| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 3,928,336 | +AAG | coding (120/1260 nt) | rho → | transcription termination factor Rho |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3928332 | 0 (0.000) | 38 (1.070) +GAA |
31/136 | 0.1 | 100% | coding (116/1260 nt) | rho | transcription termination factor Rho |
| ? | REL606 | 3928333 = | 0 (0.000) | coding (117/1260 nt) | rho | transcription termination factor Rho | |||||
GATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3928258‑3928332‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGT > REL606/3928333‑3928405 ||| GATCACTCTCGGCGAAAATATGCGGCTGGAAAACCTGTCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTG < 1:862134/76‑1 ATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGA > 1:1113991/1‑76 TCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAA < 2:857071/76‑1 CACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAG > 1:1108989/1‑76 CACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAG > 1:48052/1‑76 ACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAGA < 1:1150464/76‑1 CTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAGAA > 1:686591/1‑76 CTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAGAAGC > 1:84784/1‑76 CTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAGAAGC < 2:837086/76‑1 CGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAGAAGCAG < 1:323393/76‑1 GAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAGAAGCAGCACG < 2:344022/76‑1 GAAAAGTTGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAGAAGCAGCACG < 1:138355/76‑1 AAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAGAAGCAGCACGC < 2:38587/76‑1 ATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAGAAGCAGCACGCAAA > 2:282088/1‑76 nGGGCTGGAAAACCTGGCTCGTATGCGTGAGCAGGACATTATTTTTGCCATCCTGAAGAAGCAGCACGCAAAGAGT < 1:1039278/75‑1 GGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAGAAGCAGCACGCAAAGAGTG < 1:389695/76‑1 GCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAGAAGCAGCACGCAAAGAGTGGC > 2:855489/1‑76 CTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAGAAGCAGCACGCAAAGAGTGGCG < 2:970973/76‑1 TGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAGAAGCAGCACGCAAAGAGTGGCGA > 2:607146/1‑76 GGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGTCATCCTGAATAAGCAGCACGCAAAGAGTGGCGAA < 2:484731/76‑1 AACCTGGCTCGTATGCGTAAGCAAGACATTATTTTTGCCATCCTGATGAAGCAGCACGCAAAGAGTGGCGAAGAca < 1:1027364/76‑3 tCCTGGCTCGGATGCGTATGCAGGAGATTATTCGTGCCATCCTGTAGAAGCAGCACGCAAAGAGTGGCGAAGATAT < 1:1094109/75‑1 CTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGG < 2:815036/76‑1 AAGCAGGACATTATTTTTGCCATCCTGAAGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTAC > 1:46446/1‑76 GCAGGACATTATTTTTGCCGTCCTGAAGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTG < 2:713010/76‑1 CAGGACATTATTTTTGCCATCCTGAAGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGG > 2:25805/1‑76 CAGGACATTATTTTTGCCATCCTGAAGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGG > 2:654807/1‑76 ACATTATTTTTGCCATCCTGAAGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGAT > 1:370839/1‑76 CATTATTTTTGCCATCCTGAAGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATA < 2:778712/76‑1 ATTATTTTTGCCATCCTGAAGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATAT < 2:388564/76‑1 TTATTTTTGCCATCCTGAAGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATT < 2:556488/76‑1 TATTTTTGCCGTCCTGAAGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTG > 1:156261/1‑76 ATTTTTGCCATCCTGAAGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGC > 2:714426/1‑76 ATTTTTGCCATCCTGAAGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGC < 2:84784/76‑1 TTTGCCATCCTGAAGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGG > 1:216767/1‑76 TTTGCCATCCTGAAGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGG > 1:438374/1‑76 TGCCATCCTGAAGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGAT > 1:1109997/1‑76 GCCATCCTGAAGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATG > 2:1098745/1‑76 CCTGAAGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTT > 1:87591/1‑76 CTGAAGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTG > 1:761104/1‑76 GAAGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGANTTGGT > 2:968056/1‑76 ||| GATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3928258‑3928332‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGT > REL606/3928333‑3928405 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |