| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 1423581 = | 192 (1.150) | 20 (0.130) | 10/64 | 15.6 | 12.4% | coding (1926/2226 nt) | ECB_01342 | conserved hypothetical protein |
| ? | REL606 | = 2271321 | 113 (0.760) | coding (513/651 nt) | atoA | acetyl‑CoA:acetoacetyl‑CoA transferase, beta subunit | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 156 total aligned reads displayed.
TGCGCAACATGCGGTGCATATGCTGGTTACTGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCA > REL606/2271285‑2271358 | tGCGCAACATGCGGTGCATATGCTGGTTACTGAACTg < 2:8975784/37‑1 (MQ=255)tGCGCAACATGCGGTGCATATGCTGGTTACTGAACTg < 1:707585/37‑1 (MQ=255) gcgcAACATGCGGTGCATATGCTGGTTACTGAACTgg < 1:344757/37‑1 (MQ=255) cgcAACATGCGGTGCATATGCTGGTTACTGAACTGGc > 2:3014482/1‑37 (MQ=255) cgcAACATGCGGTGCATATGCTGGTTACTGAACTGGc > 1:10541423/1‑37 (MQ=255) cgcAACATGCGGTGCATATGCTGGTTACTGAACTGGc > 1:4693310/1‑37 (MQ=255) cgcAACATGCGGTGCATATGCTGGTTACTGAACTGGc < 1:6668802/37‑1 (MQ=255) cgcAACATGCGGTGCATATGCTGGTTACTGAACTGGc > 2:7465381/1‑37 (MQ=255) cgcAACATGCGGTGCATATGCTGGTTACTGAACTGGc < 2:10868453/37‑1 (MQ=255) gcAACATGCGGTGCATGTGCTGGTTACTGAACCGGCt > 2:4769552/1‑37 (MQ=38) gcAACATGCGGTGCATATGCTGGTTACTGAACTGGCt < 2:290554/37‑1 (MQ=255) gcAACATGCGGTGCATATGCTGGTTACTGAACTGGCt > 1:7012116/1‑37 (MQ=255) gcAACATGCGGTGCATATGCTGGTTACTGAACTGGCt < 2:8093781/37‑1 (MQ=255) gcAACATGCGGTGCATATGCTGGTTACTGAACTGGCt > 1:1126306/1‑37 (MQ=255) gcAACATGCGGTGCATATGCTGGTTACTGAACTGGCt > 2:8145394/1‑37 (MQ=255) gcAACATGCGGTGCATATGCTGGTTACTGAACTGGCt < 1:10212306/37‑1 (MQ=255) gcAACATGCGGTGCATATGCTGGTTACTGAACTCGCt > 1:1528237/1‑37 (MQ=255) gcAACATGCGGTGCATATGCTAGTTACTTATCTGGCt < 2:1436634/37‑1 (MQ=37) cAACATGCGGTGCATATGCTGGTTACTGAACTGGCTg > 1:7848811/1‑37 (MQ=255) cAACATGCGGTGCATATGCTGGTTACTGAACTGGCTg > 2:1020685/1‑37 (MQ=255) cAACATGCGGTGCATATGCTGGTTACTGAACTGGCTg > 1:4918830/1‑37 (MQ=255) cAACATGCGGTGCATATGCTGGTTACTGAACTGGCTg > 2:8262382/1‑37 (MQ=255) cAACATGCGGGGCATATGCTGGTTACTGAACTGGCTg < 1:3879739/37‑1 (MQ=255) aaCATGCGGTGCATATGCTGGTTACTGAACTGGCTgg > 1:3486164/1‑36 (MQ=255) aaCATGCGGTGCATATGCTGGTTACTGAACTGGCTgg > 1:3135428/1‑36 (MQ=255) aaCATGCGGTGCATATGCTGGTTACTGAACTGGCTGt < 2:11165049/37‑1 (MQ=255) aCATGCGGTGCATATGCTGGTTACTGAACTGGCTGTc < 2:5017665/37‑1 (MQ=255) aCATGCGGTGCATATGCTGGTTACTGAACTGGCTGTc < 2:5578162/37‑1 (MQ=255) aCATGCGGTGCATATGCTGGTTACTGAACTGGCTGTc < 2:974316/37‑1 (MQ=255) cATGCGGTGCATATGCTGGTTACTGAACTGGCTGTCt < 1:959679/37‑1 (MQ=255) aTGCGGTGCATATGCTGGTTACTGAACTGGCTGTCtt < 2:8045160/37‑1 (MQ=255) tGCGGTGCATATGCTGGTTACTGAACTGGCTGTCttt < 2:1747105/37‑1 (MQ=255) gCGGTGCATATGCTGNNNACTGAACTGGCTGTCTTTc < 2:7033243/37‑1 (MQ=255) gCGGTGCATATGCTGGTTACTGAACTGTCTGTCTTTc < 1:8187784/37‑1 (MQ=255) gCGGTGCATATGCTGGTTACTGAACTGTCTGGCTTTc > 1:9716232/1‑37 (MQ=37) gCGGTGCATATGCTGGTTACTGAACTGGCTGTCTTTc > 2:2542678/1‑37 (MQ=255) gCGGTGCATATGCTGGTTACTGAACTGGCTGTCTTTc < 1:5412423/37‑1 (MQ=255) cGGTGCATATGCTGGTTACTGAACTGGCTGTCTTTCg > 2:6416214/1‑37 (MQ=255) tgTGCATATGCTGGTTACTGAACTGTCTGTCTTTCGt < 1:8034668/36‑1 (MQ=38) ggTGCATATGCTGGTTACTGAACTGGCTGTCTTTCGt > 2:10156686/1‑37 (MQ=255) ggTGCATATGCTGGTTACTGAACTGGCTGTCTTTCGt < 1:10435401/37‑1 (MQ=255) ggTGCATATGCTGGTTACTGAACTGGCTGGCTTTCGt > 2:8908982/1‑37 (MQ=255) ggTGCATATGCTGGTTACTGAACTGGCCGTCTTTCGt > 2:7564875/1‑37 (MQ=255) gTGCATATGCTGGTTACTGAACTGGCTGTCTTTCGtt < 1:4714456/37‑1 (MQ=255) tGCATATGCTGGTTACTGAACTGGCTGTCTTTCGttt < 1:1876045/37‑1 (MQ=255) tGCATATGCTGGTTACTGAACTGGCTGTCTTTCGttt < 2:11040571/37‑1 (MQ=255) tGCATATGCTGGTTACTGAACTGGCTGTCTTTCGttt < 2:7545833/37‑1 (MQ=255) gCATATGCTGGTTACTGAACTGGCTGTCTTTCGtttt < 2:9024996/37‑1 (MQ=255) gCATATGCTGGTTACTGAACTGGCTGTCTTTCGtttt > 2:3671610/1‑37 (MQ=255) gCATATGCTGGTTACTGAACTGGCTGGCTTTCGtttt > 2:3541770/1‑37 (MQ=255) cATATGCTGGTTACTGAACTGGCTGTCTTTCGttttt > 2:1269925/1‑36 (MQ=255) cATATGCTGGTTACTGAACTGGCTGTCTTTCGTTTTa < 1:6301586/37‑1 (MQ=255) cATATGCTGGTTACTGAACTGGCTGTCTTTCGTTTTa < 1:1183443/37‑1 (MQ=255) cATATGCTGGTTACTGAACTGGCTGGCTTTCGttttt > 2:3906290/1‑36 (MQ=38) atatGCTGGTTACTGAACTGGCTGTCTTTCGTTTTAt < 1:1081182/37‑1 (MQ=255) tatGCTGGTTACTGAACTGGCTGTCTTTTGTtttttt > 2:2149610/1‑37 (MQ=37) tatGCTGGTTACTGAACTGGCTGGCTTTTGTTTTAtt > 2:5257801/1‑37 (MQ=37) atGCTGGTTACTGAACTGGCTNTCTTTCGTTTTAttt > 2:5780776/1‑36 (MQ=255) atGCTGGTTACTGAACTGGCTGTCTTTCGTTTTATTg < 2:8355393/37‑1 (MQ=255) tGCTGGTTACTGAACTGGCTGTCTTTCGTTTTTTTGa > 2:2479432/1‑37 (MQ=255) tGCTGGTTACTGAACTGGCTGTCTTTCGTTTTATTGa < 1:6493399/37‑1 (MQ=255) tGCTGGTTACTGAACTGGCTGTCTTTCGTTTTATTGa < 1:10841685/37‑1 (MQ=255) gCTGGTTACTGAACTGGCTGTCTTTCGTTTTATTGAc < 2:7675920/37‑1 (MQ=255) gCTGGTTACTGAACTGGCTGGCTTTCGTTTTATTGAc > 2:6222401/1‑37 (MQ=255) gCTGGTTACTGAACTGGCTGGCTTTCGTCTTATTGAc > 2:838672/1‑37 (MQ=37) gCTGGTTACTGAACTGGCTGGCTTTCGGTTTATTTAc > 2:6662990/1‑37 (MQ=25) cTGGTTACTGAACTGGCTGTCTTTCGTTTTATTGACg < 2:7832826/37‑1 (MQ=255) cTGGTTACTGAACTGGCTGTCTTTCGTTTTATTGACg < 1:437849/37‑1 (MQ=255) cTGGTTACTGAACTGGCTGGCTTTCGTTTTTTTGACg > 2:9700363/1‑37 (MQ=37) tGGTTACTGAACTGGCTGTCTTTCGTTTTATTGACgg < 1:9135858/37‑1 (MQ=255) tGGTTACTGAACTGGCTGTCTTTCGTTTTATTGACgg < 2:6273871/37‑1 (MQ=255) ggTTACTGAACTGGCTTTCTTTCGTTTTATTGACGGc < 1:9040674/37‑1 (MQ=255) gTTACTGAACTGGCTGTCTTTCGTTTTATTGACGGCa < 2:7415092/37‑1 (MQ=255) ttACTGAACTGGCTGTCTTTCGTTTTATTGACGGCaa > 2:8878808/1‑37 (MQ=255) ttACTGAACTGGCTGTCTTTCGTTTTATTGACGGCaa > 2:5875600/1‑37 (MQ=255) ttACTGAACTGGCTGTCTTTCGTTTTATTGACGGCaa > 2:5459519/1‑37 (MQ=255) tACTGAACTGGCTGTCTTTCGTTTTATTGACGGCaaa < 2:1931441/37‑1 (MQ=255) tACTGAACTGGCTGTCTTTCGTTTTATTGACGGCaaa < 2:8518736/37‑1 (MQ=255) aCTGAACTGGCTGTCTTTCGTTTTATTGACGGCaaaa < 2:7587217/37‑1 (MQ=255) cTGAACTGGCTGTGTTTCGGTTTATTGACGGGAAAAt > 2:6982295/1‑37 (MQ=25) cTGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAAt < 1:3910990/37‑1 (MQ=255) cTGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAAt > 2:2032655/1‑37 (MQ=255) cTGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAAt < 2:365395/37‑1 (MQ=255) cTGAACTGGCTGGCTTTCGTTTTATTGACGGCAAAAt < 1:727916/37‑1 (MQ=255) tGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAAtg < 2:6828423/37‑1 (MQ=255) tGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAAtg < 1:4370597/37‑1 (MQ=255) tGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAAtg > 2:2252578/1‑37 (MQ=255) gAAGTGGCTGTCTTTCTTTTTATTGACGGCAAAAtgt < 2:2220257/37‑1 (MQ=38) aaCTGGCTGTCTTTCGTTTTATTGACGGCAAAAtgtg < 1:10058720/37‑1 (MQ=255) aaCTGGCTGTCTTTCGTTTTATTGACGGAAAAAtgtg < 1:8261716/37‑1 (MQ=255) aCTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTgg < 2:1153928/37‑1 (MQ=255) cTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGc > 2:9568069/1‑37 (MQ=255) tGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCt < 2:381537/37‑1 (MQ=255) tGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCt < 2:2974551/37‑1 (MQ=255) ggCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTc < 2:4661233/37‑1 (MQ=255) ggCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTc < 2:4505115/37‑1 (MQ=255) ggCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTc > 2:2596163/1‑37 (MQ=255) ggCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTc < 2:1673693/37‑1 (MQ=255) ggCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTc < 2:1249339/37‑1 (MQ=255) ggCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTc < 1:8955799/37‑1 (MQ=255) | TGCGCAACATGCGGTGCATATGCTGGTTACTGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCA > REL606/2271285‑2271358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |