| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | REL606 | 340,408 | (GC)6→5 | coding (682‑683/948 nt) | mhpR ← | DNA‑binding transcriptional activator, 3HPP‑binding |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | REL606 | 340,398 | 0 | G | . | 98.3% | 553.6 / 1.2 | 115 | coding (693/948 nt) | mhpR | DNA‑binding transcriptional activator, 3HPP‑binding |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base . (62/51); total (63/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| * | REL606 | 340,399 | 0 | C | . | 97.4% | 543.6 / 3.4 | 115 | coding (692/948 nt) | mhpR | DNA‑binding transcriptional activator, 3HPP‑binding |
| Reads supporting (aligned to +/- strand): ref base C (1/2); new base . (62/50); total (63/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 144 total aligned reads displayed.
GCGCAGCGGTACGGCGATAGAGGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTTGCGCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATAGTCA‑TCACCGGGGCGG > REL606/340323‑340467 || gcgcAGCGGTACGGCGATAGAGGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTTg < 2:4179160/76‑1 (MQ=255)gcgcAGCGGTACGGCGATAGAGGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTTg < 1:1265246/76‑1 (MQ=255)gcgcAGCGGTACGGCGATAGAGGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTTg < 2:4764806/76‑1 (MQ=255)gcgcAGCGGTACGGCGATAGAGGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTTg < 2:196550/76‑1 (MQ=255)gcgcAGCGGTACGGCGATAGAGGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTTg < 1:3024103/76‑1 (MQ=255) aGCGGTACGGCGATAGAGGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTTgcgcg > 1:691069/1‑76 (MQ=255) aGCGGTACGGCGATAGAGGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTTgcgcg > 2:5480707/1‑76 (MQ=255) aGCGGTACGGCGATAGAGGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTTgcgcg > 1:3233132/1‑76 (MQ=255) aGCGGTACGGCGATAGAGGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTTccgcg > 1:3391873/1‑76 (MQ=255) ggTACGGCGATAGAGGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTTgcgcgcgc > 1:4641428/1‑76 (MQ=255) ggTACGGCGATAGAGGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTTgcgcgcgc < 2:1959274/76‑1 (MQ=255) aCGGCGATAGAGGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTTgcgcgcgcgcc > 1:117242/1‑75 (MQ=255) aCGGCGATAGAGGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTTgcgcgcgcgcc > 1:2529494/1‑75 (MQ=255) cGGCGATAGAGGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTTgcgcgcgcgcca < 1:705646/76‑3 (MQ=255) cGGCGATAGAGGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTTgcgcgcgcgcca < 2:6139081/76‑3 (MQ=255) ggCGATAGAGGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTTgcgcgcgcgccag > 2:584617/1‑73 (MQ=255) ggCGATAGAGGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTTgcgcgcgcgccag < 2:234809/76‑4 (MQ=255) ggCGATAGAGGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTTgcgcgcgcgccag > 1:783744/1‑73 (MQ=255) tAGAGGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATgg > 1:4052789/1‑76 (MQ=255) agagGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGc > 2:2817119/1‑76 (MQ=255) agagGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGc > 1:950932/1‑76 (MQ=255) agGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCtt < 2:1648191/76‑1 (MQ=255) ggCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTc < 1:5026026/76‑1 (MQ=255) gCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTcc > 1:4791937/1‑76 (MQ=255) gATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTcccg > 1:112392/1‑74 (MQ=255) gATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAg > 2:3799929/1‑76 (MQ=255) aTCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGc > 2:687890/1‑76 (MQ=255) aTCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGc > 2:4072306/1‑76 (MQ=255) cttctCCTCTTGACCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCtt < 2:2091898/76‑1 (MQ=255) cttctCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTTCAGCtt > 1:837982/1‑76 (MQ=255) cttctCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCtt < 1:3863407/76‑1 (MQ=255) cttctCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCtt < 2:2840898/76‑1 (MQ=255) cttctCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCtt > 1:5380946/1‑76 (MQ=255) ttctCCTCCTGGTCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCttt < 1:4404334/76‑1 (MQ=255) ttctCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTTGCGCG‑G‑GCGCCAGAATGGCTTCCAGGttt > 2:5135301/1‑76 (MQ=255) ttctCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCttt < 1:2272662/76‑1 (MQ=255) tctcCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGGATGGCTTACAGCtttt > 1:2261380/1‑75 (MQ=255) tctcCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTa < 1:3633925/76‑1 (MQ=255) tctcCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTa < 2:53781/76‑1 (MQ=255) tctcCTCCTGACCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCACGCCAGAATGGCTTCCAGCTTTa < 1:2478191/76‑1 (MQ=255) tctcCACGTGATCCCAGCCGCGGTAGTTCTGTCCGTCACCCTC‑‑TGTGCGCGCGCGCCAGAATGGCTTCCAGCTTTa < 2:5500649/76‑1 (MQ=255) tcccctcctGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTa < 1:2756377/73‑1 (MQ=255) ctcctcCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTaa < 2:690369/76‑1 (MQ=255) ctcctcCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTaa > 1:4608343/1‑76 (MQ=255) ctccgcCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTaa < 2:2056126/76‑1 (MQ=255) tcctccTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAAc < 1:3412608/76‑1 (MQ=255) ccctcctGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAAc < 2:188021/75‑1 (MQ=255) cctcctGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCCGCTTTAACg > 1:451749/1‑76 (MQ=255) cctcctGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACg > 1:5503847/1‑76 (MQ=255) cctcctGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACg > 1:3978633/1‑76 (MQ=255) tcctGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAAAGGt > 1:5199736/1‑76 (MQ=255) ctGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTTCAGGTTTAAAGGGTc > 2:2485842/1‑76 (MQ=255) ctGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTCACGGtgc > 2:2325637/1‑74 (MQ=255) ctGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTc > 1:1059140/1‑76 (MQ=255) tGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTcc < 1:3763244/76‑1 (MQ=255) tGAGCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTcc < 2:2423922/76‑1 (MQ=255) aTCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCg > 2:595730/1‑76 (MQ=255) cccAGCCGCGGTAGTTCTGTCCGTAACCTTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTg < 1:6229328/76‑1 (MQ=255) ccAGCCGCGGTATTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGc < 2:5809306/76‑1 (MQ=255) cAGCCGCGTTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGcc < 2:3702218/76‑1 (MQ=255) aGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCCGCTTTAACGGTTCCCATGCCa > 2:4017978/1‑76 (MQ=255) aGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCCGCGTTAACGGGTCCCCTGccc > 1:3571812/1‑75 (MQ=255) aGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCa < 2:37371/76‑1 (MQ=255) aGCCGCGGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCAAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCa < 2:5209803/76‑1 (MQ=255) gcgGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTg < 2:1166363/76‑1 (MQ=255) gcgGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTg < 2:6176402/76‑1 (MQ=255) gcgGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTg < 2:6003600/76‑1 (MQ=255) gcgGTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCCTGCCAGTTg > 2:5017229/1‑76 (MQ=255) ggTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGAt > 2:2563303/1‑76 (MQ=255) gTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGCTa > 1:1045167/1‑76 (MQ=255) gTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATa < 2:3578091/76‑1 (MQ=255) gTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATa > 1:6167122/1‑76 (MQ=255) gTAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATa > 1:4321085/1‑76 (MQ=255) tAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATAg > 1:4611018/1‑76 (MQ=255) tAGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATAg < 1:1611016/76‑1 (MQ=255) aGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCCGTTGATAGt > 2:4815735/1‑76 (MQ=255) aGTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGGTGATAgg > 2:480062/1‑75 (MQ=255) gTTCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATAGtc < 1:6263226/76‑1 (MQ=255) ttCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATAGtca < 2:2995897/76‑1 (MQ=255) ttCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATAGtca < 1:2316567/76‑1 (MQ=255) tCTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATAGtca‑t > 1:4391185/1‑76 (MQ=255) cTGTCCGTAGCCCTCTTTGCGCGCGCGCAC‑‑GAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATAGtca‑tc < 2:2553322/76‑1 (MQ=255) cTGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCACTTGATAGtaa‑tt > 1:3382951/1‑75 (MQ=255) tGTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGGGCCAGTTGATAGgcagcc > 1:450493/1‑73 (MQ=255) gTCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATAGTCA‑TCAc > 2:1891068/1‑76 (MQ=255) tCCGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATAGTCA‑TCAcc < 2:4052789/76‑1 (MQ=255) ccGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATAGTCA‑TCACCg > 2:4709590/1‑76 (MQ=255) cGTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATAGTCA‑TCACCgg < 1:4544313/76‑1 (MQ=255) gTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATAGTCA‑TCACCggg < 1:4708967/76‑1 (MQ=255) gTAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGCTGATAGTCA‑TCACCggg > 1:3279573/1‑76 (MQ=255) tAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATAGTCA‑TCACCgggg < 1:1655260/76‑1 (MQ=255) tAACCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGGGCCAGTTGATAGTCA‑TCACCgggg > 2:1491408/1‑76 (MQ=255) aaCCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCCGTTGATAGTCA‑TCACCGGGGc > 2:6050504/1‑76 (MQ=255) aaCCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCCGGTTATAGGCATTCACCgggg > 2:4802298/1‑76 (MQ=255) aaCCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATAGTCA‑TCACCGGGGc < 2:3324990/76‑1 (MQ=255) aaCCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATAGTCA‑TCACCGGGGc > 1:4582667/1‑76 (MQ=255) aaCCCTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAAAGGTTCCCCTGCCAGTTGATAATTA‑TCACCGGGGc > 2:1401506/1‑76 (MQ=255) cccTCTTT‑‑GCGCGCGCGCCTGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATAGTCA‑TCACCGGGGCgg < 2:506194/76‑1 (MQ=255) cccTCTTT‑‑GCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATAGTCA‑TCACCGGGGCgg < 2:2116591/76‑1 (MQ=255) cccTCTTT‑‑GCGCGCGCGCAAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATAGTCA‑TCACCGGGGCgg < 2:5073197/76‑1 (MQ=255) || GCGCAGCGGTACGGCGATAGAGGCGATCTTCTCCTCCTGATCCCAGCCGCGGTAGTTCTGTCCGTAACCCTCTTTGCGCGCGCGCGCCAGAATGGCTTCCAGCTTTAACGGTTCCCGTGCCAGTTGATAGTCA‑TCACCGGGGCGG > REL606/340323‑340467 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |