| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 617,310 | A→C | S8S (TCA→TCC) | llmg_0628 → | divalent cation transport‑related protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 617,310 | 0 | A | C | 96.2% | 3986.4 / ‑2.2 | 1081 | S8S (TCA→TCC) | llmg_0628 | divalent cation transport‑related protein |
| Reads supporting (aligned to +/- strand): ref base A (2/39); new base C (591/440); total (602/479) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.61e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 1090 total aligned reads displayed.
CTTTTCGTTAAGGCTTTGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCAAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGACTATGAAAATG > AM406671/617164‑617455 | cTTTTCGTTAAGGCTTTGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCcaa < 2:696931/149‑1 (MQ=255) cGTTAAGGCTTTGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGaaa < 2:158421/149‑1 (MQ=255) cGTTAAGGCTTTGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGAAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATTAACAATaaaaaaaaa < 2:2001039/149‑6 (MQ=255) gTTAAGGCTTTGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGaaaa < 1:5955143/149‑1 (MQ=255) aaGGCTTTGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGAGATAGATAGGCTGATATGATAAAAAATTATAAACTAACCAATGaaaaaaa < 2:240702/149‑1 (MQ=255) aaGGCTTTAAAAAAAAAAAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGAAGAAAAAAAGGATTTAAAGCCTTTTTTATTAGGAAAAGAAGGGATAAATAGGCTGATATGATAAAAAATTATGAACTAaaaaaaaaaaaaaa < 2:8316472/149‑1 (MQ=255) aGGCTTTGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGaaaaaaaa > 1:7468469/1‑149 (MQ=255) ggCTTTGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGTATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAAt < 1:94382/149‑1 (MQ=255) gCTTTGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAAtt > 1:5039418/1‑149 (MQ=255) gCTTTGAAATAAAAAAATGAGATAAAAATAGGAAAATCTGCTACAAATAGAAGGAGAAGAAGAGGAGTTAAATCCCTTTTTATTAGGAAAAGAAGGGATAGACAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAAtt < 1:5235031/149‑1 (MQ=255) tttGAAATAAAATAAAGAGAAAAAAATAGGAAAATCTGCTACAATAAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGa < 1:884272/149‑1 (MQ=255) ttGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGAt < 2:4874357/149‑1 (MQ=255) ataaaaaaaAGAAAAAAAAATAGGAAAATATGCTACAATTAAAAGGAGAAGAAGAGGATTTAAAACCTTTTTTATGAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATAAAATATAAAAAAAAAAAAAATTGATCTCaa < 2:3458175/149‑1 (MQ=255) taaaataaTGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACCATCCAATGAAAAAAAATTGATCTTAAc > 2:8504567/1‑149 (MQ=255) aaaaataaTGAGAAAAAAATAGGAAACTCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAANTATCCAATGAAAAAAAATTGATCTCAAc < 1:5123631/148‑1 (MQ=255) aaaataaTGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACt > 2:8060730/1‑149 (MQ=255) aataatGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTc > 2:1480288/1‑149 (MQ=255) ataatGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCt > 1:1535178/1‑149 (MQ=255) gagaAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGAt > 1:7987808/1‑149 (MQ=255) gagaAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCAGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGAt < 2:764617/149‑1 (MQ=255) gaAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATga < 1:1850456/149‑1 (MQ=255) aaaaaaaTAGGAAAATCTGCTACAATTAGAAGGAAAAGAAAAGAATTTAAATCATTTTTTATTAAAAAAAGAAGGAATAAATAGGCTTATATGATAAAAAATTATTAACTATCCAATTAAAAAAAATTGATCTCAACTTCTGATATtaa < 2:8773744/149‑1 (MQ=255) aaaaaTAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATgaaga > 1:7652831/1‑149 (MQ=255) aaaaTAGGAAAATCTGCTACAAATAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGTAGATATAGGCTGATATGATAAAAAATTATGACCGATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATgaagaa < 1:3935666/149‑1 (MQ=255) aaTAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAAtt > 2:5533720/1‑149 (MQ=255) aTAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTATGTATAGAAGGGATAGATAGGCTGATATGATATAAAATTATTAACTATCCAATGAAAAAAAATTGATCTCAACTTTTTAGATGAAGAAttt > 2:1172906/1‑149 (MQ=255) aTAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAACTTGATCTCAACTTCTGAGATGAAGAAttt > 1:853028/1‑149 (MQ=255) aTAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAAttt > 2:6259357/1‑149 (MQ=255) aTAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAAttt > 2:6535161/1‑149 (MQ=255) tAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTc < 2:6862413/149‑1 (MQ=255) gAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACt < 1:1003300/149‑1 (MQ=255) aaTCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTTTTATGTAAAGAAGGGATAGATAGGCTGATATGATAAAACATTATGAAGTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTACACTTAt > 2:3383476/1‑149 (MQ=255) aTCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATg > 1:4091730/1‑149 (MQ=255) tCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTGTTTTTTTTTTAAGGGATAGATAGGCTGATATGATAAAAAATTTTGATCTATCCAATGAAAAAAAATTTATCTCAACTTCTGATATGAAGAATTTTACTTATGt > 2:6634282/1‑149 (MQ=255) tCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGt > 1:1224119/1‑149 (MQ=255) tCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGt < 1:7814597/149‑1 (MQ=255) tGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGATAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTcc > 2:8997188/1‑149 (MQ=255) aaTTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATc < 1:6852058/149‑1 (MQ=255) gAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAaca > 1:629868/1‑149 (MQ=255) gggaaatgaagaGGTTTTAAATGCTTTGTTATGAGTAAAAGAAGGGATAGATAGGATGATATGATAAAAAATTATGAACTATCCATTGAAAAAAAATTGATCTCAGCTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACg < 2:1687741/142‑1 (MQ=255) aGGAGAAGAAGAGGATTTAAATCCTTTTTTTTTTTTTTTATAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAACTTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCTTCAATTCAACACg > 2:2802168/1‑149 (MQ=255) aGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACg > 1:4695153/1‑149 (MQ=255) ggAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAACAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGt < 1:2816259/149‑1 (MQ=255) ggAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGt > 1:3650887/1‑149 (MQ=255) agaagaagaGGATTTAAATCCTTTTTTATTAGGAAAAGAAAGGATAGATAGACTGATATGATAAAAAATTATGAAAAAAAAAAAAAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTga < 2:818737/149‑1 (MQ=255) aagaagaGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTACTCAATCCAACACGTgaag > 1:4525964/1‑149 (MQ=255) aaagaGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGAATAGATAGACTGATATAATAAAAAATTATGAACAAAAAAAAAAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTgaagaa < 2:9181526/148‑1 (MQ=255) aagaaaaTTTAAATCCTTTTTTAATAAGAAAAGAAGAGATAGATATGCTGACATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACCTGAAGaaa < 2:74965/143‑1 (MQ=255) aagaGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATATATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGaaa < 2:4089361/149‑1 (MQ=255) agagGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATGAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACt < 1:5531956/120‑1 (MQ=255) agGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTg < 1:3757125/149‑1 (MQ=255) gATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTggg > 1:141046/1‑149 (MQ=255) gATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTggg > 2:7806282/1‑149 (MQ=255) aaaTCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAatat > 1:3463887/1‑149 (MQ=255) aaaTCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAatat < 1:240574/149‑1 (MQ=255) aaTCCTTTTTTTTTTGGTAAAGAAGGGATAGATAGGCTGATATGATAAAATATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTTGGAATAtc > 2:5697694/1‑149 (MQ=255) aaTCCTTTATTATTAGCAAAAGACCGGATAGCTCGTCCTATTTGCTATAAATTTATAAACTCTCCAATGAAAAAAAATTCATCTCAACTTCTGAGATGAAAAATTTCACTTACGTCCTCAATCCAACACGTGAAGAAAGTAGTAatatt > 2:5236109/1‑148 (MQ=255) aTCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATAtct < 1:6212325/149‑1 (MQ=255) aTCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACGATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATAtcc > 2:1367761/1‑148 (MQ=255) tCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATAtctc > 1:6595057/1‑149 (MQ=255) cTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAg < 1:8305638/149‑1 (MQ=255) cTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAg > 2:2152970/1‑149 (MQ=255) tttttATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGaa > 2:5424887/1‑149 (MQ=255) ttttATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAac < 2:3254814/149‑1 (MQ=255) tttATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAaca < 1:2687168/149‑1 (MQ=255) tttATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAaca > 1:3180802/1‑149 (MQ=255) ttattaGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAacac < 2:5859977/149‑1 (MQ=255) attaGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTa > 1:5837871/1‑149 (MQ=255) ttaGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTAt > 1:6085770/1‑149 (MQ=255) ggAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGAt < 1:2130783/149‑1 (MQ=255) ggAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGAt > 2:4323216/1‑149 (MQ=255) aagaagGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTc < 2:3071438/149‑1 (MQ=255) aagaagGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTc > 1:3274118/1‑149 (MQ=255) agaagGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTcc > 1:7083038/1‑149 (MQ=255) agGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCttt > 1:5330174/1‑149 (MQ=255) gatagGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGActat < 1:7315692/149‑1 (MQ=255) atagGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGActatc < 1:1996789/149‑1 (MQ=255) tagGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGActatct < 2:4688298/149‑1 (MQ=255) cTGATATGATAAAAAATTATGAACTCTCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTatctatct > 2:5017111/1‑149 (MQ=255) gatatgataAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTgg < 1:4298132/149‑1 (MQ=255) atatgataAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGa > 2:2718386/1‑149 (MQ=255) atgataAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGa < 2:2238810/147‑1 (MQ=255) tgataAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAAtt < 2:455536/149‑1 (MQ=255) gataAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAAttt > 1:4809266/1‑149 (MQ=255) gataAAAAATTATGAACTAACCAAAGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAAttt < 2:7160372/149‑1 (MQ=255) taAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTa < 1:1725290/149‑1 (MQ=255) taAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTa > 2:1801594/1‑149 (MQ=255) taAAAAATTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGAGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTa < 2:1021282/149‑1 (MQ=255) aaaaaaTTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAg < 1:8670476/149‑1 (MQ=255) aaaaaaTTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAg < 1:8130712/149‑1 (MQ=255) aaaaaaTTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAg < 2:3962027/149‑1 (MQ=255) aaaTTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATg > 1:2576733/1‑149 (MQ=255) aTTATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGAc > 1:8388100/1‑149 (MQ=255) tATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGACTa < 2:6057244/149‑1 (MQ=255) tATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGACTa < 2:2514819/149‑1 (MQ=255) tATGAACTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGACTa > 1:9080234/1‑149 (MQ=255) aaCTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGACTATGaa < 2:7360791/149‑1 (MQ=255) aaCTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGACTATGaa > 1:6483886/1‑149 (MQ=255) aaCTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGACTATGaa > 2:3746148/1‑149 (MQ=255) cTATCCAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGACTATGaaaa > 1:2972854/1‑149 (MQ=255) | CTTTTCGTTAAGGCTTTGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCAAATGAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGACTATGAAAATG > AM406671/617164‑617455 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |