| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM406671 | 2,492,912 | G→A | A203V (GCA→GTA) | gapB ← | glyceraldehyde 3‑phosphate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM406671 | 2,492,912 | 0 | G | A | 99.8% | 4495.5 / NA | 1133 | A203V (GCA→GTA) | gapB | glyceraldehyde 3‑phosphate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (567/563); minor base C (0/2); total (568/565) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 1163 total aligned reads displayed.
TATCAAGGATAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTGCAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGCAAGACAGTT > AM406671/2492766‑2493057 | tATCAAGGATAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTaca < 2:8452996/149‑1 (MQ=255)tATCAAGGATAGTAACAAGTTCAGTCAATGAACCAGCTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTGTAGCTGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTaca < 2:6177224/149‑1 (MQ=255) aTCAAGGATAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATATCCTTAAAGCTTACCTTGAAGCTCTGGCAATACCAGACCGATGGCGTTAGCAGCACCTGATGAGTTACGTACGATGTTTTCAGCTacag > 2:3475883/1‑149 (MQ=255) ggATAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGt > 2:3369836/1‑149 (MQ=255) aTAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTgc < 1:1129143/149‑1 (MQ=255) tAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTgcg > 2:1886894/1‑149 (MQ=255) tAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTgcg < 2:7908515/149‑1 (MQ=255) tAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTgcg > 2:7786797/1‑149 (MQ=255) tAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGa > 2:7069544/1‑149 (MQ=255) aCAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACg < 2:8117225/149‑1 (MQ=255) cAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACgg > 2:6909635/1‑149 (MQ=255) aaGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGa > 1:4124657/1‑149 (MQ=255) aGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGaa > 2:6955726/1‑149 (MQ=255) aGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGaa > 1:8076267/1‑149 (MQ=255) gTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGaaa > 2:8597580/1‑149 (MQ=255) gTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGaaa < 1:7386547/149‑1 (MQ=255) cAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAAtct > 1:3573112/1‑149 (MQ=255) aGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAAtctc > 1:2212454/1‑149 (MQ=255) tCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTcca > 1:1316800/1‑149 (MQ=255) aTGAACCAGTTGGAACTGTTACACGGTGAGCATCTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCTACGGAAATCTccacca < 2:4432552/149‑1 (MQ=255) aTGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTccacca > 1:2497008/1‑149 (MQ=255) gAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACg < 1:3900201/149‑1 (MQ=255) ccAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGgtg > 1:3355521/1‑149 (MQ=255) cAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGgtgt < 1:8265994/149‑1 (MQ=255) aGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGtgtg > 1:5791096/1‑149 (MQ=255) ttGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTggg < 2:2485910/149‑1 (MQ=255) ttGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTggg < 2:2053732/149‑1 (MQ=255) ggAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGcc < 2:54122/149‑1 (MQ=255) gAACTGGTACACGTTTGGCATGTCCGTGAAGTTTGCCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCGCCGGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCa < 2:4968839/149‑1 (MQ=255) gAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCa > 1:7142024/1‑149 (MQ=255) aaCTGGTACACGTTGAGCATGTCCTTGACGTTTACCTTGCAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCAt < 1:6619212/149‑1 (MQ=255) cTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCa > 1:1682946/1‑149 (MQ=255) cTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCa < 2:3954688/149‑1 (MQ=255) cTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCa < 1:7942599/149‑1 (MQ=255) ggTACACGTTGAGCATGTCCTAGAAGTATACCTTGAAGGTCTCGCAAGACAAGCCCGATGGCTTTAGCATCACCTGCTGAGTTAGGTACGATGTTTTCAGCTACAGCCAGTGCGCGACCGAAATCCCCACCACGGTGTGGGCGATCAag > 2:4679692/1‑149 (MQ=255) acacGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGATGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAagagc > 2:7404126/1‑148 (MQ=255) cGTTGAGCATGTCCTTGAAGTTTACCTTGGAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCAt > 2:5679211/1‑149 (MQ=255) ttGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCAttt > 2:1406100/1‑149 (MQ=255) ttGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCAttt > 1:504799/1‑149 (MQ=255) ttGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCAttt > 1:2885419/1‑149 (MQ=255) gCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTcc > 2:6476042/1‑116 (MQ=255) aTGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCAc < 2:4114111/149‑1 (MQ=255) aTGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCAc < 1:8620962/149‑1 (MQ=255) tGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCAcc > 2:2273999/1‑149 (MQ=255) tGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCAcc > 1:1419272/1‑149 (MQ=255) gTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCa < 1:6276754/149‑1 (MQ=255) tCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTGCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAg < 1:4742596/149‑1 (MQ=255) ccTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAgt > 2:376484/1‑149 (MQ=255) ccTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAgt > 1:6439862/1‑149 (MQ=255) ccTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAgt < 2:2586815/149‑1 (MQ=255) tGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGGCATTTGGTCACCAGTGTa > 1:6800290/1‑149 (MQ=255) gAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACTATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTaa < 1:4551798/149‑1 (MQ=255) aaGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAAc > 1:2432054/1‑149 (MQ=255) aGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAAcc < 1:8428391/149‑1 (MQ=255) aGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAAcc < 2:433287/149‑1 (MQ=255) aGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAAcc > 2:4771261/1‑149 (MQ=255) gTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCg > 1:9211045/1‑149 (MQ=255) ttGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTg < 1:3992654/149‑1 (MQ=255) tGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGt < 2:5184909/149‑1 (MQ=255) aaGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCCTCAAGAGTCCTTTGGTCACCCGTGTAACCGTGAACTGTAg > 2:1702915/1‑149 (MQ=255) aaGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAg < 2:2796497/149‑1 (MQ=255) aGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTg < 2:9047576/145‑1 (MQ=255) aGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTg > 1:9047576/1‑145 (MQ=255) aGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAgg > 1:3712165/1‑148 (MQ=255) ttCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCa < 1:2361651/149‑1 (MQ=255) cTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCAtt < 2:6716641/149‑1 (MQ=255) cTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCAtt < 2:8271400/149‑1 (MQ=255) ggCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGCTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGt > 1:5894837/1‑149 (MQ=255) gCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTa < 1:2999600/149‑1 (MQ=255) aaTACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACCGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTAcc < 1:5408871/149‑1 (MQ=255) aCAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAAc > 2:2680720/1‑149 (MQ=255) aCAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAAc < 1:4472886/149‑1 (MQ=255) aGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACttt < 2:7570404/149‑1 (MQ=255) aGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACttt > 1:422578/1‑149 (MQ=255) gACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTg > 1:7006123/1‑149 (MQ=255) gACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTg > 2:4848630/1‑149 (MQ=255) aCCGATGCCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTGTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGa < 1:7244619/149‑1 (MQ=255) ccGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGAt < 2:1586906/149‑1 (MQ=255) cGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATa < 1:5266092/149‑1 (MQ=255) cGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATa < 2:8798405/149‑1 (MQ=255) gATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATAc < 1:1992439/149‑1 (MQ=255) aTGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATAcc > 2:1162097/1‑149 (MQ=255) tGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCg > 1:18424/1‑149 (MQ=255) tGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGCGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATAcag > 2:5869243/1‑147 (MQ=255) cTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAAt < 1:2653708/149‑1 (MQ=255) tttAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAAtt > 2:3112031/1‑149 (MQ=255) tttAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAAtt < 1:4336863/149‑1 (MQ=255) gcaCCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATtgtttgtt > 1:5547255/1‑149 (MQ=255) caCCTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTc > 1:7525264/1‑149 (MQ=255) cTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCaaa < 1:1008994/149‑1 (MQ=255) cTGTTGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCaaa > 2:362135/1‑149 (MQ=255) ttGAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTa < 1:1224736/149‑1 (MQ=255) gAGTTAGGTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATc < 1:3201261/149‑1 (MQ=255) ggTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCAt > 1:6073720/1‑149 (MQ=255) gTACGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCAtt > 1:8778562/1‑149 (MQ=255) cGATGTTTTCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGa > 2:1011468/1‑149 (MQ=255) ttttCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGCAAg > 2:9180421/1‑149 (MQ=255) tCAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGCAAGACa < 1:7782639/149‑1 (MQ=255) cAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGCAAGACAg < 2:5989664/149‑1 (MQ=255) cAGCTACAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGCAAGACAg < 2:3250459/149‑1 (MQ=255) | TATCAAGGATAGTAACAAGTTCAGTCAATGAACCAGTTGGAACTGGTACACGTTGAGCATGTCCTTGAAGTTTACCTTGAAGTTCTGGCAATACAAGACCGATGGCTTTAGCAGCACCTGTTGAGTTAGGTACGATGTTTTCAGCTGCAGCACGTGCGCGACGGAAATCTCCACCACGGTGTGGGCCATCAAGAGTCATTTGGTCACCAGTGTAACCGTGAACTGTAGTCATTGTACCAACTTTGATACCGAATTGTTTGTTCAAAGTATCAGCCATTGGAGCAAGACAGTT > AM406671/2492766‑2493057 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |