| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 379585 | 407 (1.510) | 197 (0.730) | 6/150 | 19.4 | 28.9% | intergenic (+110/+135) | yajF/araJ | fructokinase/predicted transporter |
| ? | REL606 | = 2583282 | 562 (2.080) | coding (741/741 nt) | yfhQ | predicted methyltransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 562 total aligned reads displayed.
GCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTT > REL606/2583208‑2583357 | ccTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGttg > 2:3113004/1‑75 (MQ=14) cTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAt < 2:2700975/76‑1 (MQ=34) ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAtt < 1:5459451/76‑1 (MQ=35) ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAtt < 2:1390525/76‑1 (MQ=35) ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAtt < 1:605511/76‑1 (MQ=35) ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAtt < 1:2580843/76‑1 (MQ=35) ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAtt < 2:2408950/76‑1 (MQ=35) ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTAtt > 1:8132171/1‑76 (MQ=17) ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTAtt > 1:4725658/1‑76 (MQ=17) tATCAGCCCTACGGTTCTGTTCACTGTAGGCCTGATAAGAGGCATTACGCGTCGCATCAGGCAACGGCTGTTATTc < 2:1235866/76‑1 (MQ=11) aTCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCg < 1:1475123/76‑1 (MQ=39) tCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCgg < 2:8086219/76‑1 (MQ=40) tCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCgg < 1:6512973/76‑1 (MQ=40) ccGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGc > 2:3546376/1‑76 (MQ=255) ccGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGc < 2:8261433/76‑1 (MQ=255) gcccTAGGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCt < 2:6581394/74‑1 (MQ=255) gcccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCt < 1:8055790/74‑1 (MQ=255) cccTACGGTTCTTTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCtt < 1:3806836/75‑1 (MQ=255) cccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCtt < 2:3376108/75‑1 (MQ=255) cccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCtt < 2:3431296/75‑1 (MQ=255) acatACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCtt < 2:6709025/73‑1 (MQ=255) ccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTg < 2:1797129/76‑1 (MQ=255) ccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTg < 1:57009/76‑1 (MQ=255) ccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTg < 2:5931971/76‑1 (MQ=255) cTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGt < 1:5289658/76‑1 (MQ=255) cTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGt < 1:2904046/76‑1 (MQ=255) cTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGACCTGt > 2:2054301/1‑76 (MQ=255) tACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGtt > 1:2663112/1‑76 (MQ=255) tACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGtt < 2:427707/76‑1 (MQ=255) tACGATTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGtt < 1:8678363/76‑1 (MQ=255) aCGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTa < 2:551395/76‑1 (MQ=255) aCGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTa < 2:2557026/76‑1 (MQ=255) aCGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTa < 2:812574/76‑1 (MQ=255) aCGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTa < 1:5953912/76‑1 (MQ=255) aCGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTa < 2:405602/76‑1 (MQ=255) ttCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCtt < 1:2788662/76‑1 (MQ=255) ttCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCtt < 2:1083530/76‑1 (MQ=255) tCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCTGTCTTGGTTCCttt > 2:5302525/1‑76 (MQ=14) cTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTa < 2:6003475/76‑1 (MQ=255) cTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTa < 2:8726100/76‑1 (MQ=255) cTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATTTGGCCTTGTTACCtttt > 1:710833/1‑75 (MQ=255) tGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTAt < 1:6168792/76‑1 (MQ=255) tGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTAt > 2:5091394/1‑76 (MQ=255) gTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTAtt < 2:3867495/76‑1 (MQ=255) gTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTAtt > 2:7657875/1‑76 (MQ=255) ttCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTc < 2:4935773/76‑1 (MQ=255) tCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTct < 1:706706/76‑1 (MQ=255) tCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTct < 1:6280283/76‑1 (MQ=255) cACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATTCGGGCTTGTTACCTTtcttctt > 2:4541236/1‑75 (MQ=18) cACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATTCGGCCTTGTTACCTTTTTTctt > 2:8437197/1‑75 (MQ=255) tGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgctg > 2:5355652/1‑76 (MQ=255) tGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATTCGGCCTTGTTACCTTTATTctgctg > 2:1545687/1‑76 (MQ=255) gTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATTCGGCCTTGTTACCTTTATTCttctgc > 2:4750847/1‑76 (MQ=255) tAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTgctgct < 2:7551880/76‑1 (MQ=255) aGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTTCCTTTATTCTGCTGCTc > 1:4581201/1‑76 (MQ=255) ggCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCa < 2:6292261/76‑1 (MQ=255) ccTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAAt < 1:1722908/76‑1 (MQ=255) ccTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAAt > 2:7995910/1‑76 (MQ=255) cTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATa > 1:4298417/1‑76 (MQ=255) tGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAg > 1:101649/1‑76 (MQ=255) tGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAg < 2:6160387/76‑1 (MQ=255) tGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCCTGTTACCTTTATTCTGCTGCTCAATAg > 1:4153667/1‑76 (MQ=255) gATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGa < 1:4482737/76‑1 (MQ=255) gATAAGACACATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGa < 2:7170500/76‑1 (MQ=255) aTAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGaa < 1:2285211/76‑1 (MQ=255) aTAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGaa < 2:6420683/76‑1 (MQ=255) tAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATTCGGGCTTGTTACCTTTATTCTGCTGCTCAATAGaaa > 2:2940134/1‑75 (MQ=255) aaGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGTCTTGTTACCTTTATTCTGCTGCTCACAAGAAGc > 2:2183992/1‑76 (MQ=25) aaGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGc > 1:7449066/1‑76 (MQ=255) aGACGCTTTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGcc < 2:227707/76‑1 (MQ=255) aGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGcc < 1:6859797/76‑1 (MQ=255) aGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGcc < 2:8534383/76‑1 (MQ=255) aGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGcc < 1:1907830/76‑1 (MQ=255) aCGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAg > 1:4863986/1‑76 (MQ=255) cATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAAt > 2:7390364/1‑76 (MQ=255) cATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAAt < 1:91359/76‑1 (MQ=255) cATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGACAGAAt > 1:6422476/1‑76 (MQ=255) aTTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATc < 2:3764428/76‑1 (MQ=255) aTTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATc < 2:3712139/76‑1 (MQ=255) ttACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATcc < 1:8909108/76‑1 (MQ=255) ttACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATcc < 1:3330266/76‑1 (MQ=255) tACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATccc > 1:7760685/1‑76 (MQ=255) cgcgTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAAACCcgc > 2:4211634/1‑76 (MQ=255) cgcgTCGCATCAGGCAACGGCTGTTATACGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCcgc > 1:4623907/1‑76 (MQ=255) gcgTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCcgcg < 2:5613485/76‑1 (MQ=255) gTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCCCGCa > 2:8960659/1‑76 (MQ=255) tCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAg < 1:7817956/76‑1 (MQ=255) cGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAgg < 2:3242280/76‑1 (MQ=255) tCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGatat < 1:3473791/76‑1 (MQ=255) gCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCaa < 2:6889195/76‑1 (MQ=255) cAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCCAc > 1:3014507/1‑76 (MQ=255) ggCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCt < 1:3946579/76‑1 (MQ=255) ggCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCt < 1:829189/76‑1 (MQ=255) gCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTg < 1:6732695/76‑1 (MQ=255) cTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTgg < 1:8390227/76‑1 (MQ=255) cTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTgg > 2:588078/1‑76 (MQ=255) cTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTgg < 2:8638307/76‑1 (MQ=255) tGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGc > 1:8482144/1‑76 (MQ=255) tGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGc > 1:5029094/1‑76 (MQ=255) ttATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCtt > 1:3693595/1‑76 (MQ=255) | GCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTT > REL606/2583208‑2583357 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |