| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 1,921,516 | C→T | intergenic (‑6/‑379) | llmg_1941 ← / → glnP | conserved hypothetical protein/glutamine ABC transporter permease and substrate binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 1,921,516 | 0 | C | T | 99.9% | 4157.0 / NA | 1079 | intergenic (‑6/‑379) | llmg_1941/glnP | conserved hypothetical protein/glutamine ABC transporter permease and substrate binding protein |
| Reads supporting (aligned to +/- strand): ref base C (0/1); major base T (539/537); minor base G (0/1); total (539/540) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 1087 total aligned reads displayed.
AAAGGGGAAAATTACTAAACCTGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATGTTGACCATTAGGCATCTGGGCAAAATTCCGCCATCCACTCCATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATCCCTTTTCAAAAGTTTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAATATAAACTTTTCTTATATTTTATTCAGGAGAACTCTT > AM406671/1921367‑1921665 | aaaGGGGAAAATTACTAAACCTGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATtcc > 1:7068244/1‑149 (MQ=255) aaGGGGAAAATTACTAAACCTGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCt > 2:4191266/1‑149 (MQ=255) aaGGGGAAAATTACTAAACCTGGTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGGACAAACATAATATTCCt > 2:4631231/1‑149 (MQ=255) aaGGGGAAAAGTACTAACCCTGTTTCAATAAAGATAATCGCTCTTAAAACAACATAACTCGAAATG‑TGACCAATAGGCATCTGGGCAAAATT‑CGCCATCCACT‑AATTAAAGAAACCAAAAATGGAAAGTTGTACAAACATAATATTCCt > 2:526420/1‑149 (MQ=255) aGGGGAAAATTACTAAACCTGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAGATCGAAAGTTGTACAAACATAATATTCCtt > 1:807966/1‑149 (MQ=255) aGGGGAAAATTACTAAACCTGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCtt > 1:6276623/1‑149 (MQ=255) aGGGGAAAATTACTAAACCTGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCtt < 2:6323763/149‑1 (MQ=255) gggAAAATTACTAAACCTGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCtttt > 2:1351394/1‑149 (MQ=255) gggAAAATTACTAAACCTGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCtttt < 2:2905790/149‑1 (MQ=255) gggAAAATTACTAAACCTGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACAAAAAATCGAAAGTTGTACAAACATAATATTCCtttt < 2:3486120/149‑1 (MQ=255) ggAAAATTACTAAACCTGTTTCAATAAANATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTc > 1:5110370/1‑149 (MQ=255) ggAAAATTACTAAACCTGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTc < 2:5071133/149‑1 (MQ=255) ggAAAATTACTAAACCTGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTc > 2:4111957/1‑149 (MQ=255) gAAAATTACTAAACCTGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCa > 1:1007701/1‑149 (MQ=255) ttACTAAACCTGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAGt < 1:4463412/149‑1 (MQ=255) tACTAAACCTGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAGtt < 1:3045441/149‑1 (MQ=255) tACTAAACCTGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAGtt > 2:6056902/1‑149 (MQ=255) tAAACCTGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAGttaaa > 2:247088/1‑146 (MQ=255) tAAACCTGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAGttaaa > 1:4360682/1‑146 (MQ=255) aaaCCTGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAGTTaaaa > 2:9164082/1‑149 (MQ=255) aaCCTTTTTAAATAAAGAGAATCGCTCCTAAAAGAACATAAATCCAAAT‑ATGACCATTAAGCATCTGGGCAAAATT‑CGCCATACACT‑CAAAAAAAAAAAAAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAGTTAaaaa < 2:8735870/149‑1 (MQ=255) ccTGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAAtt < 1:3641340/149‑1 (MQ=255) cTGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTc < 2:7689067/149‑1 (MQ=255) tGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATGCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCt < 1:6677392/149‑1 (MQ=255) tGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCt > 1:2869636/1‑149 (MQ=255) tGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCt < 1:8366585/149‑1 (MQ=255) gTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCtt < 1:569964/149‑1 (MQ=255) tttCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTa > 1:3752398/1‑149 (MQ=255) aaTAAAGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACagt < 2:8576286/149‑1 (MQ=255) aaGATAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGtt < 2:4531532/149‑1 (MQ=255) aTAATCGCTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTg > 2:6778039/1‑149 (MQ=255) cGCTCCTAAAACAACATAAATTCAAATG‑TGACTATTAGGCATCTGGGCAAAATT‑CGCCATTCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTat > 2:1578020/1‑148 (MQ=255) gCTACTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACACACATAATATTCC‑TTTAAAAAAAAAAAAAATTCTTACAGTAGTTCTGTTTACt < 2:4323868/149‑1 (MQ=255) cTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACtt > 2:6562444/1‑149 (MQ=255) cTCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACtt > 2:8328585/1‑149 (MQ=255) tCCTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTa > 2:1222767/1‑149 (MQ=255) cTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTaaa < 1:5266167/149‑1 (MQ=255) cTAAAACAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTaaa > 2:7369216/1‑149 (MQ=255) aaaaCAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATa > 2:1097125/1‑149 (MQ=255) aaaCAACATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAg < 1:595949/149‑1 (MQ=255) aacaacATAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGa > 2:4928915/1‑149 (MQ=255) acaTAAATCCAAATG‑TGACCATTAGGCATCTAGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCGTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATAc > 2:370486/1‑149 (MQ=255) aTAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACAt < 1:6391659/149‑1 (MQ=255) tAAATCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATa < 1:156780/149‑1 (MQ=255) aaaTCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATaa > 1:6874149/1‑149 (MQ=255) aaaTCCAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATaa < 1:1929765/149‑1 (MQ=255) aaTCCAAATG‑TGACCATTAGGCATCTGAGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATaaa < 2:8999858/149‑1 (MQ=255) cAAATG‑TGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATAtc > 1:7870713/1‑149 (MQ=255) tgtGACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTa < 1:2455609/147‑1 (MQ=255) tGACCATTAGGCATCTGGGCAAACTT‑CGCCATCCACT‑CAGTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAACATCTCTATc > 1:6550301/1‑149 (MQ=255) gACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCa > 2:3039364/1‑149 (MQ=255) gACCATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCa > 1:7676220/1‑149 (MQ=255) ccATTAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAg > 2:3348526/1‑149 (MQ=255) aTTAGGCATGTGGGCCAAATT‑CGCCATCCACT‑CATTAAAGAAAGCAAAAATCGAAAGTTGTACACACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATACCTATCCAGCa > 2:2641891/1‑149 (MQ=255) ttAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACCAACATAATATTCCTTTTCAAACG‑CTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCAc > 2:5422461/1‑149 (MQ=255) tAGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTCGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACt > 1:4221482/1‑149 (MQ=255) aGGCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTc > 1:754135/1‑149 (MQ=255) ggCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGCATACATAAATATCTCTATCAAGCACTCg > 1:2340947/1‑149 (MQ=255) gCATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGt > 2:8107065/1‑149 (MQ=255) cATCTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGtt < 2:1748887/149‑1 (MQ=255) tCTGGGCAACATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCa > 1:4758451/1‑149 (MQ=255) cTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCaa > 1:4064964/1‑149 (MQ=255) cTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCaa > 1:7267856/1‑149 (MQ=255) cTGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCaa < 2:3155267/149‑1 (MQ=255) tGGGCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAATTTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAAt < 2:5779131/149‑1 (MQ=255) gggCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAAtt > 2:8003175/1‑149 (MQ=255) gggCAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAAtt > 1:3506970/1‑149 (MQ=255) cAAAATT‑CGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTa > 1:6130712/1‑149 (MQ=255) cGCCATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACaaa < 1:831280/149‑1 (MQ=255) cATCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAg > 2:5589931/1‑149 (MQ=255) aTCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAgg < 2:3893099/149‑1 (MQ=255) tCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATTATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGa < 1:1375814/149‑1 (MQ=255) tCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGa < 1:3381081/149‑1 (MQ=255) tCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGa < 1:8749160/149‑1 (MQ=255) tCCACT‑CATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGa > 2:4441262/1‑149 (MQ=255) aGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAat > 1:8942663/1‑149 (MQ=255) aGAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTATACAACAAAAAGGACTTTTTGACAat < 2:7828286/149‑1 (MQ=255) gAAACCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAata > 2:3982042/1‑149 (MQ=255) aaaaCCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTACCAAGCACTCGTTCAAAAATAAAACAAAAAGGACTTTTTGACAata < 2:7086629/148‑1 (MQ=255) aaaaCAAAAATCTAAAGTTGTACAAACATAATATTCCGTAACAAAAG‑TTAAAAATTCGTACAGTAGTTCTGTTTACTTAAATAGAACACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAatat < 2:886582/149‑1 (MQ=255) aaaCCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTGCTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAatat < 1:5598771/149‑1 (MQ=255) aaaCCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAatat > 2:2298413/1‑149 (MQ=255) aaCCAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAAtata < 1:2707721/149‑1 (MQ=255) ccAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAATATaaa < 1:3892931/149‑1 (MQ=255) ccAAAAATCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAATATaaa > 1:8516564/1‑149 (MQ=255) aaTCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAATATAAACtttc > 2:1921317/1‑148 (MQ=255) aaTCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAATATAAACtttc > 2:7510050/1‑148 (MQ=255) aTCGAAAGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAATATAAACtttct > 1:912423/1‑147 (MQ=255) aGTTGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAATATAAAC‑TTTCTTATAtt > 1:2151304/1‑149 (MQ=255) ttGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCATTTTTACAACAAAAAGGACTTTTTGACAATATAAAC‑TTTCTTATAtttt < 1:5008901/149‑1 (MQ=255) ttGTACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTCACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAATATAAAC‑TTTCTTATAtttt > 2:6216406/1‑149 (MQ=255) tGTACAAACATAATATTCCTTGTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAATATAAAC‑TTTCTTATATTTTa < 1:973138/149‑1 (MQ=255) tACAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAATATAAAC‑TTTCTTATATTTTAtc < 2:59655/149‑2 (MQ=255) cAAACATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAATATAAAC‑TTTCTTATATTTTAtcag < 1:4620344/149‑4 (MQ=255) aaaCATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAATATAAAC‑TTTCTTATATTTTAtcaga < 1:3192103/149‑5 (MQ=255) aaCATAATATTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACtt > 2:2079403/1‑114 (MQ=255) aataTTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAATATAAAC‑TTTCTTATATTTTA‑TCA‑GAGAActc > 2:8263651/1‑149 (MQ=255) aataTTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAATATAAAC‑TTTCTTATATTTTA‑TCA‑GAGAActc > 2:2760005/1‑149 (MQ=255) atatTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAATATAAAC‑TTTCTTATATTTTA‑TCA‑GAGAActct > 1:1713325/1‑149 (MQ=255) tatTCCTTTTCAAAAG‑TTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATGTTACAACAAAAAGGACTTTTTGACAATATAAAC‑TTTCTTATATTTTA‑TCA‑GAGAActctc < 1:5403773/149‑2 (MQ=255) | AAAGGGGAAAATTACTAAACCTGTTTCAATAAAGATAATCGCTCCTAAAACAACATAAATCCAAATGTTGACCATTAGGCATCTGGGCAAAATTCCGCCATCCACTCCATTAAAGAAACCAAAAATCGAAAGTTGTACAAACATAATATCCCTTTTCAAAAGTTTAAAAATTCTTACAGTAGTTCTGTTTACTTAAATAGAATACATAAATATCTCTATCAAGCACTCGTTCAATTTTACAACAAAAAGGACTTTTTGACAATATAAACTTTTCTTATATTTTATTCAGGAGAACTCTT > AM406671/1921367‑1921665 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |