| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 732,731 | +C | coding (210/975 nt) | malR → | putative maltose operon transcriptional repressor, LacI family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 732,730 | 1 | . | C | 99.0% | 3792.6 / 17.8 | 927 | coding (209/975 nt) | malR | putative maltose operon transcriptional repressor, LacI family |
| Reads supporting (aligned to +/- strand): ref base . (5/4); new base C (467/451); total (472/455) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 964 total aligned reads displayed.
CGAGTCATTAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGT‑C‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCAATTTTCCG > AM406671/732582‑732873 | cGAGTCATTAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGt < 1:2690747/149‑1 (MQ=255) aGTCATTAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGT‑cc > 1:7299902/1‑148 (MQ=255) gTCATTAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGT‑ccg > 1:7170782/1‑147 (MQ=255) aTTAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGT‑ccgccg < 1:1605414/149‑6 (MQ=255) tAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGAc > 1:8263129/1‑149 (MQ=255) aaaGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACa < 2:3635152/149‑1 (MQ=255) aaaGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACa > 2:2494541/1‑149 (MQ=255) aaaGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACa < 1:944017/149‑1 (MQ=255) aaaGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACa > 1:4112533/1‑149 (MQ=255) gACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAg > 2:2032928/1‑149 (MQ=255) cAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCa < 1:5677747/149‑1 (MQ=255) cAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCa > 1:430846/1‑149 (MQ=255) cAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCa < 2:815483/149‑1 (MQ=255) cAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGATGTCTTTCCCCCGGGC‑C‑GCCGACAAAGCAAGTCa > 2:390149/1‑149 (MQ=255) aGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCaa > 1:7576827/1‑149 (MQ=255) aaaTTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAAcc < 2:8755470/149‑1 (MQ=255) aaTTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACct > 2:6866278/1‑149 (MQ=255) tttCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACcttt > 1:7698195/1‑149 (MQ=255) tCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACctttct > 2:2567520/1‑149 (MQ=255) tCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACctttct < 2:6406359/149‑1 (MQ=255) aTAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTGAGAATCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTAt > 2:5778262/1‑149 (MQ=255) aTAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTAt > 1:8077897/1‑149 (MQ=255) tAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATg < 1:4893952/149‑1 (MQ=255) aaCGAAAGTCAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCCGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGaaa > 1:4768477/1‑149 (MQ=255) aaGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAAtttt > 1:7068305/1‑149 (MQ=255) aaGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAAtttt > 1:1855434/1‑149 (MQ=255) aGTACAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCCTTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGACAACCTTTCTTTATGAAAATTTTg > 2:3286298/1‑149 (MQ=255) ggaacaGTTCGCAAAGCCATGCAGGAATGGGGGTATCGTCGTAATGCAGCGCCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGAAGTTGTCTTTCCCCC‑GGT‑CGGCCGACAAGGCAAGTCAACCTTTCTTTATGAGAATTTTGa > 2:1381861/6‑149 (MQ=255) aaaaGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGAcc < 1:3633858/149‑1 (MQ=255) tCGCAAAGCCATGCATGAATTGGGTTATCGTCGTACTGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCtcaatc > 2:1737217/1‑149 (MQ=255) tCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCtcaatc > 1:2891629/1‑149 (MQ=255) cGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCtcaatca < 1:5567409/149‑1 (MQ=255) aaGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGa < 2:3032706/149‑1 (MQ=255) catgcatgAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACt < 1:6364103/149‑1 (MQ=255) catgcatgAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACt > 2:7481208/1‑149 (MQ=255) atgcatgAATTGGGTTATCGTCGTAAGGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTg < 2:5434239/149‑1 (MQ=255) tgcatgAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGc > 1:8317063/1‑149 (MQ=255) tgAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCgg > 1:2073652/1‑149 (MQ=255) tgAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCgg > 1:3345403/1‑149 (MQ=255) aaTTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGa > 2:7328526/1‑149 (MQ=255) tGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTa < 2:5227400/149‑1 (MQ=255) ggTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTatg < 2:7961430/149‑1 (MQ=255) gTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTatga > 1:449062/1‑149 (MQ=255) cgtcgtAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATgtgt < 2:6049068/149‑1 (MQ=255) cgtAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGa < 2:4627183/149‑1 (MQ=255) cgtAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGa > 2:268878/1‑149 (MQ=255) cgtAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGa > 1:5834159/1‑149 (MQ=255) tAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGAtt > 2:7034049/1‑149 (MQ=255) aaTGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAAGTGCTCGGGATTATGATGTGTCGATTg > 1:5148832/1‑149 (MQ=255) tGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGAtgtg < 2:7141729/140‑1 (MQ=255) tGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCt < 2:8333972/149‑1 (MQ=255) cAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTAt > 1:3433601/1‑149 (MQ=255) gCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATcg < 2:8983009/149‑1 (MQ=255) ggCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATcgcg < 2:3182470/149‑1 (MQ=255) gATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGGTGTGTCGATTGCTATCGCGACGGGa < 2:5041911/149‑1 (MQ=255) ttCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACa > 2:6222674/1‑149 (MQ=255) cTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACAtt < 1:4675387/149‑1 (MQ=255) cTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACAtt > 1:3260763/1‑149 (MQ=255) cTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCAGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACAtt < 1:7362251/149‑1 (MQ=255) aGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtcg > 1:1018967/1‑149 (MQ=255) aGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtcg > 1:5953156/1‑149 (MQ=255) aGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtcg > 1:3809704/1‑149 (MQ=255) gCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtcgg < 2:1577419/149‑1 (MQ=255) gCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtcgg < 1:1734815/149‑1 (MQ=255) ttCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtcggtc < 2:4936107/149‑1 (MQ=255) tCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCACTGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtcggtcg < 2:1071094/149‑1 (MQ=255) tCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtcggtcg > 1:2467480/1‑149 (MQ=255) cTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtcggtcgg < 1:41961/149‑1 (MQ=255) cTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATtcggtcgg > 1:2263708/1‑149 (MQ=255) tGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGga < 2:9189297/149‑1 (MQ=255) tGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGga < 2:4435968/149‑1 (MQ=255) tGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGga < 1:1163950/149‑1 (MQ=255) tGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGga < 2:4246981/149‑1 (MQ=255) aaaaaCAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGaa < 1:8895711/149‑1 (MQ=255) aaaaCAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCTGTCGGAGAAt < 2:1214329/149‑1 (MQ=255) aaaCAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCCTTATGAAAATTTTGACCTCAATCAATGACACTGCTCGGGCTTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGCGAAtt > 1:5388321/1‑149 (MQ=255) aaCAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTa > 1:3886767/1‑149 (MQ=255) cAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTaaa > 2:3794765/1‑149 (MQ=255) cAAATACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTaaa > 1:7839059/1‑149 (MQ=255) aaaTACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAaag > 2:2912701/1‑149 (MQ=255) aaTACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAaaga < 2:3413100/149‑1 (MQ=255) aTACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAaagaa < 1:9068223/149‑1 (MQ=255) aTACCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAaagaa > 1:5288025/1‑149 (MQ=255) aCCATTGGAGTTGTCTTTCCCCCGGGC‑C‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATGATGATGGGTCGATTGCTATCGAGACGGGACATTCGGTCGGAGAATTAAAGAAGc < 2:399945/149‑1 (MQ=255) aCCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGAGGGGACATTCGGTCGGAGAATTAAAGAAGc < 2:5674219/149‑1 (MQ=255) aCCATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGc < 1:4015237/149‑1 (MQ=255) ccATTGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCa > 2:6604518/1‑149 (MQ=255) tGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGtt > 1:6771215/1‑149 (MQ=255) tGGAGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGtt > 1:3103079/1‑149 (MQ=255) aGTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGaa > 1:8494809/1‑149 (MQ=255) gTTGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAAc > 1:5050474/1‑149 (MQ=255) ttGTCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACt < 1:8683778/149‑1 (MQ=255) tCTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCa < 1:1458970/149‑1 (MQ=255) cTTTCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCaa > 1:6572021/1‑149 (MQ=255) tttCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCAAt > 1:6941794/1‑149 (MQ=255) tCCCCC‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCAAttt > 2:861180/1‑149 (MQ=255) cccc‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTGAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCAATTTTc > 1:6155809/1‑149 (MQ=255) ccc‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCAATTTTcc > 2:7662769/1‑149 (MQ=255) ccc‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCAATTTTcc < 2:231623/149‑1 (MQ=255) ccc‑GGTCC‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACCGGACATTCGGCCGGAGAATTAACGAAGCAAGTTGAACCTCAATTTTcc > 2:4717928/1‑149 (MQ=255) | CGAGTCATTAAAGACAGTTCAGAAATTTCGGATAAAACGAAAGTAAAAGTTCGCAAAGCCATGCATGAATTGGGTTATCGTCGTAATGCAGCGGCTCAGATTCTAGCTTCTGGAAAAACAAATACCATTGGAGTTGTCTTTCCCCC‑GGT‑C‑GCCGACAAAGCAAGTCAACCTTTCTTTATGAAAATTTTGACCTCAATCAATGAAACTGCTCGGGATTATGATGTGTCGATTGCTATCGCGACGGGACATTCGGTCGGAGAATTAAAGAAGCAAGTTGAACTTCAATTTTCCG > AM406671/732582‑732873 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |