BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM406671	= 2410715	1107 (1.040)	15 (0.020)	14/260	41.5	1.5%	intergenic (‑313/+165)	llmg_2458/llmg_2459	putative fibronectin‑binding protein/conserved hypothetical protein
*	?	AM406671	2411162 =	1063 (1.130)	15 (0.020)	14/260	41.5	1.5%	intergenic (‑34/+39)	llmg_2459/llmg_2460	conserved hypothetical protein/conserved hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1212 total aligned reads displayed.

TTTTACCATCTTCTGTAGCAATTTTTTCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTCCACCAAGTAGTACATCATTCCAATGTGTTTTATTCATAT  >  AM406671/2411014‑2411310

ttttACCATCTTCTGTAGCAATTTTTTCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTa                                                                                                                                                      <  1:7669481/149‑1 (MQ=255)

  ttACCATCTTCTGTAGCAATTTTTTCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTagg                                                                                                                                                    <  1:4604370/149‑1 (MQ=255)

  ttACCATCTTCTGTAGCAATTTTTTCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTagg                                                                                                                                                    <  2:63503/149‑1 (MQ=255)

   tACCATCTTCTGTAGCAATTTTTTCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTagga                                                                                                                                                   <  1:7893680/149‑1 (MQ=255)

    aCCATCTTCTGTAGCAATTTTTTCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTaggag                                                                                                                                                  <  1:1423766/149‑1 (MQ=255)

    aCCATCTTCTGTAGCAATTTTTTCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTaggag                                                                                                                                                  >  1:3289295/1‑149 (MQ=255)

          ttctGTAGCAATTTTTTCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTaaa                                                                                                                                            <  2:7642229/149‑1 (MQ=255)

           tctGTAGCAATTTTTTCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAAc                                                                                                                                           >  1:1145290/1‑149 (MQ=255)

            ctGTAGCAATTTTTTCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACt                                                                                                                                          <  1:1871368/149‑1 (MQ=255)

            ctGTAGCAATTTTTTCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACt                                                                                                                                          <  2:2212154/149‑1 (MQ=255)

               tAGCAATTTTTTCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCAc                                                                                                                                       <  1:596042/149‑1 (MQ=255)

                aGCAATTTTTTCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCAct                                                                                                                                      >  2:4906358/1‑149 (MQ=255)

                aGCAATTTTTTCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCAct                                                                                                                                      >  1:101256/1‑149 (MQ=255)

                 gCAATTTTTTCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCCTTCTTGAAAACCTTTTAAAAAATTTTGTTCGTAACTCATGTTTCCTTCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCActt                                                                                                                                     >  2:1459185/1‑149 (MQ=255)

                  cAATTTTTTCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCActtc                                                                                                                                    <  1:9186310/149‑1 (MQ=255)

                    aTTTTTTCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCActtctt                                                                                                                                  <  1:2394355/149‑1 (MQ=255)

                       ttttCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTa                                                                                                                               <  2:7485263/149‑1 (MQ=255)

                        tttCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTCGGAGGGTAAACTCACTTCTTTTaa                                                                                                                              >  2:4143075/1‑149 (MQ=255)

                         ttCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTaaa                                                                                                                             <  2:1540695/149‑1 (MQ=255)

                          tCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTaaaa                                                                                                                            <  2:2011114/149‑1 (MQ=255)

                           cagcagCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTaaaaa                                                                                                                           <  2:2824168/149‑1 (MQ=255)

                            ggcagcTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGACATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAat                                                                                                                          <  2:5755811/148‑1 (MQ=255)

                              cagcTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAatat                                                                                                                        >  1:4231822/1‑149 (MQ=255)

                              cagcTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAatat                                                                                                                        <  1:6118318/149‑1 (MQ=255)

                                gcTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTa                                                                                                                      >  2:9107578/1‑149 (MQ=255)

                                  tttCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGt                                                                                                                    >  1:1521788/1‑149 (MQ=255)

                                  tttCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGt                                                                                                                    >  1:6971091/1‑149 (MQ=255)

                                        ggCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGtatcttt                                                                                                              <  1:2705378/149‑1 (MQ=255)

                                        ggCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGtatcttt                                                                                                              >  2:867406/1‑149 (MQ=255)

                                        ggCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGtatcttt                                                                                                              >  1:6664587/1‑149 (MQ=255)

                                         gCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGtatcttta                                                                                                             >  2:1220494/1‑149 (MQ=255)

                                             gTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGtatctttatctt                                                                                                         >  1:3008135/1‑149 (MQ=255)

                                              ttCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAAGTTTGTTCGTAAGTCATTTTTTTTTTTTTTTTATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTatctttatcttt                                                                                                        >  2:5176394/1‑149 (MQ=255)

                                                 aGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTgg                                                                                                     <  2:8992307/149‑1 (MQ=255)

                                                  gAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTggg                                                                                                    <  1:553709/149‑1 (MQ=255)

                                                    aaTTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTGTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGtt                                                                                                  <  1:360992/149‑1 (MQ=255)

                                                     aTTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGttt                                                                                                 >  2:674484/1‑149 (MQ=255)

                                                       ttGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTTGGTTTgt                                                                                               >  1:2849952/1‑148 (MQ=255)

                                                       ttGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGa                                                                                               <  1:2012672/149‑1 (MQ=255)

                                                          aaCTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTa                                                                                            >  2:5449540/1‑149 (MQ=255)

                                                          aaCTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTa                                                                                            >  1:8500372/1‑149 (MQ=255)

                                                            cTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAGATTTTGTGCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTACAAATATTAGTATCTTTATCTTTTGGGTTTGATTaaa                                                                                          <  2:6179138/149‑1 (MQ=255)

                                                            cTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTaaa                                                                                          >  2:885958/1‑149 (MQ=255)

                                                             ttgttgGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAAt                                                                                         <  1:6824284/149‑1 (MQ=255)

                                                              tgttgGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATc                                                                                        <  1:8203009/149‑1 (MQ=255)

                                                              tgttgGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTAATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATc                                                                                        <  1:51803/149‑1 (MQ=255)

                                                                 tgGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTTTTTTTTTTTATGTGAGACCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATa                                                                                     >  2:8492969/1‑149 (MQ=255)

                                                                 tgGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATa                                                                                     <  1:6544443/149‑1 (MQ=255)

                                                                   gTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGc                                                                                   <  2:2957363/149‑1 (MQ=255)

                                                                    tCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCt                                                                                  <  2:1710017/149‑1 (MQ=255)

                                                                     cTACCCATTCTTGACATTCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCCGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCtt                                                                                 <  1:4464414/149‑1 (MQ=255)

                                                                      tACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTATGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCttt                                                                                <  1:4744423/149‑1 (MQ=255)

                                                                       aCCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTg                                                                               >  1:8344786/1‑149 (MQ=255)

                                                                          cATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTc                                                                            >  2:3393350/1‑149 (MQ=255)

                                                                           aTTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCa                                                                           >  1:6255071/1‑149 (MQ=255)

                                                                            ttCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCaa                                                                          >  1:970154/1‑149 (MQ=255)

                                                                               ttGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCa                                                                       >  1:5356687/1‑149 (MQ=255)

                                                                                tGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCAt                                                                      >  1:31421/1‑149 (MQ=255)

                                                                                    aaTCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTg                                                                  >  1:1683711/1‑149 (MQ=255)

                                                                                      tCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGca                                                                <  1:22239/149‑1 (MQ=255)

                                                                                       cTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGcac                                                               >  2:2557630/1‑149 (MQ=255)

                                                                                         tttAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCacac                                                             >  1:8684923/1‑149 (MQ=255)

                                                                                          ttAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTTCACACt                                                            >  1:2510005/1‑149 (MQ=255)

                                                                                           tAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACtt                                                           <  2:7806233/149‑1 (MQ=255)

                                                                                            aaaaaaTTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTg                                                          <  2:5595314/149‑1 (MQ=255)

                                                                                             aaaaaTTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGc                                                         <  1:710106/149‑1 (MQ=255)

                                                                                             aaaaaTTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGc                                                         <  1:3475336/149‑1 (MQ=255)

                                                                                                 aTTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCtcat                                                     <  2:3920232/149‑1 (MQ=255)

                                                                                                  ttttGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCtcatc                                                    >  1:6420132/1‑149 (MQ=255)

                                                                                                   tttGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCtcatca                                                   >  2:3178463/1‑149 (MQ=255)

                                                                                                    ttGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAg                                                  <  2:6896277/149‑1 (MQ=255)

                                                                                                      gTTCGTAAGTCACTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGATGGTAATCTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGGTTAAATCATAGCTGTGCTCAACCATTTTGCACACTTGCTCATCAGCg                                                <  2:3526502/149‑1 (MQ=255)

                                                                                                       ttCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGa                                               >  2:1872361/1‑149 (MQ=255)

                                                                                                        tCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGAc                                              >  1:4058955/1‑149 (MQ=255)

                                                                                                          gTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACAt                                            >  2:4341043/1‑149 (MQ=255)

                                                                                                           tAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACAtc                                           >  1:3752026/1‑149 (MQ=255)

                                                                                                           tAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACAtc                                           >  2:6583244/1‑149 (MQ=255)

                                                                                                            aaGTCATTTTTTTTCTTTTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACAtct                                          >  2:8035274/1‑149 (MQ=255)

                                                                                                             aGTCATCTTTTCTCCTTTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACAtctc                                         <  2:8280070/149‑1 (MQ=255)

                                                                                                              gTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTcc                                        >  1:8798896/1‑149 (MQ=255)

                                                                                                              gTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTcc                                        >  1:8938441/1‑149 (MQ=255)

                                                                                                              gTCATTTTTTCTCCTGTAAAATGGACGCCCGACTGCTTAGGAGGGTAAAGTCTCTTCTTTTAAAAATATTAGTCTCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTcc                                        >  2:5015976/1‑149 (MQ=255)

                                                                                                                cATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTccac                                      >  1:8068868/1‑149 (MQ=255)

                                                                                                                  ttttttCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTccacca                                    <  1:7248778/149‑1 (MQ=255)

                                                                                                                   tttttCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTCCACCaa                                   <  1:5683383/149‑1 (MQ=255)

                                                                                                                      ttCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTCCACCAagta                                >  1:501205/1‑149 (MQ=255)

                                                                                                                        ctcCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTCCACCAagtagt                              <  2:2658326/149‑1 (MQ=255)

                                                                                                                          ccTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTCCACCAAGTAGTAc                            <  1:1251141/149‑1 (MQ=255)

                                                                                                                            tGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTCCACCAAGTAGTAcat                          >  1:9103061/1‑149 (MQ=255)

                                                                                                                               aaaaTGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTCCACCAAGTAGTAcatcat                       <  2:7408975/149‑1 (MQ=255)

                                                                                                                               aaaaTGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTCCACCAAGTAGTAcatcat                       <  2:3670988/149‑1 (MQ=255)

                                                                                                                               aaaaTGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTCCACCAAGTAGTAcatcat                       <  1:3887555/149‑1 (MQ=255)

                                                                                                                                 aaTGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTCCACCAAGTAGTACATCATTc                     >  2:5957467/1‑149 (MQ=255)

                                                                                                                                 aaTGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTCCACCAAGTAGTACATCATTc                     >  2:7325928/1‑149 (MQ=255)

                                                                                                                                  aTGTGAGCCTGCCTGCTTAGGAGAGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTCATTAAACCATAGCTTTGCTCCACCATTTTGCACACTTGCTCATCAGCTACCTCTCCACCAAGTAGTACATCATTcc                    <  2:2412637/149‑1 (MQ=255)

                                                                                                                                  aTGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTCCACCAAGTAGTACATCATTcc                    >  2:715249/1‑149 (MQ=255)

                                                                                                                                    gtgAGCCCGACTGCTTAGGAGGGTAAGCTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTCCACCAAGTAGTACATCATTCCaa                  >  2:4518594/1‑149 (MQ=255)

                                                                                                                                       aGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTCCACCAAGTAGTACATCATTCCAAtgt               >  1:4859142/1‑149 (MQ=255)

                                                                                                                                           cGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTCCACCAAGTAGTACATCATTCCAATGTGttt           >  1:7446562/1‑149 (MQ=255)

                                                                                                                                                 cTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTCCACCAAGTAGTACATCATTCCAATGTGTTTTATTCa     <  2:465119/149‑1 (MQ=255)

TTTTACCATCTTCTGTAGCAATTTTTTCAGCAGCTTTCATGGCAAGTTCAGAAATTTGAACTTGTTGGTCTACCCATTCTTGAAAATCTTTTAAAAAATTTTGTTCGTAAGTCATTTTTTCTCCTGTAAAATGTGAGCCCGACTGCTTAGGAGGGTAAACTCACTTCTTTTAAAAATATTAGTATCTTTATCTTTTGGGTTTGATTAAATCATAGCTTTGCTCAACCATTTTGCACACTTGCTCATCAGCGACATCTCCACCAAGTAGTACATCATTCCAATGTGTTTTATTCATAT  >  AM406671/2411014‑2411310

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.