| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 1454381 = | 85 (0.510) | 15 (0.120) | 9/56 | 14.6 | 13.9% | coding (1933/3846 nt) | hrpA | ATP‑dependent helicase |
| ? | REL606 | 3944634 = | 121 (0.940) | intergenic (+23/‑124) | proM/aslB | tRNA‑Pro/predicted regulator of arylsulfatase activity | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGGCTGGTTTCTACCAGTTCCGCCACCATTACCCATTTCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1454424‑1454381‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcggcggGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCCCT > REL606/3944634‑3944669 CGGCTGGTTTCTACCAGTTCCGCCACCATTACCCATT < 1:8712221/37‑1CGGCTGGTTTCTACCAGTTCCGCCACCATTACCCATT > 2:3345180/1‑37 GGCTGGTTTCTACCAGTTCCGCCACCATTACCCATTT > 2:8597524/1‑37 GGCTGGTTTCTACCAGTTCCGCCACCATTACCCATTT < 1:9011315/37‑1 GGCTGGTTTCTACCAGTTCCGCCACCATTACCCATTT > 2:4102005/1‑37 GCTGGTTTCTCCCAGTTCCGCCACCATTACCCATTTC < 1:6099670/37‑1 GCTGGTTTCTACCAGTTCCGCCACCATTACCCATTTC < 1:3433300/37‑1 GCTGGTTTCTACCAGTTCCGCCACCATTACCCATTTC < 1:6196643/37‑1 GCTGGTTTCTACCAGTTCCGCCACCATTACCCATTTC > 1:8746452/1‑37 GCTGGTTTCTACCAGTTCCGCCACCATTACCCATTTC > 2:10176554/1‑37 GCTGGTTTCTACCAGTTCCGCCACCATTACCCATTTC < 2:2267286/37‑1 GCTGGTTTCTACCAGTTCCGCCACCATTACCCATTTC > 1:10534289/1‑37 tTGGTTTCTACCAGTTCCTCCACCATTCCCCCTTTCG < 1:1516447/36‑1 CTGGTTTCTACCAGTTCCGCCACCATTACCCATTTCG < 1:5773324/37‑1 CTGGTTTCTACCAGTTCCGCCACCATTACCCATTTCG < 1:5778850/37‑1 CTGGTTTCTACCAGTTCCGCCACCATTACCCATTTCG < 1:5874649/37‑1 CTGGTTTCTACCAGTTCCGCCACCATTACCCATTTCG > 2:9051495/1‑37 TGGTTTCTACCAGTTCCGCCACCATTACCCATTTCGG > 2:2746343/1‑37 TGGTTTCTACCAGTTCCGCCACCATTACCCATTTCGG > 1:8948404/1‑37 TGGTTTCTACCAGTTCCGCCACCATTACCCATTTCGG > 1:1498636/1‑37 TGGTTTCTACCAGTTCCGCCACCATTACCCATTTCGG > 1:6730368/1‑37 TGGTTTCTACCAGTTCCGCCACAAGTACCCATTTCGG > 2:11232970/1‑37 TGGTTGCTACCAGTTCCGCCACCATTACCCATTTCGG < 1:2502235/37‑1 GGTTTCTACCAGTTCCGCCACCATTACCCATTTCGGC > 2:3971398/1‑37 GGTTTCTACCAGTTCCGCCACCATTACCCATTTCGGC > 2:11092204/1‑37 GGTTTCTACCAGTTCCGCCACCATTACCCATTTCGGC < 2:5430122/37‑1 GGTTTCTACCAGTTCCGCCACCATTACCCATTTCGGC < 1:5598742/37‑1 GGTTTCTACCAGTTCCGCCACCATTACCCATTTCGGC < 1:3076423/37‑1 GTTTCTACCAGTTCCGCCACCATTGCCCATTTCGGCG > 2:3566717/1‑37 GTTTCTACCAGTTCCGCCACCATTACCCATTTCGGCG < 1:3830660/37‑1 GTTTCTACCAGTTCCGCCACAATTACCGATTTCGGCG > 2:4172372/1‑37 TTTCTACCAGTTCCGCCACCATTACCCATTTCGGCGG < 1:2675976/37‑1 TTTCTACCAGTTCCGCCACCATTACCCATTTCGGCGG < 2:7347075/37‑1 TTCTACCAGTTCCGCCACCATTACCCATTTCGGCGGG > 2:8574496/1‑37 TCTACCAGTTCCGCCACCATTACCCATTTCGGCGGGG > 1:8470111/1‑37 TCTACCAGTTCCGCAACCATTACCCATTTCGGCGGGG > 1:7934485/1‑37 ACCAGTTCCGCCACCATTACCCATTTCGGCGGGGTTT > 1:10205573/1‑37 ACCAGTTCCGCCACCATTACCCATTTCGGCGGGGGTT > 1:6377384/1‑37 CCAGTTCCGCCACCATTACCCATTTCGGCGGGGTTTT > 2:9655313/1‑37 CAGTTCCGCCACCATTACCCATTTCGGCGGGGTTTTT > 1:4155815/1‑37 CAGTTCCGCCACCATTACCCATTTCGGCGGGGTTTTT > 2:6660612/1‑37 AGTTCCGCCACCATTGCCCATTTCGGCGGGTTTTTTT > 2:4537296/1‑37 AGTTCCGCCACCATTACCCATTTCGGCGGGTATTTTT > 2:3737792/1‑37 AGTTCCGCCACCATTACCCATTTCGGCGGGGTTTTTT > 2:7050583/1‑37 GTTCCGCCACCATTACCCATTTCGGC‑GGGTTTTTTGT > 2:8541648/1‑37 TCCGCCACCATTACCCATTTCGGCGGGGGTTTTTTTT > 1:7548474/1‑37 CCGCCACCATTACCCATTTCGGCGGGGTTTTTTTTTa > 2:4460914/1‑36 CCGCCACCATTACCCATTTCGGCGGGGTGTTTTGATT > 1:780106/1‑37 TTCGGCGGGTTTTTTTGTTTTCTGTGCATTTCGTCAC < 1:4965986/37‑1 TTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCAC > 2:10824604/1‑37 TTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCAC > 2:8949593/1‑37 TCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACT < 2:5427624/37‑1 TCGGCGGGGTTTTTTGTTTTCCGTGCATTTCGTCACT > 2:9151833/1‑37 CGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTT > 2:2010984/1‑37 CGGCGGGGGTTTTTGTTTTCTGTGCATTTCGTCACTT > 2:7656872/1‑37 CGGCGGGGGTTTTTGTTTTCTGTGCATTTCGTCACTT > 1:4273612/1‑37 GGCGGGGTTTTTTGTTTTCTGTGCATTTGGTCACTTT > 2:9923822/1‑37 GGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTT < 1:2280587/37‑1 GGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTT < 2:9631328/37‑1 GGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTT > 2:6309228/1‑37 GGCGGGGTTTTTTGTTTTCTGTGCATTTCCTCACTTT > 2:6472884/1‑37 GCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTC < 2:3786682/37‑1 GCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTC < 1:163073/37‑1 GCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTC > 2:5830707/1‑37 GCGGGGTTTTTTGTGTTCTGTGCATTTCGTCACTTTC > 1:140886/1‑37 CGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCC > 2:8990536/1‑37 CGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCC > 2:8023719/1‑37 CGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCC < 1:9278111/37‑1 CGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCC > 1:1211696/1‑37 CGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCC < 1:5482257/37‑1 CGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCC < 1:2715583/37‑1 CGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCC > 2:3536006/1‑37 CGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCC > 1:7506667/1‑37 GGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCCC > 2:11201377/1‑37 GGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCCC < 2:8972162/37‑1 GGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCCC > 1:4301892/1‑37 GGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCCC > 1:9872219/1‑37 GGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCCC < 2:10091084/37‑1 GGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCCC > 2:10928343/1‑37 GGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCCC > 2:5978602/1‑37 GGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCCC > 2:5543044/1‑37 GGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCCC > 2:5243452/1‑37 GGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCCC > 2:5026044/1‑37 GGGGTNTTTTGTTTTCTGTGCATTTCGTCACTTTCCC > 2:10678759/1‑37 GGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCCCT > 2:10108799/1‑37 GGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCCCT < 2:653888/37‑1 GGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCCCT < 2:2123677/37‑1 GGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCCCT > 2:2390187/1‑37 GGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCCCT < 2:9729235/37‑1 GGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCCCT < 1:2605912/37‑1 CGGCTGGTTTCTACCAGTTCCGCCACCATTACCCATTTCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1454424‑1454381‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcggcggGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCCCT > REL606/3944634‑3944669 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |