| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2066317 = | 287 (1.060) | 3 (0.010) | 3/128 | 20.2 | 1.2% | coding (287/840 nt) | wcaA | predicted glycosyl transferase |
| ? | REL606 | = 2066313 | 243 (1.060) | coding (291/840 nt) | wcaA | predicted glycosyl transferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 292 total aligned reads displayed.
GTTAGCGTACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACCGCGCACGC > REL606/2066238‑2066387 | tttAGCGTACAAAAAGGCGTGTGTGACCGGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCAt < 1:972281/75‑1 (MQ=255) tAGCGTACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtc > 1:2785755/1‑76 (MQ=255) gCGTACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcat < 1:3768117/76‑1 (MQ=255) cGTACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatc < 2:262053/76‑1 (MQ=255) cGTACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatc < 1:6940216/76‑1 (MQ=255) gTACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatca > 1:3006513/1‑76 (MQ=255) aCAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatcatc < 2:1652170/76‑1 (MQ=255) aCAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatcatc < 1:6226603/76‑1 (MQ=255) cAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatcatca < 1:2268533/76‑1 (MQ=255) cAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGGGTCCATtcatcatca > 2:7894658/1‑76 (MQ=255) aaaaaGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatcatcat < 2:1990671/76‑1 (MQ=255) aaaaGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatcatcatc > 1:2101958/1‑76 (MQ=255) aaaGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatcatcatca < 1:2920313/76‑1 (MQ=255) aaaGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGGGTCCATtcatcatcatca > 1:5134006/1‑76 (MQ=255) ggCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCg < 2:2924566/76‑1 (MQ=255) gCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGa < 2:6853516/76‑1 (MQ=255) gCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGa > 1:441499/1‑76 (MQ=255) cGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGAt > 1:4870645/1‑76 (MQ=255) gtgtgtGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATc > 2:624656/1‑76 (MQ=255) tgtttgACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATcc < 1:7912410/76‑1 (MQ=255) tgtgtgACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATcc > 1:384748/1‑76 (MQ=255) gtgtgACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATccc > 1:656123/1‑76 (MQ=255) gtgtgACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATccc > 1:4661802/1‑76 (MQ=255) gtgACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCAT‑‑‑TCATCATCATCGATCCCGGTGa < 2:8061981/76‑1 (MQ=255) tgACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGt < 2:7135449/76‑1 (MQ=255) gACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTg > 1:8486503/1‑76 (MQ=255) gACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGGCCATTCATCATCATCATCGATCCCGGTg > 1:1284348/1‑76 (MQ=255) gACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGGGTCCATTCATCATCATCATCGATCCCGGTg > 1:6095671/1‑76 (MQ=255) aCCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGa < 1:2317486/76‑1 (MQ=255) aCCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGAACCCGGTGa > 2:4629250/1‑76 (MQ=255) ccAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGat < 1:5703571/76‑1 (MQ=255) cAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGata < 1:7443329/76‑1 (MQ=255) aGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGatat > 2:70559/1‑76 (MQ=255) gTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGatata < 1:7697787/76‑1 (MQ=255) gTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGatata < 2:2825744/76‑1 (MQ=255) gTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGatata < 1:3195798/76‑1 (MQ=255) gTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGatata > 2:3156727/1‑76 (MQ=255) gTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGatata < 2:1271442/76‑1 (MQ=255) ttGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGatatat > 2:7652961/1‑76 (MQ=255) ttGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGatatat < 2:8233139/76‑1 (MQ=255) ttGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGatatat > 2:4430286/1‑76 (MQ=255) tGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATAtt < 1:8424772/76‑1 (MQ=255) gCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTc > 2:6877114/1‑76 (MQ=255) gCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTc < 1:1978895/76‑1 (MQ=255) gCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTc < 1:1722486/76‑1 (MQ=255) cTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTcc > 1:8731705/1‑76 (MQ=255) cTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTcc > 2:1790145/1‑76 (MQ=255) cTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTcc < 1:104176/76‑1 (MQ=255) tGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTccc < 1:3462754/76‑1 (MQ=255) tttATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCt > 1:6769471/1‑76 (MQ=255) tttATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCt < 2:6009029/76‑1 (MQ=255) tttATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCt > 2:8812769/1‑76 (MQ=255) tttATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCt > 1:3575869/1‑76 (MQ=255) tttATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCt > 2:6039113/1‑76 (MQ=255) ttATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCtt < 1:8021627/76‑1 (MQ=255) ttATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCtt < 1:2407139/76‑1 (MQ=255) ttATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCtt > 1:8880183/1‑76 (MQ=255) tATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTg > 2:2387128/1‑76 (MQ=255) aTGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTgc > 2:5823710/1‑76 (MQ=255) aTGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTgc > 2:8160351/1‑76 (MQ=255) ggCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGcc < 1:7124379/76‑1 (MQ=255) ggCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGcc < 1:5502389/76‑1 (MQ=255) gCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCa > 2:5630468/1‑76 (MQ=255) gCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCa < 1:5655921/76‑1 (MQ=255) gAGGAAGACGCTCAGACGGTTGGGGGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGc > 2:5002885/1‑76 (MQ=255) aGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCa > 2:5169978/1‑76 (MQ=255) aGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCa > 2:3843313/1‑76 (MQ=255) ggAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCAt < 2:338185/76‑1 (MQ=255) aaGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATaa > 2:2044719/1‑76 (MQ=255) aaGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATaa > 1:1679393/1‑76 (MQ=255) aaGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATaa > 2:2289040/1‑76 (MQ=255) aGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAAt < 1:419530/76‑1 (MQ=255) cGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGc > 2:7315601/1‑76 (MQ=255) cGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGc > 1:388948/1‑76 (MQ=255) cTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCt > 1:8603357/1‑76 (MQ=255) cTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCt < 1:3399404/76‑1 (MQ=255) tCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTg > 1:8293634/1‑76 (MQ=255) tCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTg < 2:5276542/76‑1 (MQ=255) cAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTgg > 2:1430770/1‑76 (MQ=255) aCGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTa < 2:2533701/76‑1 (MQ=255) cGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTAc > 2:8398282/1‑76 (MQ=255) ggTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACg < 1:1244907/76‑1 (MQ=255) gTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGt > 2:8928526/1‑76 (MQ=255) gTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGt < 2:6391012/76‑1 (MQ=255) ttGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTa > 1:6413415/1‑76 (MQ=255) ttGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTa < 1:4358755/76‑1 (MQ=255) ttGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTa < 1:594653/76‑1 (MQ=255) ttGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTa > 2:2158625/1‑76 (MQ=255) ttGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTa < 2:3577246/76‑1 (MQ=255) tGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTAc > 2:6397440/1‑76 (MQ=255) tGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTAc < 2:4103830/76‑1 (MQ=255) tGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTCACGTAc > 1:8095035/1‑76 (MQ=255) gtgtCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACcgc > 1:527973/1‑76 (MQ=255) tgaccATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACcgcg > 1:4956390/4‑76 (MQ=255) gtCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACCgcgc < 2:5322558/76‑1 (MQ=255) gtCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACCgcgc > 1:2524415/1‑76 (MQ=255) tCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACCGCGCa > 1:3490865/1‑76 (MQ=255) tCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACCGCGCa > 2:4882480/1‑76 (MQ=255) cATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACCGCGCACg > 1:4565329/1‑76 (MQ=255) aTTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACCGCGCACGc > 2:3014108/1‑76 (MQ=255) | GTTAGCGTACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACCGCGCACGC > REL606/2066238‑2066387 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |