| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 3,014,099 | (ACAGGC)3→4 | coding (680/1137 nt) | ECB_02815 → | Capsule polysaccharide export inner‑membrane protein kpsE |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3014081 = | 23 (0.080) | 230 (0.980) | 85/124 | 0.1 | 95.8% | coding (662/1137 nt) | ECB_02815 | Capsule polysaccharide export inner‑membrane protein kpsE |
| ? | REL606 | = 3014086 | 1 (0.000) | coding (667/1137 nt) | ECB_02815 | Capsule polysaccharide export inner‑membrane protein kpsE | |||||
Only 100 of 333 total aligned reads displayed.
AGCAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3014168‑3014081‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgtgcctgtgCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTG < REL606/3014086‑3014012 GCAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGC > 2:4059/1‑76 AGTTCCGCAGGTCCGCTTCCATCTGGCTCTTCTGGTCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTG > 2:8323701/1‑76 AGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTG > 2:9473166/1‑76 AGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTG > 2:3020451/1‑76 TCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGC < 2:187843/76‑1 TCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGC > 1:3195846/1‑76 CCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCC > 2:7591671/1‑76 CGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCT < 1:1227059/76‑1 cgAGGCCCGCTCCCATCTGGACTTTCTGGCCCATCACCGTATTCACTAACGGGCTCGCCGCCTGTGCCTGTGCCTG < 2:7704278/74‑1 GCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTG > 1:3563714/1‑76 CAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGT < 1:1019047/76‑1 CAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGT > 2:1083815/1‑76 CAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGT < 1:2117956/76‑1 gcTCCGCTCCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGC < 2:5665471/74‑1 GGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGC > 1:5119485/1‑76 TCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCT < 1:7164512/76‑1 CCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTG < 1:2997442/76‑1 CCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTG > 2:1585573/1‑76 CCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTG < 2:9101493/76‑1 CCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTG > 2:6239597/1‑76 CCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTG < 2:6022228/76‑1 GCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTG < 2:3098332/76‑1 GCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTG < 1:3504383/76‑1 CTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGG > 2:4330429/1‑76 CATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCC < 2:1537539/76‑1 CATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCC < 1:1090090/76‑1 CATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCC > 1:8774320/1‑76 CATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCC > 1:6995021/1‑76 CATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCC < 1:5431002/76‑1 CATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCC > 1:1425427/1‑76 ATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCA > 1:1952204/1‑76 ATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCA > 1:9398078/1‑76 TCTGGATCTTCTGGCCCATCAGCGTATTCACTACCGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAG > 2:7070222/1‑76 TCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAG > 1:2500779/1‑76 TCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTT > 1:7104692/1‑76 CTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTG > 1:6724551/1‑76 TTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGT > 1:4397529/1‑76 TCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTT < 2:3745222/76‑1 TCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTT > 1:5282300/1‑76 TGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGT > 1:745480/1‑76 TGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGT > 1:1798754/1‑76 TGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGT > 2:3519976/1‑76 TGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGT > 1:3672768/1‑76 TGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGT > 1:4187334/1‑76 TGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGT > 1:8956313/1‑76 TGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGT > 1:4589245/1‑76 GGCCCCTCAGGGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTT < 2:5574776/76‑1 GGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTT > 2:4174585/1‑76 GGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTT > 2:8682301/1‑76 GGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTT > 2:2295979/1‑76 CCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGT > 2:8531484/1‑76 CCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTC > 1:824595/1‑76 CATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCT > 1:5604244/1‑76 acCAGCTTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTT < 1:775676/74‑1 ATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTT > 1:4031631/1‑76 ATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTT > 1:1693692/1‑76 TCAGGGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTG < 1:4835983/76‑1 TCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTG < 2:9167686/76‑1 AGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGAT < 1:7563358/76‑1 gtTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAA < 1:9038931/74‑1 CGTATTCCCTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAA < 1:8620222/76‑1 CGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAA > 1:918226/1‑76 TATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGA < 1:1894782/76‑1 TATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGA > 2:6732193/1‑76 ATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAG > 2:4465799/1‑76 ACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCA < 1:6696942/76‑1 ACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCA < 2:1349928/76‑1 TAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAAT > 2:8101291/1‑76 AACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATT > 2:1950551/1‑76 AACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATT > 1:8019332/1‑76 AACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATT > 1:852000/1‑76 AACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATT > 2:5496736/1‑76 AACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATT > 1:8716230/1‑76 AACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATT > 2:1754289/1‑76 CGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCC < 1:640384/76‑1 TCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTT < 2:2052159/76‑1 CGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTG < 2:7455811/76‑1 CGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTG < 1:2893427/76‑1 GCCGCCTGTGCCTGTGCCTTTGCCTGTGGATCCAGATCGTGGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTaga < 2:7441062/76‑4 CCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGC < 2:2570959/76‑1 CTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCG > 1:650576/1‑76 TGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCC > 1:4691013/1‑76 GCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCA < 1:1345766/76‑1 GCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCA < 1:6214469/76‑1 GCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCA < 1:524236/76‑1 CTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGA > 1:330005/1‑76 TGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGAC < 2:6298959/76‑1 CCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTG < 2:4589245/76‑1 CCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTG < 1:517935/76‑1 CCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTG < 1:6022827/76‑1 CTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGG < 2:5168899/76‑1 CTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGG > 2:2793987/1‑76 TGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGC > 2:8030523/1‑76 TGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGT > 1:2586916/1‑76 GCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTG < 2:4848647/76‑1 GCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTG < 2:4556685/76‑1 GCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTG > 2:695752/1‑76 GCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTG < 2:3672768/76‑1 GCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTG < 2:2434945/76‑1 GCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTG < 2:5268779/76‑1 AGCAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3014168‑3014081‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgtgcctgtgCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTG < REL606/3014086‑3014012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |