| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 2031770–2031796 | 2052603 | 20808–20834 | 85 [72] | [81] 85 | [manB]–[wzxC] | [manB],manC,insB‑14,insA‑14,wbbD,wbbC,wzy,wbbB,wbbA,vioB,vioA,wzx,rmlC,rfbA,rfbD,rfbB,galF,wcaM,wcaL,wcaK,[wzxC] |
CATCCGGTCGCGCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAATCACGGAAAT > REL606/2031694‑2031803 | cctCCGGTCGCGCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATc < 1:2858465/74‑1 (MQ=255)cATCCGGTCGCGCCCCAGTTCGCCCAGCGTTTTTCCTTTCAGACACCCCAGTTCGGCGACCAGCAGCCACGGGATc < 2:3107157/76‑1 (MQ=255)cATCCGGTCGCGCCCCAGTTCGCCCAGCGTTTTTCCTTTCAGACACCCCAGTTCGGCGACCAGCAGCCACGGGATc < 2:667705/76‑1 (MQ=255)cATCCGGTCGCGCACCAGTTCGCCCAGCGTTTTTCTTTTCAGCCCCACAAGTTCGGCGACCAGCAGCCACGGGATc < 2:7973132/76‑1 (MQ=17)cATCCGGTCGCGCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATc < 1:1300939/76‑1 (MQ=255)cATCCGGTCGCGCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATc < 1:5833638/76‑1 (MQ=255)cATCCGGTCGCGCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATc > 2:2768293/1‑76 (MQ=255)cATCCGGTCGCGCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATc < 1:302086/76‑1 (MQ=255)cATCCGGTCGCGCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATc < 2:5897385/76‑1 (MQ=255)cATCCGGTCGCGCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATc < 2:6069700/76‑1 (MQ=255)cATCCGGTCGCGCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATc < 2:7332716/76‑1 (MQ=255)cATCCGGTCGCGCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATc < 2:7837178/76‑1 (MQ=255)cATCCGGTCGCCCCCCAGTTCCCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATc < 2:3501322/76‑1 (MQ=17) aTCCGGTCGCGCCCCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCa < 1:2055305/76‑1 (MQ=255) aTCCGGTCGCGCCCCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCa < 1:8313939/76‑1 (MQ=255) aTCCGGTCGCGCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCa < 1:7933055/76‑1 (MQ=255) aTCCGGTCGCGCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCa > 1:7031432/1‑76 (MQ=255) aTCCGGTCGCGCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCa > 1:837304/1‑76 (MQ=255) tCCGGTCGCGCCCCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCAt < 1:6501304/76‑1 (MQ=255) tCCGGTCGCGCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCAt < 1:3602282/76‑1 (MQ=255) ccGGTCGCGCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATg > 2:4302343/1‑76 (MQ=255) ccGGTCGCGCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATg < 1:8100057/76‑1 (MQ=255) cGGTCGCGCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGc < 1:9261147/76‑1 (MQ=255) ggTCGCGCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCCGCCACGGGATCATGcc > 1:5791881/1‑76 (MQ=255) ggTCGCGCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGcc > 2:2804677/1‑76 (MQ=255) gTCGCGCACCAGTTCGCCCTGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCg < 1:1137627/76‑1 (MQ=255) cgcgCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCt > 2:4386939/1‑76 (MQ=255) cgcgCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACCGGATCATGCCGCt > 2:3955320/1‑76 (MQ=255) gcccACCATTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTg < 2:8058838/73‑1 (MQ=255) ccgcCCCAGTTCGCCCAGCGTTTTTCTTTTCAGACACCCCAGTTGGGCGACCAGCAGCCACGGGATCATGCCGCTg < 2:4438759/75‑1 (MQ=14) cgcACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGt > 2:8703340/1‑76 (MQ=255) gccccATTTCCCCCAGCTTGTTTCCTTTCAGCCACACCAGTACGGCGCCCACCAGCCACGGGATCATGCCGCTGTc < 2:1291076/73‑1 (MQ=14) cACCAGTTCGCCCAGCTTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCg < 1:8328068/76‑1 (MQ=255) cACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCg > 2:1421131/1‑76 (MQ=255) cACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCg > 2:1920335/1‑76 (MQ=255) cACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGAACAGCAGCCCCGGGATCATGCCGCTGTCg > 2:4361955/1‑76 (MQ=255) cccAGTTCGCCCAGGTTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGc < 2:3121325/75‑1 (MQ=255) aCCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGc > 1:3325728/1‑76 (MQ=255) ccggTTCCCCCAGCTTTTTTCCTTTCAGACACACCAGTCCGGCGACCAGCAGCCACGGGATCATGCCGCTGTAGCa < 1:1350487/73‑1 (MQ=14) ccATTTCCCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCa < 1:3944514/76‑1 (MQ=255) ccAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCa < 1:8491664/76‑1 (MQ=255) ccAGTTCCCCCATCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCa < 1:4870895/76‑1 (MQ=255) ccAGTTCCCCCAGCTTTTTCCCTTTCAGACACACCAGTCCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCa < 1:8628241/76‑1 (MQ=11) ccAGTCCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCa < 1:4816988/76‑1 (MQ=255) cAGTTCTCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAg < 2:1912467/76‑1 (MQ=255) gTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTa < 1:5674397/76‑1 (MQ=255) gTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTa > 2:2613676/1‑76 (MQ=255) tcccccAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAg < 1:2224992/73‑1 (MQ=255) tCGCCCAGCGTTTTTCCTTCCAGCCACCCCAGTCCGGCCACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAg < 1:5355777/76‑1 (MQ=14) tCGCCCAGCGTTTTTCCTTCCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAg < 1:4240941/76‑1 (MQ=255) ccGCCCGGCGTTTTTCCTTCAAGCCACACAAGTTCGGCGCCCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAg < 1:7539510/75‑1 (MQ=14) cGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGc > 2:6966079/1‑76 (MQ=255) cGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGc > 2:1162808/1‑76 (MQ=255) gCCCAGCGTTTTTCTTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCg < 1:2526677/76‑1 (MQ=255) gCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCg > 2:9208443/1‑76 (MQ=255) gCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCg > 2:1147959/1‑76 (MQ=255) gCCCAGCGTTTTTCCTTCCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCg < 1:4868910/76‑1 (MQ=255) cccAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGa > 2:4197307/1‑76 (MQ=255) cccAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGa > 1:4404680/1‑76 (MQ=255) ccAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGaa > 2:9084988/1‑76 (MQ=255) ccAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGaa < 1:6870690/76‑1 (MQ=255) cAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGaaa > 2:6118926/1‑76 (MQ=255) aGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAAt > 2:6990971/1‑76 (MQ=255) aGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAAt > 2:6912884/1‑76 (MQ=255) cGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAATCa < 1:3930577/76‑1 (MQ=255) cGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAATCa < 1:7192604/76‑1 (MQ=255) ttttttCCTTGCAGACACACCAGTGCGGCGCCCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAATCAc < 2:2821206/75‑1 (MQ=14) gTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAATCAc < 2:4115164/76‑1 (MQ=255) ttttCCTTTCAGACCCACCAGTTGGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAATCACgg < 2:8908619/76‑1 (MQ=255) ttttCCTTTCAGACACACCAGTTCGGCGCCCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAATCACgg < 2:969314/76‑1 (MQ=255) tttCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAATCACGGa > 2:6460869/1‑76 (MQ=40) tttCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAATCACGGa > 1:539631/1‑76 (MQ=40) ttCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAATCACGGaa > 2:7239401/1‑76 (MQ=39) tCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAATCACGGaag < 1:1538093/76‑2 (MQ=25) tCCTTCCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAATCACGGaag < 1:7414629/76‑2 (MQ=255) ccTTTCAGACCCCCCAGTCCGGCGCCCGGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAATCACGGaagt < 1:2804514/76‑3 (MQ=11) ccTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAATCACGGaagt > 1:7153554/1‑74 (MQ=17) ccTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAATCACGGaagt > 1:7467460/1‑74 (MQ=17) ccTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAATCACGGaagt > 1:2845013/1‑74 (MQ=17) ccTTTCAGAAACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAATCACGGaagt < 1:3085519/76‑3 (MQ=12) ccTTTCAGAAACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAATCACGGaagt < 1:1350139/76‑3 (MQ=12) ccTTTCAGAAACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAATCACGGaagt < 1:6515834/76‑3 (MQ=12) ccTTTCAGAAACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAATCACGGaagt < 1:5559641/76‑3 (MQ=12) aGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGaa > 2:2930307/1‑59 (MQ=35) aGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGaa < 1:2930307/59‑1 (MQ=35) | CATCCGGTCGCGCACCAGTTCGCCCAGCGTTTTTCCTTTCAGACACACCAGTTCGGCGACCAGCAGCCACGGGATCATGCCGCTGTCGCAGTAAGCGAAATCACGGAAAT > REL606/2031694‑2031803 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |