| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 1636386 = | 156 (0.930) | 20 (0.140) | 10/62 | 15.2 | 14.8% | coding (1123/2427 nt) | ynfE | oxidoreductase subunit |
| ? | REL606 | 1678338 = | 97 (0.680) | coding (188/1173 nt) | malY | bifunctional beta‑cystathionase, PLP‑dependent/ regulator of maltose regulon | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 157 total aligned reads displayed.
GAAATTGGCACAGCAAAACCCGCTTATACCTGCCAGGGCTGGGGGCCAAAACGCCAGGCAAACGGCGAGCTGA > REL606/1636350‑1636422 | gAAATTGGCACATCAAAACCCGCTTATACCTGCCAgg < 1:11186160/37‑1 (MQ=255)gAAATTGGCACAGCAAAACCCGCTTATACCTGCCAgg < 1:10796805/37‑1 (MQ=255)gAAATTGGCACAGCAAAACCCGCTTATACCTGCCAgg > 2:1964881/1‑37 (MQ=255)gAAATTGGCACAGCAAAACCCGCTTATACCTGCCAgg < 2:5034492/37‑1 (MQ=255) aaaTTGGCACAGCAAAACCCGCTTATTCCTGCCAggg < 2:11171755/37‑1 (MQ=255) aaaTTGGCACAGCAAAACCCGCTTATACCTGCCAggg > 1:8494019/1‑37 (MQ=255) aaaTTGGCACAGCAAAACCCGCTTATACCTGCCAggg > 2:11110401/1‑37 (MQ=255) aaaTTGGCACAGCAAAACCCGCTTATACCTGCCAggg < 2:5509502/37‑1 (MQ=255) aaTTGGCACAGCAAAACCCGCTTATACCTGCCAGGGc < 2:53109/37‑1 (MQ=255) aaTTGGCACAGCAAAACCCGCTTATACCTGCCAGGGc < 1:8776874/37‑1 (MQ=255) aaTTGGCACAGCAAAACCCGCTTATACCTGCCAGGGc < 2:6237972/37‑1 (MQ=255) aaTTGGCACAGCAAAACCCGCTTATACCTGCCAGGGc > 2:649153/1‑37 (MQ=255) aaTTGGCACAGCAAAACCCGCTTATACCTGCCAGGGc > 1:4692012/1‑37 (MQ=255) aaTTGGAAAAGCAAAACCCGCTTATACCTGCCAGGGc > 1:8823474/1‑37 (MQ=37) aTTGGCACAGCAAAACCCGCGTATACCTGCCAGGGCt > 2:8496558/1‑37 (MQ=255) aTTCGCACAGCAAAACCCGCTTATACCTGCCAGGGCt > 2:1124377/1‑37 (MQ=255) ttGGCACAGCAAACCCCGCTTATACCTGCCAGGGCTg < 1:5531670/37‑1 (MQ=255) ttGGCACAGCAAAACCCGCTTATACCTGCCAGGGCTg < 2:3380933/37‑1 (MQ=255) ttGGCACAGCAAAACCCGCTTATACCTGCCAGGGCTg < 2:5195963/37‑1 (MQ=255) ggCACAGCAAAACCCGCTTATACCTGCCAGGGCTggg > 1:4913007/1‑37 (MQ=255) ggCACAGCAAAACCCGCTTATACCTGCCAGGGCTggg < 1:7565171/37‑1 (MQ=255) gCACAGCAAAACCCGCTTATACCTGCCAGGGCTgggg < 2:4795399/37‑1 (MQ=255) gCACAGCAAAACCCGCTTATACCTGCCAGGGCTgggg > 1:4284657/1‑37 (MQ=255) gCACAGCAAAACCCGCTTATACCTGCCAGGGCTgggg > 1:4142154/1‑37 (MQ=255) gCACAGCAAAACCCGCTTATACCTGCCAGGGCTgggg > 1:5643173/1‑37 (MQ=255) gCACAGCAAAACCCGCTTATACCTGCCAGGGCTgggg < 2:8225156/37‑1 (MQ=255) cacaGCAAAACCCGCTTATACCTGCCAGGGCTggggg < 2:7599349/37‑1 (MQ=255) acaGCAAAACCCGCTTATACCTGCCAGGGCTGGGGGc > 1:8854378/1‑37 (MQ=255) caGCAAAACCCGCTTATACCTGCCATGGCTGGGGGcc < 2:6115991/37‑1 (MQ=255) caGCAAAACCCGCTTATACCTGCCAGGGCTGGGGGcc < 1:10381043/37‑1 (MQ=255) caGCAAAACCCGCTTATACCTGCCAGGGCTGGGGGcc > 1:8647746/1‑37 (MQ=255) aGCAAAACCCGCTTATACCTGCCAGGGCTGGGGGCCa > 2:782346/1‑37 (MQ=255) aGCAAAACCCGCTTATACCTGCCAGGGCTGGGGGCCa > 1:6995803/1‑37 (MQ=255) aGCAAAACCCGCTTATACCTGCCAGGGCTGGGGGCCa > 1:8437474/1‑37 (MQ=255) aGCAAAACCCGCTAATACCTGCCAGGGCTGGGGTcct < 2:3492723/37‑2 (MQ=37) gCAAAACCCGCTTATACCTGCCAGGGCTGGGGGCCaa > 1:9855875/1‑37 (MQ=255) gCAAAACCCGCTTATACCTGCCAGGGCTGGGGGCCaa < 1:8359584/37‑1 (MQ=255) gCAAAACCCGCTTATACCTGCCAGGGCTGGGGGCCaa > 1:7894070/1‑37 (MQ=255) gCAAAACCCGCTTATACCTGCCAGGGCTGGGGGCCaa < 1:7652058/37‑1 (MQ=255) cAAAACCCGCTTATACCTGCCAGGGCTGGGGGCCaaa > 2:10117342/1‑37 (MQ=255) cAAAACCCGCTTATACCTGCCAGGGCTGGGGGCCaaa > 2:6184830/1‑37 (MQ=255) cAAAACCCGCTTATACCTGCCAGGGCTGGGGGCCaaa > 2:4023609/1‑37 (MQ=255) aaaaCCCGCTTATACCTGCCAGGGCTGGGGGCCaaaa > 2:2220048/1‑37 (MQ=255) aaaaCCCGCTTATACCTGCCAGGGCTGGGGGCCaaaa > 1:9719515/1‑37 (MQ=255) aaaCCCGCTTATACCTGCCAGGGCTGGGGGCCAAAAc < 1:6161314/37‑1 (MQ=255) aaCCCGCTTATACCTGCCAGGGCTGGGGGCCAAAACg < 2:2684620/37‑1 (MQ=255) aaCCCGCTTATACCTGCCAGGGCTGGGGGCCAAAACg > 2:7180871/1‑37 (MQ=255) aCCCGCTTATACCTGCCAGGGCTGGGGGCCAAAACGc > 2:10344325/1‑37 (MQ=255) aCCCGCTTATACCTGCCAGGGCTGGGGGCCAAAACGc > 2:1648912/1‑37 (MQ=255) cccGCTTATACCTGCCAGGGCTGGGGGCCAAAACGcc > 1:4915068/1‑37 (MQ=255) cccGCTTATACCTGCCAGGGCTGGGGGCCAAAACGcc > 2:1070967/1‑37 (MQ=255) cccGCTTATACCTGCCAGGGCTGGGGGCCAAAACGcc > 2:8696338/1‑37 (MQ=255) ccGCTTATACCTGGCAGGGCTGGGGGCCAAAACGCCa < 1:10919038/37‑1 (MQ=255) ccGCTTATACCTGCCAGGGCTGGGGGCCAAAACGCCa > 1:10189623/1‑37 (MQ=255) ccGCTTATACCTGCCAGGGCCGGGGGCCAAAACGCCa > 2:7795951/1‑37 (MQ=255) cGCTTATACCTGCCAGGGCTGGGGGCCAAAACGCCAg < 1:1256760/37‑1 (MQ=255) cGCTTATACCTGCCAGGGCTGGGGGCCAAAACGCCAg < 1:1420541/37‑1 (MQ=255) cGCTTATACCTGCCAGGGCTGGGGGCCAAAACGCCAg > 2:4963321/1‑37 (MQ=255) gCTTATACCTGCCAGGGCTGGGGGCCAAAACGCCAgg > 2:8983885/1‑37 (MQ=255) cTTATACCTGCCAGGGCTGGGGGCCAAAACGCCAGGc > 2:7554373/1‑37 (MQ=255) cTTATACCTGCCAGGGCTGGGGGCCAAAACGCCAGGc > 1:5631428/1‑37 (MQ=255) ttATACCTGCCAGGGCTGGGGGCCAAAACGCCAGGCa > 1:4413820/1‑37 (MQ=255) ttATACCTGCCAGGGCTGGGGGCCAAAACGCCAGGCa > 2:3798957/1‑37 (MQ=255) tataCCTGCCAGGGCTGGGGGCCAAAACGCCAGGCaa > 2:11285887/1‑37 (MQ=255) tataCCTGCCAGGGCTGGGGGCCAAAACGCCAGGCaa > 1:9730341/1‑37 (MQ=255) ataCCTGCCAGGGCTGGGGGCCAAAACGCCAGGCaaa > 2:8287392/1‑37 (MQ=255) ataCCTGCCAGGGCTGGGGGCCAAAACGCCAGGCaaa > 1:9517962/1‑37 (MQ=255) ataCCTGCCAGGGCTGGGGGCCAAAACGCCAGGCaaa < 2:4624293/37‑1 (MQ=255) taCCTGCCAGGGCTGGGGGCCACAACGCCAGGCAAAc < 2:214526/37‑1 (MQ=255) aCCTGCCAGGGCTGGGGGCCAAAACGCCAGGCAAACg < 2:3429300/37‑1 (MQ=255) aCCTGCCAGGGCTGGGGGCCAAAACGCCAGGCAAACg > 1:4090060/1‑37 (MQ=255) aCCTGCCAGGGCTGGGGGCCAAAACGCCAGGCAAACg > 1:7750512/1‑37 (MQ=255) aCCTGCCAGGGCTGGGGGCCAAAACGCCAGGCAAACg > 1:2422585/1‑37 (MQ=255) aCCTGCCAGGGCTGGGGGCCAAAACGCCAGGCAAACg < 2:6943182/37‑1 (MQ=255) aCCTGCCAGGGCTGGGGGCCAAAACGCCAGGCAAACg > 2:2391282/1‑37 (MQ=255) aCCTGCCAGGGCTGGGGGCCAAAACGCCAGGCAAACg > 2:8727124/1‑37 (MQ=255) ccTGCCAGGGCTGGGGGCCAAAACGCCAGGCAAACgg < 2:11187842/37‑1 (MQ=255) ccTGCCAGGGCTGGGGGCCAAAACGCCAGGCAAACgg > 2:3487456/1‑37 (MQ=255) ccTGCCAGGGCTGGGGGCCAAAACGCCAGGCAAACgg > 2:5131170/1‑37 (MQ=255) ccTGCCAGGGCTGGGGGCCAAAACGCCAGGCAAACgg > 2:10298610/1‑37 (MQ=255) cTGCCAGGGCTGGGGGCCAAAACGCCAGGCAAACGGc > 2:6764538/1‑37 (MQ=255) tGCCAGGGCTGGGGGCCAAAACGCCAGGCAAACGGCg > 1:9908027/1‑37 (MQ=255) tGCCAGGGCTGGGGGCCAAAACGCCAGGCAAACGGCg < 2:1704520/37‑1 (MQ=255) tGCCAGGGCTGGGGGCCAAAACGCCAGGCAAACGGCg < 2:5569962/37‑1 (MQ=255) tGCCAGGGCTGGGGGCAAAAAC‑CCAGGCAAAACGCGa > 2:5677148/1‑37 (MQ=16) tGCCAGGGCGGGGGGCCAAAACGCCAGGCAAACGGCg > 1:3552057/1‑37 (MQ=255) gCCAGGGCTGGGGGCCAAAACGCCAGGCAAACGGCGa > 2:9641065/1‑37 (MQ=255) gCCAGGGCTGGGGGCCAAAACGCCAGGCAAACGGCGa < 1:10226709/37‑1 (MQ=255) gCCAGGGCTGGGGGCCAAAACGCCAGGCAAACGGCGa > 1:7068986/1‑37 (MQ=255) ccAGGGCTGGGGGCCAAAACGCCAGGCAAACGGCGAg > 1:844428/1‑37 (MQ=255) ccAGGGCTGGGGGCCAAAACGCCAGGCAAACGGCGAg < 2:9566608/37‑1 (MQ=255) cAGGGCTGGGGGCCAAAACGCCAGGCAAACGGCGAGc < 2:3222263/37‑1 (MQ=255) cAGGGCTGGGGGCCAAAACGCCAGGCAAACGGCGAGc > 1:9487983/1‑37 (MQ=255) cAGGGCTGGGGGCCAAAACGCCAGGCAAACGGCGAGc > 2:9155673/1‑37 (MQ=255) cAGGGCTGGGGGCCAAAACGCCAGGCAAACGGCGAGc < 2:9823164/37‑1 (MQ=255) aGGGCTGGGGGCCAAAACGCCAGGCAAACGGCGAGCt > 1:8300604/1‑37 (MQ=255) aGGGCTGGGGGCCAAAACGCCAGGCAAACGGCGAGCt > 1:8136069/1‑37 (MQ=255) gggCTGGGGGCCAAAACGCCAGGCAAACGGCGAGCTg > 1:901212/1‑37 (MQ=255) gggCTGGGGGCCAAAACGCCAGGCAAACGGCGAGCTg > 1:5384236/1‑37 (MQ=255) ggCTGGGGGCCAAAACGCCAGGCAAACGGCGAGCTGa > 1:3006591/1‑37 (MQ=255) | GAAATTGGCACAGCAAAACCCGCTTATACCTGCCAGGGCTGGGGGCCAAAACGCCAGGCAAACGGCGAGCTGA > REL606/1636350‑1636422 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |