| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 1496952 = | 35 (1.460) | 3 (0.140) | 3/134 | 3.0 | 8.9% | coding (594/618 nt) | yncG | predicted enzyme |
| ? | REL606 | 1497195 = | 30 (1.410) | coding (144/213 nt) | yncH | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATCATTGTGGATAAAGTTACTGAATAATAAATAACATAATCTTCTGGTATCCCACTCAAATAATTTCATTCCTTTTTAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1497031‑1496952‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttttaatGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCGGCAGGTATGCTAAAAGG > REL606/1497195‑1497268 ATCATTGTGGATAAAGTTACTGAATAATAAATAACATAATCTTCTGGTATCCCACTCAAATAATTTCATTCCTTTT < 1:383786/76‑1ATCATTGTGGATAAAGTTACTGAATAATAAATAACATAATCTTCTGGTATCCCACTCAAATAATTTCATTCCTTTT < 2:273225/76‑1 TCATTGTGGATAAAGTTACTGAATAATAAATAACATAATCTTCTGGTATCCCACTCAAATAATTTCATTCCTTTTT < 2:390378/76‑1 TCATTGTGGATAAAGTTACTGAATAATAAATAACATAATCTTCTGGTATCCCACTCAAATAATTTCATTCCTTTTT < 2:494557/76‑1 CATTGTGGATAAAGTTACTGAATAATAAATAACATAATCTTCTGGTATCCCACTCAAATAATTTCATTCCTTTTTA < 1:624859/76‑1 ATAAAGTTACTGAATAATAAATAACATAATCTTCTGGTATCCCACTCAAATAATTTCATTCCTTTTTAATGATGGA < 2:406408/76‑1 GAATAATAAATAACATAATCTTCTGGTATCCCACTCAAATAATTTCATTCCTTTTTAATGATGGATATGCTCGGAG < 2:273179/76‑1 AATAATAAATAACATAATCTTCTGGTATCCCACTCAAATAATTTCATTCCTTTTTAATGATGGATATGCTCGGAGT < 2:401799/76‑1 TTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCGGCAGGTATGCT < 2:680180/76‑1 TTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCGGCAGGTATGCT < 2:742239/76‑1 TTTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCGGCAGGTATGCTA < 2:235884/76‑1 TTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCGGCAGGTATGCTAA > 1:678716/1‑76 ATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCGGCAGGTATGCTAAAAGG > 1:50639/1‑76 ATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCGGCAGGTATGCTAAAAGG > 2:134640/1‑76 ATCATTGTGGATAAAGTTACTGAATAATAAATAACATAATCTTCTGGTATCCCACTCAAATAATTTCATTCCTTTTTAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1497031‑1496952‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttttaatGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCGGCAGGTATGCTAAAAGG > REL606/1497195‑1497268 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |