| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 2,492,912 | G→A | A203V (GCA→GTA) | gapB ← | glyceraldehyde 3‑phosphate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 2,492,912 | 0 | G | A | 99.8% | 6168.6 / NA | 1570 | A203V (GCA→GTA) | gapB | glyceraldehyde 3‑phosphate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (0/1); major base A (791/774); minor base C (3/0); total (794/776) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 1618 total aligned reads displayed.
TATCAAGGATAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTGCAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGCAAGACAGTT > AM406671/2492766‑2493057 | aTCAAGGATAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTacag < 2:4638214/149‑1 (MQ=255) cAAGGATAGTAACAAGTTCAGTCAAAGAACCAGTTGGAACTGGTACACGATGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATCGCATTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTacagca > 2:6237638/1‑149 (MQ=255) aaGGATAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCAc > 2:6067727/1‑149 (MQ=255) aaGGATAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCAc > 2:5249825/1‑149 (MQ=255) aGGATAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACg < 1:9131492/149‑1 (MQ=255) ggATAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGt < 2:1295404/149‑1 (MQ=255) ggATAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGt < 1:3606706/149‑1 (MQ=255) gATAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTg > 2:553122/1‑149 (MQ=255) tAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTgcg > 1:9317209/1‑149 (MQ=255) gTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGcgcg < 2:4275981/149‑1 (MQ=255) gTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGcgcg < 2:762336/149‑1 (MQ=255) aCAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACg > 1:2664284/1‑149 (MQ=255) aGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGaa > 1:8085831/1‑149 (MQ=255) gTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGaaa > 2:5662558/1‑149 (MQ=255) gTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTGGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGaaa > 1:5435195/1‑149 (MQ=255) ttCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAAt > 1:2330601/1‑149 (MQ=255) ttCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAAt > 2:4877552/1‑149 (MQ=255) tCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTcca > 2:652566/1‑149 (MQ=255) tCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTcca < 2:9213303/149‑1 (MQ=255) cAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTccac > 1:2157164/1‑149 (MQ=255) cAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTccac > 2:10880787/1‑149 (MQ=255) cAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTccac > 2:8988008/1‑149 (MQ=255) tGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCcaccac < 2:2536884/149‑1 (MQ=255) tGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCcaccac > 2:9741468/1‑149 (MQ=255) aaCCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACgg < 2:8796/149‑1 (MQ=255) aGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGtgtg > 2:3236667/1‑149 (MQ=255) ttGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTggg < 2:1987180/149‑1 (MQ=255) ttGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTggg < 1:10379819/149‑1 (MQ=255) tGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGc > 2:9453615/1‑149 (MQ=255) aaCTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCAt > 1:3806921/1‑149 (MQ=255) ggTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAag > 1:3230248/1‑149 (MQ=255) cacGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTc < 2:11104184/149‑1 (MQ=255) acGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCa < 1:7074286/149‑1 (MQ=255) gTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCAtt < 2:6368467/149‑1 (MQ=255) ttGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCAttt > 1:2059633/1‑149 (MQ=255) ttGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCAttt < 1:11056141/149‑1 (MQ=255) tGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGGTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTg < 2:7088277/149‑1 (MQ=255) cATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCa > 2:10422372/1‑149 (MQ=255) cATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCa > 2:2747479/1‑149 (MQ=255) tGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCAcc > 1:4848612/1‑149 (MQ=255) gTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCa < 1:5027042/149‑1 (MQ=255) ccTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAgt < 1:3412841/149‑1 (MQ=255) ttGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCGTTTGGCCACCAgtgt > 2:2272261/1‑149 (MQ=255) ttGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAgtgt > 1:4610742/1‑149 (MQ=255) aaGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAAc > 1:1577988/1‑149 (MQ=255) aGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAAcc > 2:4067342/1‑149 (MQ=255) aGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAAcc < 1:10858783/149‑1 (MQ=255) gTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCg < 1:10247028/149‑1 (MQ=255) aCCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGaa > 1:5175192/1‑149 (MQ=255) aCCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGaa < 1:7817654/149‑1 (MQ=255) ccTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAAc < 1:4029711/149‑1 (MQ=255) ccTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAAc < 1:1838193/149‑1 (MQ=255) tGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGt < 1:6512192/149‑1 (MQ=255) aaGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAg > 2:7782048/1‑149 (MQ=255) gTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTc < 2:3646012/149‑1 (MQ=255) cTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCAtt < 1:2547465/149‑1 (MQ=255) ggCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGt < 2:8180494/149‑1 (MQ=255) gCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTa < 1:825417/149‑1 (MQ=255) cAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTAc > 1:9733356/1‑149 (MQ=255) cAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTAc > 2:5049959/1‑149 (MQ=255) aaTACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTAcc < 1:9516235/149‑1 (MQ=255) tACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCaa > 2:9621794/1‑149 (MQ=255) aCAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAAc > 1:304159/1‑149 (MQ=255) caggACGGATGGCGTTAGCAGCGCGTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATGTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACt < 2:10649929/146‑1 (MQ=37) cAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACt > 1:427519/1‑149 (MQ=255) aaGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCAGCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACtt < 1:5898666/149‑1 (MQ=255) aaGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACtt > 2:1773380/1‑149 (MQ=255) aaGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACtt < 2:3791347/149‑1 (MQ=255) aCCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGa < 1:11277814/149‑1 (MQ=255) gATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATAc < 1:1057599/149‑1 (MQ=255) tGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCg > 1:8542574/1‑149 (MQ=255) gCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGaa > 2:5922577/1‑149 (MQ=255) gCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGaa < 2:11187866/149‑1 (MQ=255) tAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAAttgt > 1:6117427/1‑149 (MQ=255) tAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAAttgt > 1:8729722/1‑149 (MQ=255) tAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAAttgt < 2:9323101/149‑1 (MQ=255) agcagcACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCGTTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAAttgtt < 1:6732493/149‑1 (MQ=255) gcaCCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATtgtttgtt < 1:841166/149‑1 (MQ=255) caCCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTc > 2:11358356/1‑149 (MQ=255) caCCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTc < 2:8367297/149‑1 (MQ=255) gTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGt < 2:1533170/149‑1 (MQ=255) gTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGACACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGt > 2:6848847/1‑149 (MQ=255) tGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTAt < 2:3012828/149‑1 (MQ=255) tGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTAt < 1:2837890/149‑1 (MQ=255) ttAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGc > 1:9873712/1‑149 (MQ=255) ttAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGc > 2:8509672/1‑149 (MQ=255) ttAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGc < 2:7266156/149‑1 (MQ=255) ttAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGc < 1:4463148/149‑1 (MQ=255) aGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTTATACCGAATTGTTTGTTCAAAGTATCAGCCa < 1:7261524/149‑1 (MQ=255) ggTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCAt < 2:7423319/149‑1 (MQ=255) gTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCAtt < 2:10205842/149‑1 (MQ=255) tACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTg < 2:3400431/149‑1 (MQ=255) tACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTg < 1:10013088/149‑1 (MQ=255) aTGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGc < 2:7998616/149‑1 (MQ=255) tGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGCa < 1:7617138/149‑1 (MQ=255) gTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGCaa > 1:1312816/1‑149 (MQ=255) ttttCAGCTACATCACGTCCGCGACGGAAATGGCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCAGTGTACCACCTTTGCTACCGAATTGTTTGTTCAAAGTATCAGCCCTTGCAGCAAg < 2:4476609/149‑1 (MQ=25) tCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGCAAGACa < 1:5668228/149‑1 (MQ=255) cAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGCAAGACAg < 1:8925513/149‑1 (MQ=255) cAGCTACAGCACGTGCGCGACGGAAATCNCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGCAAGACAg > 1:6325820/1‑149 (MQ=255) | TATCAAGGATAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTGCAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGCAAGACAGTT > AM406671/2492766‑2493057 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |