| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 876,869 | C→G | H82D (CAT→GAT) | amtB → | ammonium transporter AmtB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 876,869 | 0 | C | G | 98.9% | 3539.5 / NA | 883 | H82D (CAT→GAT) | amtB | ammonium transporter AmtB |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (396/475); minor base A (0/10); total (396/487) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.77e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 883 total aligned reads displayed.
GTAAAAATGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTACATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTACTTTT > AM406671/876723‑877014 | gTAATAATGTATTGAAGACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTGTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGat < 2:191533/149‑1 (MQ=255)gTAAAAATGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGTCCATTTGTTTATGAATGGTGTAGat > 2:6269953/1‑149 (MQ=255)gTAAAAATGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGat < 2:2358995/149‑1 (MQ=255) tAAAAATGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGata < 1:4228867/149‑1 (MQ=255) aaaaaTGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGatat > 1:6446810/1‑149 (MQ=255) aaaTGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGTAAATAATAGTTCGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑gg < 2:80888/149‑1 (MQ=255) tGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGACa > 2:5283700/1‑149 (MQ=255) aTTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCaaaa < 1:8440865/149‑1 (MQ=255) aTTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCaaaa < 2:6108054/149‑1 (MQ=255) aTTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCaaaa > 2:2971065/1‑149 (MQ=255) aTACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCTAATAATTct > 2:2649620/1‑148 (MQ=255) aCAATCATTATTTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGAGTAATGATTGGCGTTTCATTTTATTTTTCTAGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATAGTGTAGATAT‑GGCCAAAcattcatt < 2:2129951/149‑1 (MQ=255) cAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCatta < 2:6923110/149‑1 (MQ=255) aaTGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATGGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCattat < 1:5503368/149‑1 (MQ=255) atgatgatgTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAACATTCattatt > 2:5581779/1‑149 (MQ=255) agatgatgTCCTTGGCTCCAATGGCTCTGGCTGCCATTTTATGGGTAATTATGGGCTTTTCATTTTCTATTTCTGGAAAAAATAGTTGTATTGGAAATTTTGACCATTTGTTTAGAAACGGTGTAGATAT‑GGCCAAAAATTCATTAttt < 2:3736529/148‑1 (MQ=255) tgatgTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATCT‑GGCCAGGAGTTCATTATTTCCt > 2:3489676/1‑149 (MQ=255) tgatgTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCt > 1:4108392/1‑149 (MQ=255) gatgTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGTTTTTAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTg > 2:7344313/1‑149 (MQ=255) tgTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGcc > 2:7570446/1‑149 (MQ=255) tgTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGcc > 1:5771389/1‑149 (MQ=255) gTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGTGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCa > 1:3851634/1‑149 (MQ=255) gTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTAGTTCCTGCCa < 1:4752765/149‑1 (MQ=255) tCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCaa > 1:8011367/1‑149 (MQ=255) cATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAAt > 2:3316275/1‑149 (MQ=255) cATTGGCTCCAATGGCTCTGGCTTCCATTTCATGGGTAATTATTGGCTTTCCATTTTCTTTTTCTGGAAATACTAGTTGGATTGGATATTTTGACTATTTGTTTCTGAATGGTGTAGATAT‑GGCCTAAAATTCATTATTTCCTGCCAAt > 2:3147847/1‑149 (MQ=255) tCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTc < 1:4016086/149‑1 (MQ=255) tCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTc > 1:9265157/1‑149 (MQ=255) ccAATGGCTCTTGCTTCCATTTTATGGGTAATTATTGGCTTTTCAATTTATTTTTCTGGAAATAATAGTTGGAATGGAAATTTTGACCATTTGTTTATGAATGGTGTAAAAAT‑AAAAAAAAATTCATTATTTCCTGCCAATCACATTcc < 2:4842590/149‑1 (MQ=255) ccAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTcc < 1:6711883/149‑1 (MQ=255) aaTGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTg > 2:8556345/1‑149 (MQ=255) aTGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCTAGAAATTCATTATTTACTACCAATCACATTCCtta > 2:9061150/1‑147 (MQ=255) tGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCtt < 2:547259/149‑1 (MQ=255) tGGCTTCCATTTTATGGGTAATTATTGGCTTTTCAGTATCGTTCTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATCAATGGTGTAACAAA‑AAAAAAAAATTCATTATTTCGTGCCAATCACATTCCTTACGGCCtt < 2:5009157/149‑1 (MQ=255) ggCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCttt < 2:6477335/149‑1 (MQ=255) gCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCtttt < 1:9055768/149‑1 (MQ=255) gCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCtttt > 1:7003312/1‑149 (MQ=255) gCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCtttt < 2:8304610/149‑1 (MQ=255) tCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAGATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTc < 2:2769574/149‑1 (MQ=255) tCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTc > 1:8934981/1‑149 (MQ=255) cATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTg < 1:3093925/149‑1 (MQ=255) tATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGtttt < 2:1081023/149‑1 (MQ=255) aTGTGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATCATATTTGGATTGGAGATTTTGACCATTTGTTTATGAATGGTGTAGATCT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTc < 1:7894172/149‑1 (MQ=255) aTGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTc > 2:1217094/1‑149 (MQ=255) tGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATCT‑CGCCAAAAATTCATTCTTTCCTGCCAATCACATTCCTGACGGCCTTTTTTTTTCTTTTCa > 2:431037/1‑149 (MQ=255) gggTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAg > 1:2742423/1‑149 (MQ=255) gggTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCATTTTTCTGGTTTTCAg > 1:6196615/1‑149 (MQ=255) ggTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAga > 1:2914659/1‑149 (MQ=255) ggTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAga < 1:3497969/149‑1 (MQ=255) gTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAgat > 1:1884960/1‑149 (MQ=255) attGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGtt < 1:8192805/149‑1 (MQ=255) ttGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGttt > 1:8576826/1‑149 (MQ=255) gCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCg < 1:98191/149‑1 (MQ=255) cTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGa < 2:9214572/149‑1 (MQ=255) tttCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGatt < 1:2019128/149‑1 (MQ=255) tttCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGatt > 1:3183161/1‑149 (MQ=255) ttCATTTTCTTTTTCTGGAAATAATACTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGatta < 1:7394807/149‑1 (MQ=255) tCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCa < 1:3349841/131‑1 (MQ=255) ttttctttttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGACAT‑GGCCAGAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTAc > 2:5746230/1‑149 (MQ=255) ttttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGCTTATTACGGTCGc > 1:21471/1‑149 (MQ=255) tttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCt < 2:8744281/149‑1 (MQ=255) tttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCt < 1:492889/149‑1 (MQ=255) ttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCtt < 2:8209147/149‑1 (MQ=255) ttctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCtt > 1:7245896/1‑149 (MQ=255) tctGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGCTGATGTTTTCGATTATTACGGTCGCttt > 1:6349325/1‑149 (MQ=255) aaaTAATAGTTGGATTTGAAAGTTTGATCATTTGTTTATGAATGGTGTAGAGAT‑GGCCAAAAATTCATTATTTCCGGCCAATCACATTGCTGACGGCGTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTa < 1:1665711/149‑1 (MQ=255) ataataGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCa < 2:1465382/112‑1 (MQ=255) ataataGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACa > 1:6509987/1‑149 (MQ=255) taataGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATCT‑GGGCAGAAGTCGTTTCTTTCATGACAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAg > 2:7193161/1‑149 (MQ=255) aataGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAGAAATTCATTATTTCCTGAAAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAgg > 2:3997642/1‑149 (MQ=255) aataGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAgg < 1:7478402/149‑1 (MQ=255) ataGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGc > 1:8108053/1‑149 (MQ=255) taGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCt < 2:671875/149‑1 (MQ=255) ggattggaAATTTTGACCATTTGTTTATGAATGGTGTAGATCTCGGTGGTCGCCGTATCA‑TTAAAACCAATAAAATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTTATTACAGACTCGGTa > 2:2040528/1‑149 (MQ=255) gattggaAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAg > 1:3637740/1‑149 (MQ=255) gattggaAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGAGGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGtcg > 1:8712111/1‑147 (MQ=255) ttggaAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGtt > 1:1026381/1‑149 (MQ=255) ggaAATTTTGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTgg < 2:8443645/149‑1 (MQ=255) tttGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGAAGGAt > 1:5200094/1‑149 (MQ=255) ttGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATg > 1:4602759/1‑149 (MQ=255) tgcccATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAGATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATga < 2:5140141/146‑1 (MQ=255) tGACCATTTGTTTATGAATGGTGTAGATCT‑CGGTGGTCGCTGATTCTTTACAGAAAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATga > 2:4571889/1‑149 (MQ=255) tGACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATga < 1:5028462/149‑1 (MQ=255) gACCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATgag < 2:8011367/149‑1 (MQ=255) aCCATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATgaga < 2:3904016/149‑1 (MQ=255) ccATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGAt < 1:5679589/149‑1 (MQ=255) ccATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGAt < 1:4413434/149‑1 (MQ=255) cATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGAtt > 1:2563092/1‑149 (MQ=255) cATTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGAGGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGAtt < 1:5396338/149‑1 (MQ=255) aTTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGAttt > 1:5920789/1‑149 (MQ=255) aTTTGTTTATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTATCGATTATTACGGTCGCTTGGATTACAGGCTAGGTAGTTGGGGGGATGAGAttt > 1:771369/1‑149 (MQ=255) ttATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCt < 2:5896795/149‑1 (MQ=255) ttATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCt < 1:1193672/149‑1 (MQ=255) ttATGAATGGTGTAGATAT‑GGCCAAAAATTCATTATTTCATGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCt < 1:2347370/149‑1 (MQ=255) aaTGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCt > 2:409751/1‑149 (MQ=255) tGGTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTAc < 1:6853162/149‑1 (MQ=255) ggTGTAGATAT‑GGGCAGAAGCCGATTCTTTCCTGCAAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCCACt > 2:248851/1‑149 (MQ=255) ggTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTACt < 2:777450/149‑1 (MQ=255) ggTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTACt < 2:1754283/149‑1 (MQ=255) ggTGTAGATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTACt < 1:1393003/149‑1 (MQ=255) | GTAAAAATGTATTGAATACAATGATGATGTCATTGGCTCCAATGGCTCTGGCTTCCATTTTATGGGTAATTATTGGCTTTTCATTTTCTTTTTCTGGAAATAATAGTTGGATTGGAAATTTTGACCATTTGTTTATGAATGGTGTACATAT‑GGCCAAAAATTCATTATTTCCTGCCAATCACATTCCTGACGGCCTTTTTTCTGGTTTTCAGATGATGTTTTCGATTATTACGGTCGCTTTGATTACAGGCTCGGTAGTTGGGAGGATGAGATTTACTCCTATTCTACTTTT > AM406671/876723‑877014 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |