| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 422,600 | (G)7→10 | intergenic (‑287/+175) | cyoA ← / ← ampG | cytochrome o ubiquinol oxidase subunit II/muropeptide transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 422593 | 6 (0.030) | 169 (0.920) +GGG |
82/130 | 0.3 | 96.5% | intergenic (‑280/+182) | cyoA/ampG | cytochrome o ubiquinol oxidase subunit II/muropeptide transporter |
| ? | REL606 | 422594 = | 6 (0.030) | intergenic (‑281/+181) | cyoA/ampG | cytochrome o ubiquinol oxidase subunit II/muropeptide transporter | |||||
Only 100 of 184 total aligned reads displayed.
ACGGGCAATTGGTATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/422519‑422593‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAATTGCGTCAATAATTTCC > REL606/422594‑422668 ||| CGGGCAATTGGTATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGG < 1:6045397/76‑1 GGGCAATTGGTATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGG < 1:4851223/76‑1 GGGCAATTGGTATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGG < 1:5224294/76‑1 GGCAATTGGTATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGG < 2:4871999/76‑1 GCAATTGGTATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGG < 1:2328864/76‑1 GCAATTGGTATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGG > 1:4032945/1‑76 CAATTGGTATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGG > 1:549131/1‑76 AATTGGTATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGG < 2:856059/76‑1 AATTGGTATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGG < 2:6048748/76‑1 ttaGTATAGCCAATCTGGAATAAAACAATTGTTTAACAAATAAGTATGATTATGGTGACAATTGGGGGGGGGGGGG < 2:6126690/73‑1 TTGGTATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGGGG < 1:3623194/76‑1 TGGTATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGGGGa < 1:2810277/76‑2 TGGTATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGGGGa > 1:321911/1‑75 GGTATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGGGGaa < 2:115949/76‑3 GGTATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGGGGaa > 1:749571/1‑74 GGTATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGGGGaa < 1:5407857/76‑3 TATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGGGGAAAA > 2:3822037/1‑76 TATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGGGGAAAA > 2:17307/1‑76 TATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGGGGAAAA > 2:2051636/1‑76 TATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGGGGAAAA > 1:410004/1‑76 ATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGGGGAAAAt > 2:1540790/1‑75 ATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGGGGAAAAt < 1:515495/76‑2 ATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGGGGAAAAt > 2:3755391/1‑75 TAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATA > 2:1069637/1‑76 TAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATA < 1:1164579/76‑1 AACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGGGGGGAAATA > 1:5097792/1‑76 AACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAA < 2:2795078/76‑1 AACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAA > 2:3883397/1‑76 ACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAA < 1:6136744/76‑1 ACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAA < 2:4283806/76‑1 CCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAG < 1:613911/76‑1 ATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACT < 2:624835/76‑1 TCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTC < 2:3490174/76‑1 TCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTC > 2:2624575/1‑76 CTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCA > 1:2027871/1‑76 TGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTTAT > 1:1366293/1‑76 GGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATT > 1:1486099/1‑76 GGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATT > 2:3281957/1‑76 GAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTA < 1:3490695/76‑1 GAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTA < 1:3770687/76‑1 TAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCT > 1:773987/1‑76 TAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCT < 2:5895150/76‑1 AAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTG < 1:436976/76‑1 AACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAA < 2:4176663/76‑1 AACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAA < 2:5704129/76‑1 CAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATC < 2:4436876/76‑1 AATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGGGGGAAAATAAAGACTCATTAGCTGAATC > 1:2205306/1‑76 AATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCG > 2:2510837/1‑76 TTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTG > 2:2568929/1‑76 TGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGT > 2:2911117/1‑76 GTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTA < 2:773987/76‑1 TTTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAA < 2:3985344/76‑1 TTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAG > 2:363059/1‑76 TTAACAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAG > 1:1191661/1‑76 tgACAAATGATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGGCTCATTAGCTGAATCGTGTAAGA < 2:1801952/74‑1 CAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAA > 2:2977913/1‑76 CAAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAA > 1:3820715/1‑76 AAATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAA > 2:5359873/1‑76 AATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAA > 1:4568782/1‑76 AATAATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAA > 2:1649521/1‑76 AATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAG > 2:5781474/1‑76 AATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAG > 1:5667328/1‑76 AATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAG < 1:1339849/76‑1 ATTATCATTATGGTGACAATTGGGTGGGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAAAAG > 2:2769896/1‑76 ATTATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGA > 1:586351/1‑76 ATTATCATTATGGTGACAATTGGG‑GGGGGGGGGGAAAATAAAGACTCATTAGCTTAATCGTGTAAGAAAAAATAGA > 1:3106813/1‑76 TATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAAT < 2:5864373/76‑1 TATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAAT > 1:2500971/1‑76 ATCATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATT > 1:4100353/1‑76 CATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCA > 1:3592195/1‑76 CATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCA > 1:489762/1‑76 CATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGGGTAAGAAAAAAAAGAATTCA > 1:1536177/1‑76 ATTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCAT < 1:1837222/76‑1 TTATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATA < 1:2911117/76‑1 TATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAA > 1:3877620/1‑76 TATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAA > 1:6160768/1‑76 tgGGTGAGAATGGGGGGGGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAA < 2:2108423/74‑1 ATGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAA > 2:561182/1‑76 TGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAAT < 2:1813303/76‑1 TGGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCCGAATCGTGTAAGAAAAAATAGAATTCCTAAAT > 2:3158340/1‑76 GGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAATT < 1:593933/76‑1 GGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAATT < 2:2873753/76‑1 GGTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTAATAAATT > 2:3044940/1‑76 GTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAATTG > 2:5669442/1‑76 GTGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAATTG < 2:5422486/76‑1 TGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAATTGC > 1:4071751/1‑76 TGACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAATTGC < 2:5298312/76‑1 ACAATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAATTGCGT > 2:1697491/1‑76 AATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAATTGCGTCA > 1:2620439/1‑76 AATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAATTGCGTCA > 1:1575508/1‑76 ATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAATTGCGTCAA > 1:4013878/1‑76 ATTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAATTGCGTCAA > 1:2704445/1‑76 TTGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAATTGCGTCAAT < 2:4978679/76‑1 TGGGT‑GGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAATTGCGTCAATA < 1:1821459/76‑1 ggtGGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAATTGCGTCAATAAT < 1:1126215/73‑1 ggtGGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAATTGCGTCAATAAT < 1:838718/73‑1 gtGGGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAATTGCGTCAATAATT > 1:3281093/3‑76 GGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAATTGCGTCAATAATTTCC < 2:55990/76‑1 GGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAATTGCGTCAATAATTTCC > 2:2269899/1‑76 GGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAATTGCGTCAATAATTTCC > 1:3788961/1‑76 ||| ACGGGCAATTGGTATAACCAATCTGGAATAAAACAATTGTTTAACAAATAATTATCATTATGGTGACAATTGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/422519‑422593‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAAATAGAATTCATAAATTGCGTCAATAATTTCC > REL606/422594‑422668 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |