Predicted mutation
evidence seq id position mutation annotation gene description
RA REL606 3,755,256 +A coding (225/864 nt) yicC → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*REL6063,755,2541.A98.9% 1097.8 / 2.4 270coding (223/864 nt)yicChypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (1/2);  new base A (130/137);  total (131/139)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01

Only 100 of 306 total aligned reads displayed.

CGCGAGCGTATTCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCCGCGAACTGGGTAAAAATGCAGAG  >  REL606/3755179‑3755327
                                                                             |                                                                         
cgcgAGCGTATTCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGcac                                                                            >  2:1090259/1‑76 (MQ=255)
 gggAGCGTATTCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGcaca                                                                          <  2:1339728/74‑1 (MQ=255)
 gggAGCGTATTCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGcaca                                                                          <  1:2801576/74‑1 (MQ=255)
 gcgAGCGTATTCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGcaca                                                                          <  1:1074840/76‑1 (MQ=255)
 gcgAGCGTATTCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGcaca                                                                          >  1:2580948/1‑76 (MQ=255)
  ggAGCGTATTCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACaa                                                                         <  2:802285/75‑1 (MQ=255)
  ggAGCGTATTCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACaa                                                                         <  1:2290531/75‑1 (MQ=255)
  ggAGCGTATTCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACaa                                                                         <  2:4163144/75‑1 (MQ=255)
   gAGCGTATTCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACaaa                                                                        >  1:1860389/1‑75 (MQ=255)
   gAGCATATTCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACaaa                                                                        <  2:5144952/76‑2 (MQ=255)
    aGCGTATTCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACaaag                                                                       >  2:6980914/1‑74 (MQ=255)
     gCGTATTCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACaaagg                                                                      <  2:3441438/76‑4 (MQ=255)
        tATTCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGa                                                                    >  2:5802329/1‑76 (MQ=255)
         aTTCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAg                                                                   >  2:4975948/1‑76 (MQ=255)
           tCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTGCCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCt                                                                 <  1:970404/76‑1 (MQ=255)
           tCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCt                                                                 >  1:5086421/1‑76 (MQ=255)
           tCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCt                                                                 >  1:5460399/1‑76 (MQ=255)
           tCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCt                                                                 <  1:6456316/76‑1 (MQ=255)
            cGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTg                                                                >  2:7229280/1‑76 (MQ=255)
               tctcGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATc                                                             >  1:2057018/1‑76 (MQ=255)
                ctcGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATcc                                                            >  1:5247233/1‑76 (MQ=255)
                  cGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTc                                                          <  1:6978366/76‑1 (MQ=255)
                   gCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCa                                                         <  1:7658122/76‑1 (MQ=255)
                   gCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCa                                                         <  1:1762667/76‑1 (MQ=255)
                    ccTGACGCGCGGTAAAGTGGAATGTAACCTGCGCTATGAGCCAGATGTTAGCGACCAAAGGTGAGCTGATCCTcga                                                        >  2:6325256/1‑74 (MQ=255)
                     cTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAAt                                                       <  1:5588262/76‑1 (MQ=255)
                     cTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAAt                                                       <  2:3603912/76‑1 (MQ=255)
                      tGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATg                                                      <  1:5774819/76‑1 (MQ=255)
                      tGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATg                                                      >  2:1647221/1‑76 (MQ=255)
                        aCGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGaa                                                    >  1:8211795/1‑76 (MQ=255)
                         cgcgcgGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGaaa                                                   <  2:7552460/76‑1 (MQ=255)
                         cgcgcgGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGaaa                                                   <  1:1588232/76‑1 (MQ=255)
                          gcgcgGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGaaaa                                                  >  2:3875096/1‑76 (MQ=255)
                          gcgcgGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGaaaa                                                  <  2:6475401/76‑1 (MQ=255)
                           cgcgGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGaaaaa                                                 <  1:4738478/76‑1 (MQ=255)
                           cgcgGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGaaaaa                                                 <  2:2895952/76‑1 (MQ=255)
                           cgcgGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGaaaaa                                                 <  1:2193608/76‑1 (MQ=255)
                             cgGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACt                                               <  2:446597/76‑1 (MQ=255)
                             cgGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACt                                               >  2:8146523/1‑76 (MQ=255)
                               gTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGGTCCTCAATGAAAAACTgg                                             >  2:606582/1‑76 (MQ=255)
                               gTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTgg                                             >  1:88876/1‑76 (MQ=255)
                               gTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTgg                                             <  1:4643071/76‑1 (MQ=255)
                                tAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAGAAACTGGc                                            >  2:8278479/1‑76 (MQ=255)
                                tAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGc                                            >  2:7283870/1‑76 (MQ=255)
                                 aaaGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCt                                           <  2:5680787/76‑1 (MQ=255)
                                 aaaGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCt                                           >  1:3390592/1‑76 (MQ=255)
                                 aaaGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCt                                           <  2:4434539/76‑1 (MQ=255)
                                 aaaGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCt                                           <  2:329059/76‑1 (MQ=255)
                                     tGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAAc                                       <  2:6720343/76‑1 (MQ=255)
                                      ggAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACa                                      <  2:5422285/76‑1 (MQ=255)
                                       gAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAg                                     >  2:2594344/1‑76 (MQ=255)
                                        aaTGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGc                                    <  1:3041296/76‑1 (MQ=255)
                                        aaTGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGc                                    <  1:6531804/76‑1 (MQ=255)
                                          tGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTg                                  >  2:6175914/1‑76 (MQ=255)
                                          tGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTg                                  >  1:7804579/1‑76 (MQ=255)
                                          tGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTg                                  <  2:4761694/76‑1 (MQ=255)
                                          tGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTg                                  <  1:6132058/76‑1 (MQ=255)
                                           gTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTgg                                 >  1:3543983/1‑76 (MQ=255)
                                           gTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTgg                                 <  1:4527908/76‑1 (MQ=255)
                                           gTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTgg                                 <  2:7616313/76‑1 (MQ=255)
                                            tACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGt                                >  1:1347380/1‑76 (MQ=255)
                                            tACCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGt                                >  2:1185783/1‑76 (MQ=255)
                                             aCCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTa                               >  2:7061578/1‑76 (MQ=255)
                                             aCCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTa                               <  1:731390/76‑1 (MQ=255)
                                             aCCCTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTa                               <  2:2081700/76‑1 (MQ=255)
                                              cccTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTaa                              >  1:2715258/1‑76 (MQ=255)
                                              cccTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTaa                              <  2:3117548/76‑1 (MQ=255)
                                               ccTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAAc                             <  2:1897970/76‑1 (MQ=255)
                                               ccTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAAc                             <  1:7100330/76‑1 (MQ=255)
                                               ccTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAAGGAAAAACTGGCTAAACAGCTGGTAAc                             <  2:5263646/76‑1 (MQ=255)
                                                cTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACt                            <  1:6014499/76‑1 (MQ=255)
                                                cTGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACt                            >  1:5167264/1‑76 (MQ=255)
                                                 tGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTg                           <  2:3696369/76‑1 (MQ=255)
                                                 tGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTg                           <  2:6898652/76‑1 (MQ=255)
                                                 tGCGCTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTg                           >  1:3818009/1‑76 (MQ=255)
                                                  gcgcTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGc                          <  2:801379/76‑1 (MQ=255)
                                                    gcTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCcg                        <  2:1562515/76‑1 (MQ=255)
                                                    gcTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCcg                        <  1:6717166/76‑1 (MQ=255)
                                                     cTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCcgc                       >  2:7457086/1‑76 (MQ=255)
                                                     cTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCcgc                       >  1:3915846/1‑76 (MQ=255)
                                                     cTATGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCcgc                       >  2:4661453/1‑76 (MQ=255)
                                                       aTGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCCGCGa                     >  1:121937/1‑76 (MQ=255)
                                                       aTGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCCGCGa                     >  2:808713/1‑76 (MQ=255)
                                                        tGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCCGCGaa                    <  1:7563219/76‑1 (MQ=255)
                                                        tGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCCGCGaa                    >  1:5904633/1‑76 (MQ=255)
                                                        tGAGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCCGCGaa                    <  1:6754907/76‑1 (MQ=255)
                                                          aGCCAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGGAACTGCCGCGAACt                  >  1:5209526/1‑76 (MQ=255)
                                                             cAGATGTTAGCGCCCAAAGGCGAGCTGATCCTCAATGAAAAACTGGCTAAACCGCTGGTAACTGCCGCGGACTggg               >  2:1615530/1‑76 (MQ=255)
                                                             cAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCCGCGAACTggg               <  1:532657/76‑1 (MQ=255)
                                                             cAGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCCGCGAACTggg               >  1:6350273/1‑76 (MQ=255)
                                                              aGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCCGCGAACTGGGt              <  2:5548344/76‑1 (MQ=255)
                                                              aGATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCCGCGAACTGGGt              <  1:8066933/76‑1 (MQ=255)
                                                               gATGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCCGCGAACTGGGTa             <  2:6784282/76‑1 (MQ=255)
                                                                aTGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCCGCGAACTGGGTaa            >  1:405106/1‑76 (MQ=255)
                                                                aTGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCCGCGAACTGGGTaa            >  2:504246/1‑76 (MQ=255)
                                                                aTGTTAGCGCACAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCCGCGAACTGGGTaaa           <  1:1200514/76‑1 (MQ=255)
                                                                 tGTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCCGCGAACTGGGTaaa           <  1:7370479/76‑1 (MQ=255)
                                                                  gTTAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCCGCGAACTGGGTaaaa          >  2:2335074/1‑76 (MQ=255)
                                                                   ttAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCCGCGAACTGGGTaaaaa         >  2:7722051/1‑76 (MQ=255)
                                                                    tAGCGCACAAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCCGCGAACTGGGTAAAAAt        >  1:7230934/1‑76 (MQ=255)
                                                                             |                                                                         
CGCGAGCGTATTCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCACAAGGTGAGCTGATCCTCAATGAAAAACTGGCTAAACAGCTGGTAACTGCCGCGAACTGGGTAAAAATGCAGAG  >  REL606/3755179‑3755327

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: