| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 2,183,058 | (A)5→4 | coding (399/1161 nt) | llmg_2218 ← | predicted transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 2,183,054 | 0 | A | . | 99.5% | 5207.2 / 15.3 | 1106 | coding (403/1161 nt) | llmg_2218 | predicted transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (3/3); new base . (617/481); total (622/484) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 1199 total aligned reads displayed.
TTAACTTTTATTTCTTGATTATTCGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAGAAAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGAATAAAAAAATCATCACGATAGCCTTGCTG > AM406671/2182906‑2183198 | ttAACTTTTATTTCTTGATTATTCGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAGa > 2:5865924/1‑149 (MQ=255)ttAACTTTTATTTCTTGATTATTCGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAGa > 2:7542231/1‑149 (MQ=255) aaCTTTTATTTCTTGATTATTCGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAGaaa < 1:7883026/149‑1 (MQ=255) aCTTTTATTTCTTGATTATTCGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAGaaaa > 2:2112663/1‑149 (MQ=255) ttttATTTCTTGATTATTCGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAGaaaatc < 2:2866604/149‑3 (MQ=255) ttttATTTCTTGATTATTCGAATATTTGTGTGCTTCATTTTGAATCATTTCTGCCTCCGCAAACTCTTCTCTTAACTGTATCATATCCATCCAGTTGATATAATGAAAAAAATAATCATTCTTACTTCCATTGATAATATAAGacaatc > 2:820659/1‑147 (MQ=255) tttATTTCTTGATTATTCGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAGaaaatcc < 1:8092566/149‑4 (MQ=255) ttATTTCTTGATTATTCGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAGaaaatcct < 2:8481550/149‑5 (MQ=255) tATTTCTTGATTATTCGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTg < 1:3718823/149‑1 (MQ=255) aTTTCTTGATTATTCGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGt < 2:7397477/149‑1 (MQ=255) tttCTTGATTATTCGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGtt > 2:3897048/1‑149 (MQ=255) ttCTTGATTATTCGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTc < 1:9163944/149‑1 (MQ=255) tCTTGATTATTCGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTcc < 2:275180/149‑1 (MQ=255) cTTGATTATTCGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCg > 2:5423717/1‑149 (MQ=255) ttGATTATTCGCATATTTGTGTGCTTCACTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCgg < 1:6312371/149‑1 (MQ=255) tGATTATTCGCATATTTGTGTGCTTCATTTTGAATCATTTCTACTTCCGCAAACTCTTCTCATAACTGTATTATATTCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGAAAATATAAG‑AAAATCCTGTccctaa > 2:3227854/1‑146 (MQ=255) ttattCGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAAtg > 2:3689191/1‑149 (MQ=255) ttattCGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAAtg > 1:8745335/1‑149 (MQ=255) ttattCGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAAtg > 1:7184556/1‑149 (MQ=255) tattCGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTACCATTGATAATATAAG‑AAAATCCTGTTCCGGAAtgt < 2:6167973/149‑1 (MQ=255) tCGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCa < 2:4681945/149‑1 (MQ=255) cGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCAt < 1:2996589/149‑1 (MQ=255) cGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCAt < 2:6049643/149‑1 (MQ=255) cATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGa > 2:1452975/1‑149 (MQ=255) cATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGa > 1:1762563/1‑149 (MQ=255) tttGTGTGCTTCATTTTTAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTcc < 2:56583/149‑1 (MQ=255) gtgtgCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCCGTTCCGGAATGTGCATCAGTCCAAg > 2:8819409/1‑149 (MQ=255) gtgCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCa > 1:1183679/1‑149 (MQ=255) gtgCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCa > 1:2134770/1‑149 (MQ=255) tgCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCAt > 1:7755530/1‑149 (MQ=255) cTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTg > 2:63350/1‑149 (MQ=255) tCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCa > 1:8214604/1‑149 (MQ=255) cATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCat > 2:4519443/1‑149 (MQ=255) aTTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCatc > 1:4431842/1‑149 (MQ=255) ttGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCatcaat < 1:3543533/149‑1 (MQ=255) tGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCatcaatc > 2:8007267/1‑149 (MQ=255) tGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCatcaatc > 1:1352026/1‑149 (MQ=255) cATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCAcatc > 1:6806666/1‑149 (MQ=255) cATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCAcatc > 1:5266563/1‑149 (MQ=255) aTTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCAcatca > 2:5315504/1‑149 (MQ=255) tGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTNCAAGCATTGCATCAATCACATCATAAgg < 1:5069009/149‑1 (MQ=255) cTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTa > 2:2562195/1‑149 (MQ=255) ttCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAg > 1:4129035/1‑149 (MQ=255) tCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGc < 2:9057171/149‑1 (MQ=255) ccGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCa < 2:7214805/149‑1 (MQ=255) ctcttctcttAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAAtttt > 1:6436500/1‑149 (MQ=255) tcttctcttAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAAttttt > 2:1930906/1‑149 (MQ=255) ttctcttAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTcc < 2:7656451/149‑1 (MQ=255) tAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTc > 1:7014199/1‑149 (MQ=255) tAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTc > 2:7867874/1‑149 (MQ=255) acccgTAGCATATCCCACCAGTTGATATAATGAACAAAATAATCATCCTTACCTCCATTGATAATATAA‑AAAAATCCTGTTCCGGAATGTGCATGAGGCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCa < 2:1706897/145‑1 (MQ=255) aCTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATTCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCaa < 1:5801913/149‑1 (MQ=255) aCTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCaa > 2:4367808/1‑149 (MQ=255) tGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAAt > 2:5064488/1‑149 (MQ=255) tGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAAt < 2:229572/149‑1 (MQ=255) gTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACt > 2:2406163/1‑141 (MQ=255) tATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGCAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAg < 1:4720202/149‑1 (MQ=255) aTCATATCCGACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGc < 1:2334148/149‑1 (MQ=255) aTCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGc > 1:1576473/1‑149 (MQ=255) tCATATCCAACCAGTTGATATAATGAACCAAATAATCATTCTTCCTTCCATTGATAATGTAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCt < 1:6631102/149‑1 (MQ=255) tCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATCAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCt > 1:5411327/1‑149 (MQ=255) atCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCaa > 1:2652942/1‑149 (MQ=255) tCCAATCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCaaa < 1:48939/149‑1 (MQ=255) ccAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAAc > 1:8364595/1‑149 (MQ=255) ttGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGa < 1:8499826/149‑1 (MQ=255) atatAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGAttt > 2:6935125/1‑149 (MQ=255) tataATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTa > 1:8902495/1‑149 (MQ=255) tataATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTa < 1:8638422/149‑1 (MQ=255) ataATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACCTCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCATCAAACGAACAGGATTTAc > 2:3095041/1‑149 (MQ=255) taATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACt > 1:3374026/1‑149 (MQ=255) taATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACt > 2:867812/1‑149 (MQ=255) taATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATAATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTCCAAACGAACAGGATTTAcc > 2:1265188/1‑148 (MQ=255) aaTGAACAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTc > 1:225752/1‑149 (MQ=255) aCAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACt < 2:3587852/149‑1 (MQ=255) aCAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACt < 1:7562173/149‑1 (MQ=255) cAAAATAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTg > 1:3185296/1‑149 (MQ=255) aaaTAATCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGa > 1:4608185/1‑149 (MQ=255) aataatCATCCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGaa > 1:2507011/1‑149 (MQ=255) aataatCATCATTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGaa > 2:4146254/1‑149 (MQ=255) tcatcCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGAATaaaa > 1:5994342/1‑149 (MQ=255) tcatcCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGAAATaaaa > 2:8300564/1‑149 (MQ=255) tcCTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGAATaaaaaaa < 1:1930290/149‑1 (MQ=255) ccTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGAATAAAAAAat > 2:918886/1‑149 (MQ=255) cTTACTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCTTAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGAATAAAAAAatc < 1:5589254/149‑1 (MQ=255) cTTACTTCCATTGATAATATAAG‑AAAAGCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGAATAAAAAAatc < 2:101180/149‑1 (MQ=255) aCTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGAATAAAAAAatcatc > 1:3902757/1‑149 (MQ=255) cTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGAATAAAAAAAtcatca < 1:6142422/149‑1 (MQ=255) cTTCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGAATAAAAAAAtcatca > 2:7706143/1‑149 (MQ=255) ttCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAAAAGGATTTACTCCAACTGGAATAAAAAAATCATCAc > 2:4905526/1‑149 (MQ=255) tCCATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGAATAAAAAAATCATCACg > 1:4292375/1‑149 (MQ=255) ccATTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGAATAAAAAAATCATCACGa > 1:1028244/1‑149 (MQ=255) aTTGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGAATAAAAAAATCATCACGATa > 1:2821729/1‑149 (MQ=255) tGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGAATAAAAAAATCATCACGATAGc > 1:9064727/1‑149 (MQ=255) tGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGAATAAAAAAATCATCACGATAGc < 2:4242457/149‑1 (MQ=255) tGATAATATAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTACAAGCATTGCATACATCACCTCATCAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGACTAAAAAAATCATCACGATAGc > 2:1808151/1‑149 (MQ=255) aaaataTAAG‑AAAATGCTGTTCCGGAATTTGCATTAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGAATAAAAAAATCATCACGATAGccc > 2:665869/3‑148 (MQ=255) taataTAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGAATAAAAAAATCATCACGATAGCCtt > 2:7095803/1‑149 (MQ=255) aataTAAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGAATAAAAAAATCATCACGATAGCCTTg > 2:3331832/1‑149 (MQ=255) ataAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGAATAAAAAAATCATCACGATAGCCTTGCTg > 1:73979/1‑149 (MQ=255) ataAG‑AAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGAATAAAAAAATCATCACGATAGCCTTGCTg > 2:6533269/1‑149 (MQ=255) | TTAACTTTTATTTCTTGATTATTCGCATATTTGTGTGCTTCATTTTGAATCATTTCTGCTTCCGCAAACTCTTCTCTTAACTGTATCATATCCAACCAGTTGATATAATGAACAAAATAATCATCCTTACTTCCATTGATAATATAAGAAAAATCCTGTTCCGGAATGTGCATGAGTCCAAGCATTGCATCAATCACATCATAAGGTAGCAAAATTTTTCCACTTTCAAATAGCTTCAAACGAACAGGATTTACTCCAACTGGAATAAAAAAATCATCACGATAGCCTTGCTG > AM406671/2182906‑2183198 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |