTGGTTCTGAAAATCATTGATAAAGTTTTCt < 2:2851085/148‑1 (MQ=255) tcCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGTTTTCTa > 1:2506418/1‑149 (MQ=255) tcCTGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTATTCTACCTTTTGTGCCAGGTTAATCGCGCGTCCGATAAATAAATTTTGTTTATTAAAATCATTGATAAAGTTTTCTa > 2:2407367/1‑149 (MQ=255) tGCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGTTTTCTATCa < 2:2251144/149‑1 (MQ=255) gCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGTTTTCTATCaa < 2:10728522/149‑1 (MQ=255) gCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGTTTTCTATCaa < 2:11011048/149‑1 (MQ=255) gCAAAATAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGTTTTCTATCaa < 2:7841185/149‑1 (MQ=255) aTAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGTTTTCTATCAATGCtt > 2:4338913/1‑149 (MQ=255) tAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGtt < 1:4972955/134‑1 (MQ=255) tAGCGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGTTTTCTATCAATGCTTc > 1:10715078/1‑149 (MQ=255) | TGAGCAAGCTCGTCTGGACTCAAGTCAGAAAAAAGTGGGACTAGCTGGATACAATGGTGGTCACTTAAATGCTCATCAAAATCTTTAATCTTCATCTTCCTCCTCAATAAATTCGCCTATCGTTTTTCCAAGTTCTCCTGCAAAATAGGGAATAATAGACAAATTATAGCCGTAAAGCTTGCGAATTGCAAGTTCTAAGCTAAATTTTTCTTCCTTTTGCGCTAGTTTAATCGCTCGTCCGATAAATAAATTTTGGTTCTGAAAATCATTGATAAAGTTTTCTATCAATGCTTC > AM406671/1532276‑1532569 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |