| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 2,122,558 | C→T | A57T (GCC→ACC) | cfa ← | cyclopropane‑fatty‑acyl‑phospholipid synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 2,122,558 | 0 | C | T | 99.9% | 5321.6 / NA | 1353 | A57T (GCC→ACC) | cfa | cyclopropane‑fatty‑acyl‑phospholipid synthase |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (650/701); total (652/701) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 1353 total aligned reads displayed.
TCCCAAAAGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCGAGGCTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTGCTTTGTTC > AM406671/2122412‑2122703 | ccAAAAGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGc > 1:8156033/1‑149 (MQ=255) ccAAAAGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGc < 2:3632617/149‑1 (MQ=255) aaaaGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAATCCTCAGCTAATACCAAGGTTGGCAt < 2:6202587/149‑1 (MQ=255) aaaaGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCAt < 1:6982981/149‑1 (MQ=255) aaGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATtg > 1:753636/1‑149 (MQ=255) aaGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATtg > 2:2656938/1‑149 (MQ=255) aGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATtga > 2:3882478/1‑149 (MQ=255) aGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATtga > 1:4154679/1‑149 (MQ=255) gTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATtgat > 1:10810031/1‑149 (MQ=255) tttGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATtgatg < 1:9454236/149‑1 (MQ=255) ttGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATtgatga < 1:2177491/149‑1 (MQ=255) tGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTgatgat < 1:7147785/149‑1 (MQ=255) tGAACATTAATTTACCAAAGCCAGTTTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCCTTgatgat < 2:6494636/149‑1 (MQ=255) gAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATa < 2:5720632/149‑1 (MQ=255) aGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATaa < 2:5927937/149‑1 (MQ=255) gCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATaaa < 2:3288990/149‑1 (MQ=255) gCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATaaa < 1:9577683/149‑1 (MQ=255) aTTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATc > 1:9705385/1‑149 (MQ=255) ttAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTACGCTGATGCAACAAGCTCTGGGATACTCCCTTCACTCTGACTTTCTTCATTCATATAAGCCTCAGCTAATACCCAGGTTGGCGTTGATGATAAATCg > 2:1568054/1‑149 (MQ=255) ttAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCg < 2:11263400/149‑1 (MQ=255) tAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGc > 1:171153/1‑149 (MQ=255) aTTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTa < 1:7384581/149‑1 (MQ=255) aCCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATg > 1:4361102/1‑149 (MQ=255) aGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAAt > 1:8777466/1‑149 (MQ=255) aGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAAt < 1:2990138/149‑1 (MQ=255) aGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAAt < 1:7939745/149‑1 (MQ=255) aGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAAt > 1:11103483/1‑149 (MQ=255) cAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAAtttt > 2:81003/1‑149 (MQ=255) gATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAAtttttt > 1:10265061/1‑149 (MQ=255) aTTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTa < 2:9385788/149‑1 (MQ=255) tGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTAtt > 1:8406728/1‑149 (MQ=255) ggTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTg < 1:240196/149‑1 (MQ=255) gTCAGTTAAAACACTGTCCGCTTTACGGTAAGCTGATGCAACAATCTCTTGAATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCGCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGa < 2:2827055/149‑1 (MQ=255) cAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGaaa < 1:9190810/149‑1 (MQ=255) aGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATACATCGCTAAATGAGAATTTTTTATTGAAAg > 2:10762899/1‑149 (MQ=255) aGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAg > 2:2344912/1‑149 (MQ=255) gTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGt < 1:5464701/149‑1 (MQ=255) aaCTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGa < 1:623226/149‑1 (MQ=255) cTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAAc > 1:4607630/1‑149 (MQ=255) cTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAAc > 2:7869958/1‑149 (MQ=255) cTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAAc > 1:5049994/1‑149 (MQ=255) gTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAGATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCt < 2:7733833/149‑1 (MQ=255) tCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTg < 2:3110829/149‑1 (MQ=255) aCGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTtctc > 2:9136021/1‑149 (MQ=255) cGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTcc < 1:901078/149‑1 (MQ=255) gTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCtt < 2:2526149/149‑1 (MQ=255) tAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTc < 1:1946335/149‑1 (MQ=255) aGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCAc < 2:8468309/149‑1 (MQ=255) aGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCAc > 2:6888516/1‑149 (MQ=255) tGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACt > 1:11297347/1‑149 (MQ=255) caacaaGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACttt > 1:3169250/1‑149 (MQ=255) acaaGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTc < 2:5269396/149‑1 (MQ=255) caaGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCt > 1:6021152/1‑149 (MQ=255) aGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGt > 1:8592235/1‑149 (MQ=255) aGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGt < 1:5258683/149‑1 (MQ=255) gCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGtt < 1:9924132/149‑1 (MQ=255) ctctTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGttt > 1:3809977/1‑149 (MQ=255) ctctTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGttt < 2:4661718/149‑1 (MQ=255) ctctTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGttt > 2:10869309/1‑149 (MQ=255) ttGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTc > 1:10529655/1‑149 (MQ=255) tGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTcc > 1:334183/1‑149 (MQ=255) ggATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCa < 2:4905923/149‑1 (MQ=255) ggATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCa < 1:3466912/149‑1 (MQ=255) gATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCAt < 1:5847292/149‑1 (MQ=255) agaCTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTTAGGTAATACCAAGGTTGGCACTGATGATAAATTGCTAAATGAGAATTTTTTATTGAAAGTGACGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATc < 2:8262462/147‑1 (MQ=255) aTACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATc > 2:7343704/1‑149 (MQ=255) aTACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATc > 1:1590405/1‑149 (MQ=255) aTACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCATCAGCTCATACCAACGTTGGCATTGATGATAAATCGCTAAATGAGACTATTTTATTGAAAGTTATGTGAACTTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCTTc > 2:894027/1‑149 (MQ=255) cTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCa < 1:2840962/149‑1 (MQ=255) tCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCaa < 1:651531/149‑1 (MQ=255) cccTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAAt > 2:2070895/1‑149 (MQ=255) cccTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAAt > 1:9337891/1‑149 (MQ=255) ccTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATa > 1:2697187/1‑149 (MQ=255) cTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATaa > 2:10360183/1‑149 (MQ=255) tctcAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACt > 2:7512504/1‑149 (MQ=255) tcAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGc > 1:4463753/1‑149 (MQ=255) cAATTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCa > 1:7758886/1‑149 (MQ=255) aaTTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCaa < 2:9851152/149‑1 (MQ=255) aTTTCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAAt < 1:4853557/149‑1 (MQ=255) tttCTTCATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATg > 2:4354006/1‑149 (MQ=255) ttcttcATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATgg > 1:1443594/1‑149 (MQ=255) ttcttcATTCATATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATgg < 2:1316851/149‑1 (MQ=255) cttcATTCATATAAGCCTCAGCTAATATCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCATTgggg > 2:8779634/1‑149 (MQ=255) ttcattcaTATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGa < 2:6669824/149‑1 (MQ=255) ttcattcaTATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGa > 2:10164845/1‑149 (MQ=255) tcattcatATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGat < 1:3615250/149‑1 (MQ=255) cattcatATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGata < 2:4510521/149‑1 (MQ=255) tcatATAAGCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCg > 2:11050330/1‑149 (MQ=255) gCCTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAAc < 2:4064219/149‑1 (MQ=255) cTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCATCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTg < 1:6703532/149‑1 (MQ=255) cTCAGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTg > 1:5603265/1‑149 (MQ=255) aGCTAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTGCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCaa < 1:4011352/149‑1 (MQ=255) tAATACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTg < 2:10574875/149‑1 (MQ=255) aaTACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTGc < 2:7103610/149‑1 (MQ=255) aTACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTGCt > 2:3437706/1‑149 (MQ=255) aTACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTGCt < 1:118032/149‑1 (MQ=255) aTACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTGCt < 2:9602057/149‑1 (MQ=255) tACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTGCtt > 1:10018344/1‑149 (MQ=255) tACCAAGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTGATTGAAAGTGATGTGATCTTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCATTAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTGCtt < 2:1811822/149‑1 (MQ=255) caaGGTTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTGCTTTGt < 2:548033/147‑1 (MQ=255) | TCCCAAAAGTTTGAGCATTAATTTACCAAAGCCAGATTGGTCAGTTAAAAAACTGTCCGCTTTACGGTAAGCTGATGCAACAAGCTCTTGGATACTCCCTTCAATCTCAATTTCTTCATTCATATAAGCCTCAGCTAATACCGAGGCTGGCATTGATGATAAATCGCTAAATGAGAATTTTTTATTGAAAGTGATGTGAACCTGAGTTTCTCCTTCACCATACTTTTCTGTTTTTCCATCCCAATAAGTCACTGCAATGGGGATATCGAAAGCAACTGCAAGTGCTTTGTTC > AM406671/2122412‑2122703 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |