| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 634324 = | NA (NA) | 421 (2.840) | 14/64 | 13.2 | 73.9% | noncoding (422/768 nt) | IS1 | repeat region |
| ? | REL606 | 964951 = | 168 (1.000) | coding (630/1431 nt) | ycaM | predicted transporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 899 total aligned reads displayed.
GTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGgctg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/634359‑634324‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTGGTTTTCGCGGTTGGCGGAGCAGAGAAGATTTCTCCT > REL606/964951‑964990 GTGGGGCTATGTCGGGGCTAGATCGCGCCAGCGCTGG < 2:2571208/37‑1GTGGGGCTATGTCGGGGCTAAATCGCGCCCGCGCTGG > 1:1230083/1‑37GTGGGGCTATGTCGGGGCTAAATCGCGCCCGCGCTGG > 1:5986062/1‑37GTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGG > 1:5211164/1‑37GTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGG < 1:3686323/37‑1GTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGG < 2:663645/37‑1GTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGG < 1:9949071/37‑1GTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGG > 2:6972143/1‑37GTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGG > 2:8948160/1‑37GTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGG > 2:4831608/1‑37GTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGG < 1:1861818/37‑1GTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGG > 2:5553761/1‑37GTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGG < 1:8026465/37‑1GTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGG < 1:7705049/37‑1GTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGG < 1:6575679/37‑1 gGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGC < 2:6487896/36‑1 TGGGGCTATGTCGGGGCTAAGTCGCGCCATCGCTGGC < 2:11226230/37‑1 TGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGC < 1:6883818/37‑1 TGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGC < 1:8391202/37‑1 TGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGC < 1:5472509/37‑1 TGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGC < 2:4212452/37‑1 TGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGC > 2:10153101/1‑37 TGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGC > 2:1588862/1‑37 TGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGC < 1:5338844/37‑1 TGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGC < 1:1715107/37‑1 GGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCT > 1:9345803/1‑37 GGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCT < 1:8226531/37‑1 GGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCT < 2:2990299/37‑1 GGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCT < 1:7257454/37‑1 GGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCT > 2:8436897/1‑37 GGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCT < 1:670782/37‑1 GGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCT > 2:5334145/1‑37 GGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCT < 1:6511047/37‑1 GGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCT < 2:8630238/37‑1 GGGGCTATGTCGGGGCTAAATCGCGACAGCGCTGGCT > 2:9674660/1‑37 GGGGCTATGTCGGGGCTAAAGCGCGCCAGCGCTGGCc > 2:618563/1‑36 GGGGCTATGGCGGGGCTAAATCGCGCCAGCTCTGGCT > 1:2473623/1‑37 GGGCTATGTCGGGGCTGAATCGCGCCAGCGCTGGCTG < 2:5071301/37‑1 GGGCTATGTCGGGGCTAAATCGCGCCTGCGCTGGCTG > 1:4497488/1‑37 GGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTG > 2:5919598/1‑37 GGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTG > 1:10948623/1‑37 GGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTG < 2:3621924/37‑1 GGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTG < 2:9304190/37‑1 GGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTG > 1:10812653/1‑37 GGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTG < 2:325296/37‑1 GGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTG < 1:2795369/37‑1 GGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTG > 2:1834477/1‑37 GGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTG > 1:7474765/1‑37 GGCTATGTCGGGGCTAAATCGCGCCCGCGCTGGCTGG > 1:3022079/1‑37 GGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGG > 1:39731/1‑37 GGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGG > 1:21951/1‑37 GGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGG > 1:105627/1‑37 GGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGG > 2:4053490/1‑37 GGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGG > 2:3905010/1‑37 GCTATGTCGGGGCTAAATCGCGCCCGCGCTGGCTGGT > 2:8789529/1‑37 GCTATGTCGGGGCTAAATCGCGCCAGCGCTGGGTGGT > 1:1000768/1‑37 GCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGGg > 1:234843/1‑36 GCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGGg > 1:3861511/1‑36 GCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGGg > 1:4991264/1‑36 GCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGGg > 1:4872409/1‑36 CTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGGTg > 2:4357627/1‑36 CTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGGTT > 2:4552916/1‑37 CTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGGTT > 1:10201801/1‑37 TATGTCGGGGCTAAATCGCGCCCGCGCTGGCTGGGTT > 1:263527/1‑37 TATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGGTTT > 2:2083155/1‑37 TATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGGTTT > 1:2019868/1‑37 TATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGGTTT > 2:10383456/1‑37 TATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGGTTT > 2:2330546/1‑37 TATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGGGTT > 1:3496579/1‑37 TATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGGGTT > 1:4627753/1‑37 TATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGGGTT > 1:9672756/1‑37 TATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGCTTT > 2:7140185/1‑37 TATGTCGGGGCTAAATCGCGCCAGCGCCGGCTGGTTT > 2:6775364/1‑37 TATGTCGGGGCTAAATCGCGCCAGCGATGGCTGCTTT > 2:7827593/1‑37 ATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGGTTTT > 2:7679302/1‑37 ATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGGCTTT > 1:1521573/1‑37 TGTCGGGGCTAAATCGCGCCCGCGCTGGCTGGGTTTC > 1:8926374/1‑37 TGTCGGGGCTAAATCGCGCCAGCGCTGGCTGGTTTTt > 1:3363881/1‑36 TGTCGGGGCTAAATCGCGCCAGCGCTGGCTGGTTTTC > 2:2833017/1‑37 TGTCGGGGCTAAATCGCGCCAGCGCTGGCTGGGTTTt > 1:8769695/1‑36 TGTCGGGGCTAAATCGAGCCAGCGCTGGCTGGTGTTt > 1:9833838/1‑36 GTCGGGGCTAAATCGCGCCAGCGACGGCTGGTTTACG > 2:3478050/1‑37 TCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTTCGC > 2:7540198/1‑37 TCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTTCGC > 2:10967480/1‑37 TCGGGGCTAAATCGCGCCAGCGCTGGCTGGTTTTTGC > 1:7130122/1‑37 TCGGGGCTAAATCGCGCCAGCGCTGGCTGGTTTTCGC > 2:5693770/1‑37 TCGGGGCTAAATCGCGCCAGCGCTGGCTGGTTTTCGC > 2:10738139/1‑37 TCGGGGCTAAATCGCGCCAGCGCTGGCTGGGTTTTGC > 1:6270246/1‑37 TCGGGGCTAAATCGCGCCAGCGCTGGCTGGGTTTCGC > 1:5731288/1‑37 TCGGGGCTAAATCGCGCCAGAGCTGGCTGGGGTTCGC > 1:4302893/1‑37 CGGGGCTAAATCGCGCCAGCGCTGGCTGGTTTTTGCG > 1:4143654/1‑37 CGGGGCTAAATCGCGCCAGCGCTGGCTGGTTTTCGCG > 2:7381850/1‑37 CGGGGCTAAATCGCGCCAGCGCCGGCTGGGTTACGCG > 2:1286283/1‑37 GGGGCTAAATCGCGCCAGCGCTGGCTGGTTTTCTCGG > 1:10367709/1‑37 GGGGCTAAATCGCGCCAGCGCTGGCTGGTTTTCGCGt > 1:8534787/1‑36 GGGCTAAATCGCGCCAGCGCTGGCTGGTTTTTGCGGc > 1:11111861/1‑36 GGGCTAAATCGCGCCAGCGCTGGCTGGGGTTCGCGGc > 1:9103836/1‑36 GGCTAAATCGCGCCAGCGCTGGCTGGTTTTCGCCGTT > 1:9467180/1‑37 GCTAAATCGCGCCAGCGCTGGCTGGTTTTCGCGGATG > 1:3230177/1‑37 GCTGGTTTTCGCGGTTGGCGGAGCAGAGAAGATTTCT > 2:8163135/1‑37 GTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGgctg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/634359‑634324‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTGGTTTTCGCGGTTGGCGGAGCAGAGAAGATTTCTCCT > REL606/964951‑964990 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |