| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 1506094 | 344 (1.090) | 10 (0.030) | 7/140 | 20.7 | 4.0% | coding (157/201 nt) | ECB_01417 | hypothetical protein |
| ? | REL606 | = 1506258 | 164 (0.560) | intergenic (+120/‑120) | ECB_01417/ydcC | hypothetical protein/hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 190 total aligned reads displayed.
TTGCAAAGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTGAAGCTGTTTTTTATTG > REL606/1506183‑1506333 | ttGCAAAGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCAc < 2:7745732/76‑1 (MQ=255)ttGCAAAGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCAc > 2:6112722/1‑76 (MQ=255)ttGCAAAGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCAc > 1:9302302/1‑76 (MQ=255) tGCAAAGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCGGAAGTTCACt > 2:154237/1‑76 (MQ=255) tGCAAAGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACt < 1:4998582/76‑1 (MQ=255) tGCAAAGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACt > 1:9726776/1‑76 (MQ=255) tGCAAAGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACt > 2:9542116/1‑76 (MQ=255) tGCAAAGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACt > 2:5407833/1‑76 (MQ=255) tGCAAAGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACt > 2:987807/1‑76 (MQ=255) cAAAGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACttt < 1:525508/76‑1 (MQ=255) cAAAGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACttt > 1:6549691/1‑76 (MQ=255) cAAAGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACttt < 2:7305152/76‑1 (MQ=255) aaaGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACtttt < 1:7268427/76‑1 (MQ=255) aaaGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACtttt > 1:520415/1‑76 (MQ=255) aaaGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACtttt > 1:3703300/1‑76 (MQ=255) aaaGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACtttt > 1:6240544/1‑76 (MQ=255) aaaGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACtttt > 2:8400755/1‑76 (MQ=255) aaGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACttttt > 2:7071670/1‑76 (MQ=255) aGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTg < 2:9302302/76‑1 (MQ=255) aGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTg < 1:9162299/76‑1 (MQ=255) gACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGt < 1:9495990/76‑1 (MQ=255) cATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTAc > 2:4802742/1‑76 (MQ=255) aTTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACt > 1:8359097/1‑76 (MQ=255) aTTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACt < 2:8670646/76‑1 (MQ=255) aTTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACt < 1:4536444/76‑1 (MQ=255) ttAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGACGTTCACTTTTTGTACTa > 1:2217405/1‑76 (MQ=255) ttAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTa < 2:5026501/76‑1 (MQ=255) ttAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTa < 1:6765070/76‑1 (MQ=255) tAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTaa > 1:7907255/1‑76 (MQ=255) tAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTaa < 1:755359/76‑1 (MQ=255) tAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTaa > 1:3284321/1‑76 (MQ=255) aaGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTaaa > 2:411532/1‑76 (MQ=255) aaGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTaaa < 1:5921291/76‑1 (MQ=255) gggTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAaata < 2:3296194/76‑1 (MQ=255) gggTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAaata < 2:2911319/76‑1 (MQ=255) gggTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAaata < 1:633797/76‑1 (MQ=255) gggTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAaata > 1:3570144/1‑76 (MQ=255) ggTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAaataa > 1:1161265/1‑76 (MQ=255) gTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAaataat < 2:7907255/76‑1 (MQ=255) gTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAaataat > 2:7048898/1‑76 (MQ=255) tGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAAtt < 1:6586859/76‑1 (MQ=255) tGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAAtt < 2:1529387/76‑1 (MQ=255) tGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAAtt > 1:2947136/1‑76 (MQ=255) gAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTc > 1:8217735/1‑76 (MQ=255) aaGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCg > 1:8666620/1‑76 (MQ=255) aaGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCg < 1:5141735/76‑1 (MQ=255) gagGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCa > 2:8898619/1‑76 (MQ=255) gagGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCa < 1:1627850/76‑1 (MQ=255) agGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCAt > 1:401533/1‑76 (MQ=255) agGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCAt < 1:8893897/76‑1 (MQ=255) agGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCAt > 2:2428185/1‑76 (MQ=255) ggAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCAtt < 2:9425943/76‑1 (MQ=255) gAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCAttt < 1:7417048/76‑1 (MQ=255) gAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCAttt < 1:8560486/76‑1 (MQ=255) gAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCAttt > 2:463910/1‑76 (MQ=255) gAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCAttt < 2:1448583/76‑1 (MQ=255) aaagaaagAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTa < 1:10078923/76‑1 (MQ=255) aaagaaagAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTa < 2:5111002/76‑1 (MQ=255) aaagaaagAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTa > 2:9644174/1‑76 (MQ=255) aaagaaagAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTa > 1:3414758/1‑76 (MQ=255) aagaaagaAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTAt < 2:9199779/76‑1 (MQ=255) agaaagaaGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATg < 1:4358693/76‑1 (MQ=255) aaagaaGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGtt < 1:5459257/76‑1 (MQ=255) aaagaaGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGtt < 2:5731751/76‑1 (MQ=255) aaagaaGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGtt < 1:4510100/76‑1 (MQ=255) agaagGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTa < 2:211121/76‑1 (MQ=255) agaagGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTa < 1:4005849/76‑1 (MQ=255) aagGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTaaa < 1:10153265/76‑1 (MQ=255) aagGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTaaa > 2:8761952/1‑76 (MQ=255) aagGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTaaa > 2:1062394/1‑76 (MQ=255) gCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAAt < 2:7464738/76‑1 (MQ=255) tGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTTAATAATTCGCATTTTATGTTTAAAAATTg < 1:6196393/76‑1 (MQ=255) tGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTg < 2:3053157/76‑1 (MQ=255) tGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTg < 2:444435/76‑1 (MQ=255) cGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTgag > 1:9464056/1‑76 (MQ=255) cGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTgag > 1:2930004/1‑76 (MQ=255) cGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTgag < 1:3369350/76‑1 (MQ=255) gTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTgaga > 1:6474354/1‑76 (MQ=255) ttAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGat < 1:2051324/76‑1 (MQ=40) ttAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGat > 2:752039/1‑76 (MQ=40) tAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGata > 2:6758231/1‑76 (MQ=39) tAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGata > 1:8815047/1‑76 (MQ=39) tAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGata > 1:8401478/1‑76 (MQ=39) aaaCACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGatat < 1:2622709/76‑1 (MQ=38) aaaCACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGatat > 1:7933807/1‑76 (MQ=38) cacaGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTcc < 2:10137780/76‑1 (MQ=32) acaGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCt < 2:7596520/76‑1 (MQ=31) ttCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTGAAGCTGtttttt < 1:7838686/76‑1 (MQ=31) ttCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTGAAGCTGtttttt > 1:7606508/1‑76 (MQ=31) ttCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTGAAGCTGtttttt > 1:6991202/1‑76 (MQ=31) ttCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTGAAGCTGtttttt < 2:10302791/76‑1 (MQ=31) tCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTGAAGCTGTTTTTTa < 2:171287/76‑1 (MQ=32) tCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTGAAGCTGTTTTTTa > 1:8931880/1‑76 (MQ=32) cACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTGAAGCTGTTTTTTAt < 1:7689738/76‑1 (MQ=34) cACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTGAAGCTGTTTTTTAt > 2:5508932/1‑76 (MQ=34) aCTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTGAAGCTGTTTTTTAtt < 2:8305776/76‑1 (MQ=32) aCTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTGAAGCTGTTTTTTAtt < 1:7465613/76‑1 (MQ=32) aCTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTGAAGCTGTTTTTTAtt < 1:5547524/76‑1 (MQ=32) aCTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTGAAGCTGTTTTTTAtt < 2:7262331/76‑1 (MQ=32) cTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTGAAGCTGTTTTTTATTg < 2:5211037/76‑1 (MQ=31) | TTGCAAAGACATTAAGGGTGAAGAGGAAAAGAAAGAAGGCTGCGTTAAACACAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTCATTACCTGAAGCTGTTTTTTATTG > REL606/1506183‑1506333 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |