| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | REL606 | 1,448,469 | A→G | intergenic (+13/‑3) | ynbB → / → ynbC | predicted CDP‑diglyceride synthase/predicted hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | REL606 | 1,448,469 | 0 | A | G | 98.8% | 701.1 / ‑3.4 | 169 | intergenic (+13/‑3) | ynbB/ynbC | predicted CDP‑diglyceride synthase/predicted hydrolase |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (98/68); total (100/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 176 total aligned reads displayed.
TGACTCATTAATTTTCACCGCTCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGAAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCGTTGTTTTATCGG > REL606/1448396‑1448540 | tGACTCATTAATTTTCACCGCTCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGgaa < 1:1616866/76‑1 (MQ=255) aCTCATTAATTTTCACCGCTCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAAt > 1:167054/1‑76 (MQ=255) aCTCATTAATTTTCACCGCTCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAAt < 1:4707153/76‑1 (MQ=255) cATTAATTTTCACCGCTCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGa < 1:2795485/76‑1 (MQ=255) aTTAATTTTCACCGCTCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGaa < 2:1556791/76‑1 (MQ=255) ttAATTTTCACCGCTCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGaaa > 2:970598/1‑76 (MQ=255) tAATTTTCACCGCTCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGCAATGGaaaa > 2:898880/1‑76 (MQ=255) aaTTTTCACCGCTCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGCGGAAATGGAAAAt > 2:1257414/1‑76 (MQ=255) aTTTTCACCGCTCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAAtt > 1:4048909/1‑76 (MQ=255) tttCACCGCTCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCa > 2:770121/1‑76 (MQ=255) tttCACCGCTCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCa > 1:5944310/1‑76 (MQ=255) tttCACCGCTCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCa > 2:1185669/1‑76 (MQ=255) tttCACCGCTCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCa < 2:2708081/76‑1 (MQ=255) ttCACCGCTCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCAc < 2:6304686/76‑1 (MQ=255) tCACCGCTCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACg > 1:3851984/1‑76 (MQ=255) tCACCGCTCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACg < 2:4047515/76‑1 (MQ=255) tCACCGCTCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACg > 1:1714167/1‑76 (MQ=255) cACCGCTCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGc > 1:1796612/1‑76 (MQ=255) aCCGCTCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCa < 1:3428373/76‑1 (MQ=255) tCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCt > 2:2074436/1‑76 (MQ=255) ccGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTg < 1:6307123/76‑1 (MQ=255) ccGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTg < 2:4547125/76‑1 (MQ=255) cGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTgg > 1:559070/1‑76 (MQ=255) ggTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTggg < 2:2386275/76‑1 (MQ=255) ggTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTggg > 2:3184989/1‑76 (MQ=255) ggTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTggg < 1:757750/76‑1 (MQ=255) gTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTgggg > 2:2464089/1‑76 (MQ=255) tgtttttttATTTTATACAGTACTGCTGTTACTGAAGGACTATAGAGGAACTGGACAATTCACGCATACGTGGGGa > 2:3010315/3‑76 (MQ=255) aTTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGaa < 1:1257414/76‑1 (MQ=255) ttttttATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACa > 1:5397107/1‑76 (MQ=255) ttttttATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACa > 1:5531966/1‑76 (MQ=255) tttttATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACAt < 1:3742947/76‑1 (MQ=255) tttttATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACAt < 2:146388/76‑1 (MQ=255) tttttATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACAt > 1:887809/1‑76 (MQ=255) ttttattttaTACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACAtt > 1:196094/1‑76 (MQ=255) ttttattttaTACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACAtt > 1:3482955/1‑76 (MQ=255) ttattttatACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACAtttt > 1:1033442/1‑76 (MQ=255) ttattttatACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACAtttt > 1:5734444/1‑76 (MQ=255) attttatACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACAtttttt > 2:4400899/1‑76 (MQ=255) attttatACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACAtttttt < 2:355365/76‑1 (MQ=255) tttatACTCTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTa < 2:4033400/76‑1 (MQ=255) ttatACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTac > 2:2289136/1‑76 (MQ=255) ttatACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTac < 1:187808/76‑1 (MQ=255) ttatACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTac > 1:5892943/1‑76 (MQ=255) ttatACACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTac > 1:5127293/1‑76 (MQ=255) ttatACACTACTGCTGTTACTGAAGGAAAATAGAGAAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTac > 1:3070678/1‑76 (MQ=255) tataCACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTacc > 1:2709407/1‑76 (MQ=255) tataCACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTacc > 1:481811/1‑76 (MQ=255) ataCACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTacca > 1:2519966/1‑76 (MQ=255) ataCACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTacca > 1:4142771/1‑76 (MQ=255) ataCACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTacca < 1:520577/76‑1 (MQ=255) ataCACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTacca > 1:4581685/1‑76 (MQ=255) taCACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTaccac > 2:3629805/1‑76 (MQ=255) taCACTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTaccac > 1:831562/1‑76 (MQ=255) acacTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTaccacc > 2:4017255/1‑76 (MQ=255) acacTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTaccacc < 2:749739/76‑1 (MQ=255) cacTCCTGCTGTTACTGATTGAAAATAGAGTAATGGGAAAATTCACGCATCCCTGGGGAACATTTTTTTAcaacca > 2:4564804/1‑76 (MQ=255) cacTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTAccacca > 1:5432609/1‑76 (MQ=255) cacTACTGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTAccacca > 1:2669648/1‑76 (MQ=255) actactGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAg > 1:3559496/1‑76 (MQ=255) actactGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAg < 1:3255198/76‑1 (MQ=255) tactGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTg > 1:3529303/1‑76 (MQ=255) tactGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTg > 1:4002956/1‑76 (MQ=255) tactGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTg < 1:2211325/76‑1 (MQ=255) actGCTGTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGa > 2:5917769/1‑76 (MQ=255) ctgctgTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGat > 2:4233217/1‑76 (MQ=255) ctgctgTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGat > 1:2514104/1‑76 (MQ=255) ctgctgTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGat < 2:2573129/76‑1 (MQ=255) ctgctgTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGat > 1:2858526/1‑76 (MQ=255) ctgctgTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGat > 1:2929056/1‑76 (MQ=255) ctgctgTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACAAGGGat > 2:1378541/1‑76 (MQ=255) tgctgTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGata > 1:1348194/1‑76 (MQ=255) tgctgTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGata > 1:6196439/1‑76 (MQ=255) gctgTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGataa > 2:6025238/1‑76 (MQ=255) gctgTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGataa < 1:2756036/76‑1 (MQ=255) gctgTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGataa > 1:3652407/1‑76 (MQ=255) gctgTTACTGAAGGAAAATAGAGAAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCCCCAGTGataa < 2:5482577/76‑1 (MQ=255) ctgTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGataat < 2:5104495/76‑1 (MQ=255) tgTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGataata > 1:5685512/1‑76 (MQ=255) tgTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGataata > 2:244325/1‑76 (MQ=255) gTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATAc < 2:3720382/76‑1 (MQ=255) gTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATAc < 2:3459527/76‑1 (MQ=255) gTTACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATAc < 1:1818807/76‑1 (MQ=255) ttACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACa < 1:3378705/76‑1 (MQ=255) ttACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACa > 2:2625318/1‑76 (MQ=255) ttACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACa > 2:1919503/1‑76 (MQ=255) tACTGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAg < 2:3513511/76‑1 (MQ=255) aCTGAAGGAAAATAGAGAAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGc > 1:879708/1‑76 (MQ=255) tGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCgt > 2:4123346/1‑76 (MQ=255) tGAAGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCgt > 1:2426350/1‑76 (MQ=255) aaGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCgttg < 1:3612557/76‑1 (MQ=255) aaGGAAAATAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCgttg > 2:2079066/1‑76 (MQ=255) aaaaTAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCGTTGtttt > 1:3464420/1‑76 (MQ=255) aaaaTAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCGTTGtttt < 1:6021477/76‑1 (MQ=255) aaaaTAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCGTTGtttt < 1:2371903/76‑1 (MQ=255) aaaTAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCGTTGTTTTa < 2:2906071/76‑1 (MQ=255) tAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCGTTGTTTTATCg > 2:4876409/1‑76 (MQ=255) tAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCGTTGTTTTATCg < 2:810827/76‑1 (MQ=255) tAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCGTTGTTTTATCg > 2:4103113/1‑76 (MQ=255) tAGAGGAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCGTTGTTTTATCg > 2:3979468/1‑76 (MQ=255) | TGACTCATTAATTTTCACCGCTCCGGTATTTTTTTATTTTATACACTACTGCTGTTACTGAAGGAAAATAGAGAAAATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCGTTGTTTTATCGG > REL606/1448396‑1448540 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |