| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 1699810 = | 319 (1.180) | 5 (0.020) | 5/128 | 18.6 | 1.8% | coding (496/2013 nt) | ydhK | conserved inner membrane protein |
| ? | REL606 | = 1699806 | 283 (1.230) | coding (492/2013 nt) | ydhK | conserved inner membrane protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 328 total aligned reads displayed.
GAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGACTAC > REL606/1699735‑1699885 | gAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCatga < 2:7019541/76‑1 (MQ=255)gAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCatga > 1:5670841/1‑76 (MQ=255) aGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCatgat < 2:127565/76‑1 (MQ=255) aGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCatgat < 1:2165763/76‑1 (MQ=255) aGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCatgat > 2:2815052/1‑76 (MQ=255) ggCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCatgatg < 1:736332/76‑1 (MQ=255) ccagccagCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCatgatgat > 2:5824104/1‑76 (MQ=255) cagccagcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCatgatgatg > 2:8044229/1‑76 (MQ=255) ccagcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCatgatgatgatg > 1:5184563/1‑76 (MQ=255) cagcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCAtgatgatgatga > 1:825226/1‑76 (MQ=255) agcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATgatgatgatgat > 1:2289814/1‑76 (MQ=255) gcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATc > 2:6285455/1‑76 (MQ=255) gcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCAGCATTTTGTGCGGCGGCATGATGATGATGATc < 1:136822/76‑1 (MQ=255) cTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATcc > 2:5230633/1‑76 (MQ=255) tgtgGGATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCt > 2:2699471/1‑76 (MQ=255) tgtgGGATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCt < 1:3394012/76‑1 (MQ=255) tgGGACATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGc > 2:6077867/1‑76 (MQ=255) gggATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGcc > 2:2290673/1‑76 (MQ=255) gggATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGcc < 1:2988864/76‑1 (MQ=255) gggATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGcc > 1:3723646/1‑76 (MQ=255) gATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTa < 1:679986/76‑1 (MQ=255) gATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTa < 2:933852/76‑1 (MQ=255) atatCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAg > 1:1765422/1‑76 (MQ=255) tatCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGc < 2:8310398/76‑1 (MQ=255) tatCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGc > 1:241315/1‑76 (MQ=255) tatCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGc < 1:577290/76‑1 (MQ=255) tatCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGc < 1:8016024/76‑1 (MQ=255) atCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCa > 2:8166566/1‑76 (MQ=255) tCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAg < 2:8503392/76‑1 (MQ=255) cGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGt > 2:2463228/1‑76 (MQ=255) gCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGtt > 1:7154832/1‑76 (MQ=255) gCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGtt < 1:7030013/76‑1 (MQ=255) cTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTc > 1:4380038/1‑76 (MQ=255) cTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTc > 2:152844/1‑76 (MQ=255) cTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTc > 2:4920544/1‑76 (MQ=255) cTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTc > 2:8816135/1‑76 (MQ=255) tCAGGCACGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTcc > 2:2166499/1‑76 (MQ=255) cAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCg > 2:7252522/1‑76 (MQ=255) cAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCg > 2:1037033/1‑76 (MQ=255) cAGCCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCg < 2:7396781/76‑1 (MQ=255) cgcgcgTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGc > 2:3206284/1‑76 (MQ=255) cgcgcgTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGc > 1:322014/1‑76 (MQ=255) gcgcgTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCt < 2:5705426/76‑1 (MQ=255) cgcgTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTa > 1:6487420/1‑76 (MQ=255) cgcgTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTa < 1:3972319/76‑1 (MQ=255) cgcgTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTa > 1:1808412/1‑76 (MQ=255) cgcgTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTa > 2:4667302/1‑76 (MQ=255) gcgTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTAc < 1:7733180/76‑1 (MQ=255) gcgTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTAc > 2:2088148/1‑76 (MQ=255) gcgTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTAc > 2:6874572/1‑76 (MQ=255) gcgTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTAc < 2:8637191/76‑1 (MQ=255) cgTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACa < 2:3929525/76‑1 (MQ=255) cgTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACa < 2:2003891/76‑1 (MQ=255) gTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAg > 2:5277501/1‑76 (MQ=255) gTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAg < 2:3744521/76‑1 (MQ=255) tttGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGc < 1:7500436/76‑1 (MQ=255) tGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGccc > 1:499772/1‑76 (MQ=255) cGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCtt > 1:993299/1‑76 (MQ=255) cGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCtt > 2:359340/1‑76 (MQ=255) aGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCtttt < 2:167251/76‑1 (MQ=255) ggTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTa < 2:3760044/76‑1 (MQ=255) gTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTaa < 1:3426724/76‑1 (MQ=255) gATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAAcc < 2:6339715/76‑1 (MQ=255) ttGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGc > 2:5428614/1‑76 (MQ=255) ttGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGc < 2:7431152/76‑1 (MQ=255) gTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAAACGCAt > 2:1398164/1‑76 (MQ=255) gTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAAACGCAt > 2:4605393/1‑76 (MQ=255) tCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCAtt < 1:943695/76‑1 (MQ=255) cGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTg > 1:6019443/1‑76 (MQ=255) gCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGaa > 1:1425610/1‑76 (MQ=255) aTTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGaaaa < 1:528937/76‑1 (MQ=255) aTTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGaaaa > 2:8350427/1‑76 (MQ=255) ttttGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGaaaaa < 2:553353/76‑1 (MQ=255) ttttGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGaaaaa > 2:7864400/1‑76 (MQ=255) tttGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAAc > 1:1001439/1‑76 (MQ=255) tttGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAAc < 1:5429384/76‑1 (MQ=255) gtgCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATg > 2:3066353/1‑76 (MQ=255) tgCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGc > 1:1960905/1‑76 (MQ=255) tgCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGc > 1:2749776/1‑76 (MQ=255) gcggcgGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCa < 2:4411242/76‑1 (MQ=255) cggcATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACGcc > 1:4519734/1‑76 (MQ=255) ggcATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACGccc < 1:8674120/76‑1 (MQ=255) ggcATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACGccc < 1:6359103/76‑1 (MQ=255) ggcATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACGccc > 1:2464848/1‑76 (MQ=255) gcATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACGCCCg < 1:1136603/76‑1 (MQ=255) cATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGa > 2:6007635/1‑76 (MQ=255) cATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGa < 1:8520655/76‑1 (MQ=255) cATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGa < 1:4693577/76‑1 (MQ=255) cATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGa > 1:1860482/1‑76 (MQ=255) atgatgatgatgATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGac > 2:8699559/1‑76 (MQ=255) atgatgatgatgATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGac > 1:7827485/1‑76 (MQ=255) atgatgatgatgATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGac > 2:6486670/1‑76 (MQ=255) atgatgatgatgATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACACCCGac > 1:1601916/1‑76 (MQ=255) atgataatgatgATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGac < 2:1130546/76‑1 (MQ=255) tgatgatgatgaTCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGact > 1:4281483/1‑76 (MQ=255) tgatgatgatgaTCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGact < 2:4749765/76‑1 (MQ=255) tgatgatgatgaTCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGact > 1:1203903/1‑76 (MQ=255) gatgatgatgatCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGacta < 2:7528387/76‑1 (MQ=255) gatgatgatgatCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGacta < 2:7122089/76‑1 (MQ=255) atgatgatgatCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGactac > 1:2662708/1‑76 (MQ=255) | GAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTGATTGTCGGCATTTTGTGCGGCGGCATGATGATGATGATCCTGCCTAGCAGTTCCGATGCTACAGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGACTAC > REL606/1699735‑1699885 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |