| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 2032029–2032065 | 2052638 | 20574–20610 | 124 [113] | [119] 123 | [manB]–[wzxC] | [manB],manC,insB‑14,insA‑14,wbbD,wbbC,wzy,wbbB,wbbA,vioB,vioA,wzx,rmlC,rfbA,rfbD,rfbB,galF,wcaM,wcaL,wcaK,[wzxC] |
Only 100 of 124 total aligned reads displayed.
ATGATCTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAGCGGT > REL606/2031953‑2032058 | atgatCTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACt < 2:8571212/76‑1 (MQ=34)atgatCTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACt < 1:603487/76‑1 (MQ=34)atgatCTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACt < 1:581467/76‑1 (MQ=34)atgatCTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACt > 1:5735168/1‑76 (MQ=34)atgatCTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACt < 1:4144236/76‑1 (MQ=34)atgatCTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACt < 1:2683751/76‑1 (MQ=34)atgatCTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACt < 2:6661902/76‑1 (MQ=34)atgatCTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACt > 1:759533/1‑76 (MQ=34)atgatCTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACt < 1:1779825/76‑1 (MQ=34) tgatCTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTg > 2:6740208/1‑76 (MQ=34) tgatCTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTg > 1:613738/1‑76 (MQ=34) gatCTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGc > 1:50930/1‑76 (MQ=34) atCTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGcc > 1:1276533/1‑76 (MQ=34) atCTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGcc > 1:3125423/1‑76 (MQ=34) tCTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGccc > 1:576065/1‑76 (MQ=34) cTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGCTAAACTGTCCt > 1:945400/1‑76 (MQ=255) cTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATACACTGCCCt > 1:2329627/1‑76 (MQ=21) cTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCt < 1:2271311/76‑1 (MQ=34) cTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCt > 1:1865998/1‑76 (MQ=34) cTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCt > 2:2101779/1‑76 (MQ=34) ttCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCtt > 2:8782285/1‑76 (MQ=34) tCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCttt < 2:8554087/76‑1 (MQ=34) tCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCttt < 1:3374396/76‑1 (MQ=34) cgcgCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCtttt > 2:2291019/1‑76 (MQ=34) cgcgCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCtttt > 2:5557311/1‑76 (MQ=34) gcgcCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCttttt < 2:50210/76‑1 (MQ=34) gcgcCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCttttt < 1:7254480/76‑1 (MQ=34) cgcCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTc < 1:435674/76‑1 (MQ=34) cgcCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTc < 2:3811083/76‑1 (MQ=34) cgcCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTc > 2:5643171/1‑76 (MQ=34) cgcCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTc < 1:6254170/76‑1 (MQ=34) gcCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCg < 2:7394431/76‑1 (MQ=34) gcCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCg < 2:7678255/76‑1 (MQ=34) cGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTc < 1:8708108/76‑1 (MQ=34) gggATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCa < 1:5831397/76‑1 (MQ=34) gggATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCa > 1:8537671/1‑76 (MQ=34) gggATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCa > 2:6195255/1‑76 (MQ=34) gggATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCa < 1:7452626/76‑1 (MQ=34) ggATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCaa < 2:8467407/76‑1 (MQ=34) ggATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCaa < 1:2730489/76‑1 (MQ=34) gATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCaaa > 2:4174449/1‑76 (MQ=34) gATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCaaa < 1:1701839/76‑1 (MQ=34) gATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCaaa < 1:775031/76‑1 (MQ=34) gATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCaaa < 1:2023330/76‑1 (MQ=34) gATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCaaa > 2:1293695/1‑76 (MQ=34) aTTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAAc < 2:5850769/76‑1 (MQ=34) aTTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAAc > 1:1702957/1‑76 (MQ=34) aTTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAAc < 2:6357448/76‑1 (MQ=34) aTTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAAc < 1:5057374/76‑1 (MQ=34) tttttttCGGGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACa < 2:6063621/76‑1 (MQ=21) tttttttCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACa > 1:2598609/1‑76 (MQ=34) tttttttCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACa > 2:8494165/1‑76 (MQ=34) tttttttCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACa < 2:5370205/76‑1 (MQ=34) ttttttCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAg > 1:1530984/1‑76 (MQ=34) ttttttCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAg < 1:7374830/76‑1 (MQ=34) ttttttCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAg > 1:8978962/1‑76 (MQ=34) tttttcCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAg < 1:7537044/76‑1 (MQ=21) ttttCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGa > 2:1091106/1‑76 (MQ=34) ttttCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGa < 1:5193936/76‑1 (MQ=34) ttttCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGa > 1:5519283/1‑76 (MQ=34) ttttCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGa > 1:649301/1‑76 (MQ=34) ttttCGAGAAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGa < 1:6998190/76‑1 (MQ=21) tttCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGaa > 2:3495750/1‑76 (MQ=34) tttCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGaa < 1:3268333/76‑1 (MQ=34) tttCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGaa < 2:5832413/76‑1 (MQ=34) tttCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGaa > 2:3673454/1‑76 (MQ=34) tttCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGaa < 1:7263112/76‑1 (MQ=34) tttCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGaa < 1:7349261/76‑1 (MQ=34) tttCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGaa < 2:1084529/76‑1 (MQ=34) ttCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGaaa < 2:6878627/76‑1 (MQ=34) ttCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGaaa < 1:5391692/76‑1 (MQ=34) ttCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGaaa < 2:7935393/76‑1 (MQ=34) ttCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGaaa < 2:50930/76‑1 (MQ=34) tctaGGAATGCTTCTGCCAGCAGGCCAACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAAc < 1:6382564/73‑1 (MQ=255) cGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACa > 2:8801204/1‑76 (MQ=34) cGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACa < 2:4192681/76‑1 (MQ=34) cGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACa < 1:40576/76‑1 (MQ=34) cGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACa < 1:470292/76‑1 (MQ=34) cGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACa < 1:5127843/76‑1 (MQ=34) cGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACa < 1:8349173/76‑1 (MQ=34) gAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAg > 1:2667034/1‑76 (MQ=34) gAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAg < 2:3046034/76‑1 (MQ=34) gAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAg < 1:6931432/76‑1 (MQ=34) gAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAg < 2:6616787/76‑1 (MQ=34) aGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAGc < 1:6980406/76‑1 (MQ=34) aGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAGc > 2:7730801/1‑76 (MQ=34) aGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAGc > 2:1806314/1‑76 (MQ=34) aGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAGc < 2:4038411/76‑1 (MQ=34) gAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAGCga < 2:5549438/76‑2 (MQ=17) gAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAGCga < 2:3898611/76‑2 (MQ=17) gAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAGCga < 2:5645156/76‑2 (MQ=17) gAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAGCga < 2:8630423/76‑2 (MQ=17) gAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAGCga < 1:3026769/76‑2 (MQ=17) aaTGCTTCTTCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAGCgat < 1:5258729/76‑3 (MQ=9) aaTGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAGCgat < 1:8475976/76‑3 (MQ=14) aaTGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAGCgat < 2:2112847/76‑3 (MQ=14) aaTGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAGCgat < 1:4892728/76‑3 (MQ=14) aaTGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAGCgat > 1:4334191/1‑74 (MQ=14) aaTGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAGCgat > 2:8598175/1‑74 (MQ=14) aaTGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAGCgat < 2:4847430/76‑3 (MQ=14) | ATGATCTTCGCGCCGGGATTTTTTTCGAGGAATGCTTCTGCCAGCAGGCCGACAATGTAGTAGCCCTCGATAAACTGCCCTTTTTCGTCAAACAGGAAACAGCGGT > REL606/2031953‑2032058 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |