| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2105023 | 180 (1.140) | 8 (0.050) | 3/148 | 14.1 | 4.2% | coding (1103/1119 nt) | ECB_01993 | hypothetical protein |
| ? | REL606 | = 2105232 | 187 (1.210) | intergenic (+193/+19) | ECB_01993/ECB_01994 | hypothetical protein/hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTGTAAATGAGTCCCAAATATATCCCGCACAAAGAGAGCTTGTCAGTTGCTTAATCTGTGGAGATTATTCTTC‑‑‑‑TTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2104948‑2105023‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tCTGCTTAAAATAGTGTTATCTACAGATCAAACTTTAGTTGATACGAGTCACTGTCCTCCCCGTAACAACTGGAGT < REL606/2105232‑2105158 TTGTAAATGAGTCCCAAATATATCCCGCACAAAGAGAGCTTGTCAGTTGCTTAATCTGTGGAGATTATTCTTC‑‑‑‑TTT < 1:2684453/76‑1TTGTAAATGAGTCCCAAATATATCCCGCACAAAGAGAGCTTGTCAGTTGCTTAATCTGTGGAGATTATTCTTC‑‑‑‑TTT > 2:3489312/1‑76 TTAATCTGTTGAGATTATTCTTC‑‑‑‑TTTCTGCTTAAAATAGTGTTATCTACAGATCAAACTTTAGTTGATACGAGTCA > 2:1032086/1‑76 TTAATCTGTTGAGATTATTCTTC‑‑‑‑TTTCTGCTTAAAATAGTGTTATCTACAGATCAAACTTTAGTTGATACGAGTCA > 2:4797514/1‑76 TTAATCTGTTGAGATTATTCTTC‑‑‑‑TTTCTGCTTAAAATAGTGTTATCTACAGATCAAACTTTAGTTGATACGAGTCA > 2:969801/1‑76 CTGTGGAGATTATTCTTCTTTTTTTCTGCTTAAAATAGTGTTATCTACAGATCAAACTTTAGTTGATACGAGTCAC > 2:3202279/1‑76 CTGTGGAGATTATTCTTC‑‑‑‑TTTCTGCTTAAAATAGTGTTATCTACAGATCAAACTTTAGTTGATACGAGTCACTGTC > 2:2080466/1‑76 CTGTGGAGATTATTCTTC‑‑‑‑TTTCTGCTTAAAATAGTGTTATCTACAGATCAAACTTTAGTTGATACGAGTCACTGTC > 2:2764112/1‑76 CTGTGGAGATTATTCTTC‑‑‑‑TTTCTGCTTAAAATAGTGTTATCTACAGATCAAACTTTAGTTGATACGAGTCACTGTC > 2:4921200/1‑76 AGATTATTCTTC‑‑‑‑TTTCTGCTTAAAATAGTGTTATCTACAGATCAAACTTTAGTTGATACGAGTCACTGTCCTCCCC > 2:3228259/1‑76 TCTGTTTAAAATAGTGTTATCAACAGATCAAACTTTAGTTGATACGAGTCACTGTCCTCCCCGTAACAACTGGAGT < 1:4658742/76‑1 TCTGCTTAAAATAGTGTTATCTACAGATCAAACTTTAGTTGATACGAGTCACTGTCCTCCCCGTAACAACTGGAGT > 1:4112262/1‑76 TCTGCTTAAAATAGTGTTATCTACAGATCAAACTTTAGTTGATACGAGTCACTGTCCTCCCCGTAACAACTGGAGT < 1:5194098/76‑1 TCTGCTTAAAATAGTGTTATCTACAGATCAAACTTTAGTTGATACGAGTCACTGTCCTCCCCGTAACAACTGGAGT > 2:4635161/1‑76 TTGTAAATGAGTCCCAAATATATCCCGCACAAAGAGAGCTTGTCAGTTGCTTAATCTGTGGAGATTATTCTTC‑‑‑‑TTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2104948‑2105023‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tCTGCTTAAAATAGTGTTATCTACAGATCAAACTTTAGTTGATACGAGTCACTGTCCTCCCCGTAACAACTGGAGT < REL606/2105232‑2105158 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |