| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 1,731,090 | T→C | G335G (GGA→GGG) | llmg_1749 ← | putative membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 1,731,090 | 0 | T | C | 99.8% | 4022.2 / NA | 963 | G335G (GGA→GGG) | llmg_1749 | putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (472/487); total (475/488) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 992 total aligned reads displayed.
AATCAGTAAAATTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAATCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAATTGAAATTC > AM406671/1730944‑1731235 | aaTCAGTAAAATTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAAccc > 2:6455012/1‑149 (MQ=255) tCAGTAAAATTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCGCAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCaa > 2:7489192/1‑149 (MQ=255) tCAGTAAAATTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCaa < 2:3188281/149‑1 (MQ=255) cAGTAAAATTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAg < 2:3878396/149‑1 (MQ=255) aaaTTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTaa > 2:577558/1‑149 (MQ=255) aaaTTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTaa < 1:2312593/149‑1 (MQ=255) aTTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGa > 2:4890567/1‑149 (MQ=255) ttAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGAc > 2:1709220/1‑149 (MQ=255) tAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGAcc < 1:4745034/149‑1 (MQ=255) ggATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCg < 2:4034500/149‑1 (MQ=255) ggATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCg > 2:4416737/1‑149 (MQ=255) ggATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCg > 2:8593524/1‑149 (MQ=255) cAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGc > 2:8490075/1‑149 (MQ=255) agagTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCaa < 1:4289984/149‑1 (MQ=255) agTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAata > 1:5490952/1‑149 (MQ=255) gCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATaa < 2:4988700/149‑1 (MQ=255) gCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATaa > 1:3882745/1‑149 (MQ=255) aTTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGa < 2:7899024/149‑1 (MQ=255) aTTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGa < 2:8207909/149‑1 (MQ=255) cATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCa > 2:275776/1‑149 (MQ=255) cATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCa < 2:375367/149‑1 (MQ=255) aTAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCaa > 2:7227297/1‑149 (MQ=255) tAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAg > 1:4887919/1‑149 (MQ=255) tAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAg > 2:1248066/1‑149 (MQ=255) aaaGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGa > 2:1875647/1‑149 (MQ=255) aGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAAt > 2:2185343/1‑149 (MQ=255) aaCTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAAttt > 1:3077228/1‑149 (MQ=255) aCTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTc > 1:9135594/1‑149 (MQ=255) tcctttccttGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCAtt < 2:9015100/149‑1 (MQ=255) ccctttccttGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCAtt > 2:1520313/2‑149 (MQ=255) cctttccttGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCAttt < 2:4735313/149‑1 (MQ=255) cctttccttGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCAttt < 1:2773303/149‑1 (MQ=255) tttccttGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTtcc > 2:6953669/1‑148 (MQ=255) tcctgGATGATTTCTAGTCAAAGCAACACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAAGGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCa < 2:1366843/149‑1 (MQ=255) cttGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCaat > 2:629484/1‑149 (MQ=255) gatgatTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCaataat < 1:4125731/149‑1 (MQ=255) tgatTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAAtaataa < 2:293655/149‑1 (MQ=255) gatTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATaaa < 2:3528471/149‑1 (MQ=255) gatTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATaaa < 1:8544737/149‑1 (MQ=255) atTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATaaaa < 1:5848344/149‑1 (MQ=255) tttCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAg < 2:3692877/149‑1 (MQ=255) aGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCa < 2:8014103/149‑1 (MQ=255) gTCGAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCAt < 2:5976372/149‑1 (MQ=255) aaaGCAAAACTTGTGAAAACCGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTACGACCAAACGTTGCAATATAAGACCAAGAATTTCCATTACTCAATAATAAAAGCGTAATCgg > 2:5518737/1‑149 (MQ=255) aaaGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCgg > 1:1908733/1‑149 (MQ=255) aaGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGc < 1:3615028/149‑1 (MQ=255) aGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCa < 2:8894685/149‑1 (MQ=255) aaaaCTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAg < 2:4530516/149‑1 (MQ=255) aaaCTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGt < 2:7125447/149‑1 (MQ=255) aaaCTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGt > 1:7878794/1‑149 (MQ=255) tgtgAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCg < 1:2042351/149‑1 (MQ=255) aaaaCAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCAt > 1:7387285/1‑149 (MQ=255) aCAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGCATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGaa > 1:725008/1‑149 (MQ=255) cAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAAGCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGAGTCATCGGCAAAGTTTCCGcccacaaa > 2:6666872/1‑143 (MQ=255) aGCGGTAATTGGCACAGCGAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGTGTCATCGGCAAAGTTTCCGCCATGaaaa < 2:5352991/149‑1 (MQ=255) cGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATc > 2:2324946/1‑149 (MQ=255) cGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATc < 2:3284602/149‑1 (MQ=255) ggTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCa < 2:4229738/149‑1 (MQ=255) ggTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCa < 1:7535165/149‑1 (MQ=255) aTTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGaa < 1:1412915/149‑1 (MQ=255) ttGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAAc < 1:4366579/149‑1 (MQ=255) tGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACa < 2:9135594/149‑1 (MQ=255) tGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACa < 1:5055004/149‑1 (MQ=255) acaGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAAc < 1:2186854/149‑1 (MQ=255) acaGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAAc < 1:8150520/149‑1 (MQ=255) caGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACa > 2:7713724/1‑149 (MQ=255) aGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACAt > 1:806096/1‑149 (MQ=255) gCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACAtt > 1:5995981/1‑149 (MQ=255) tAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTg < 1:7748309/149‑1 (MQ=255) tAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTg < 1:6091068/149‑1 (MQ=255) aaCACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGt < 1:8959088/149‑1 (MQ=255) aaCACGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGt > 2:60584/1‑149 (MQ=255) acacGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTc > 1:2887175/1‑149 (MQ=255) acGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCACAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCaa > 1:6638461/1‑149 (MQ=255) cGATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCaaa > 1:8388530/1‑149 (MQ=255) gATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAg < 1:8261407/149‑1 (MQ=255) gATTCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAg < 1:8758300/149‑1 (MQ=255) ttCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCAt > 1:4012737/1‑100 (MQ=255) tCCAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTc > 2:2502237/1‑149 (MQ=255) ccAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAACAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTcc < 1:3461732/149‑1 (MQ=255) cAATGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCa < 1:1035133/149‑1 (MQ=255) aTGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAAt < 1:1298045/149‑1 (MQ=255) aTGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACAAAGAATTTCCATTTCTCAATAATAAAAGCTTCATCGGCAACGTTTCCGCGATGAAAATCTTGAACAAAACATTCGTCAAAGTTCCAAt > 2:6874170/1‑149 (MQ=255) tGGCCGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATg > 1:1571783/1‑149 (MQ=255) cGAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGct < 2:3381335/149‑1 (MQ=255) gAAATAATCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGctc < 2:5258660/149‑1 (MQ=255) aaaTAATCGTTTGTAATAAACCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAACGTTCCAATGAGatct > 2:5643248/1‑149 (MQ=255) taatCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGc > 1:6812733/1‑149 (MQ=255) atCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGccc > 1:3266813/1‑149 (MQ=255) tCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCa < 1:2519334/149‑1 (MQ=255) tCGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCa > 1:5654038/1‑149 (MQ=255) cGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCATAGTTCCAATGAGCTCTTACCCaa > 1:5207101/1‑149 (MQ=255) cGTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCaa > 1:2678456/1‑149 (MQ=255) gTTTGTAATAACCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAAt < 1:701990/149‑1 (MQ=255) taataaCCCAAGATTAAGACCAACCGTTGCAATATAAGACCCAGGATTTTCATTTCTGAATAAGAGAAGCGTCATCGGCAAAGTTTCCGCCATGAGAATCATGATCAAAACATTTGTCAAAGTTCCACTGAGCTCTTGCCCAATTGaaa < 2:2021861/149‑1 (MQ=255) taataaCCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAATTGaaa > 1:954739/1‑149 (MQ=255) aataacCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAATTGAAAt < 1:6361468/149‑1 (MQ=255) aataacCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAATTGAAAt > 1:1208323/1‑149 (MQ=255) ataacCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAATTGAAAtt < 2:7366221/149‑1 (MQ=255) taacCCAAGATTAAGACCAGCCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAATTGAAATTc < 1:4522932/149‑1 (MQ=255) | AATCAGTAAAATTAATAGGATCAAGAGTGCATTCATAAAGAACTCTCCTTTCCTTGATGATTTCTAGTCAAAGCAAAACTTGTGAAAACAGCGGTAATTGGCACAGCTAACACGATTCCAATGGCCGAAATAATCGTTTGTAATAATCCAAGATTAAGACCAACCGTTGCAATATAAGACCAAGAATTTCCATTTCTCAATAATAAAAGCGTCATCGGCAAAGTTTCCGCCATGAAAATCATGAACAAAACATTTGTCAAAGTTCCAATGAGCTCTTGCCCAATTGAAATTC > AM406671/1730944‑1731235 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |