New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	69410 =	NA (NA)	9 (0.040) +AATCCGAGCCGTA	3/124	16.7	3.5%	intergenic (‑56/+229)	araD/araA	L‑ribulose‑5‑phosphate 4‑epimerase/L‑arabinose isomerase
	?	REL606	= 2293898	300 (1.200)					intergenic (+48/‑194)	nrdA/nrdB	ribonucleotide‑diphosphate reductase alpha subunit/ribonucleotide‑diphosphate reductase beta subunit
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ACGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/69448‑69410 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATCTCAATATCAGATCTTACATGCGCCGC  <  REL606/2293898‑2293831                                        |||||||||||||                                                                     ggcCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAACCGGAGCCGTAGAGCCGTAGGCCGGATAAGGCGTT                                              <  2:6494733/73‑1       GATGCGACGCTGGCGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGAGCCGTAGGCCGGATAAGGCGTTTACGCt                                        >  2:6090112/1‑75        ATGCGACGCTGGCGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGAGCCGTAGGCCGGATAAGGGGGTTACGCtg                                       >  2:3087057/1‑74         TGCGACGCTGGCGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGAGCCGTAGGCCGGATAAGGGGGTTACGCCGC                                      >  2:4296700/1‑76          GCGACGCTGGCGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGAGCCGTAGGCCGGATAAGGCGTTTACGCTGCA                                     >  2:4918993/1‑76            GACGCTGGCGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGAGCCGTAGGCCGGATAAGGCGTTTACGCTGCATC                                   >  2:3517604/1‑76            GACGCTGGCGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGAGCCGTAGGCCGGATAAGGCGTTCACGCCGCATC                                   >  2:2804595/1‑76            GACGCTGGCGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGAGCCGTAGGCCGGATAAGGCGTTCACGCCGCATC                                   >  2:3679171/1‑76            GACGCTGGCGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGAGCCGTAGGCCCGATAAAGGGTTTACGCTGCAac                                   >  2:7072190/1‑74                                             GAGCCGTAGAGCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCCCGAAACCAGAGCGTACATGCGCCGC  >  1:902835/1‑76                                        |||||||||||||                                                                     ACGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/69448‑69410 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATCTCAATATCAGATCTTACATGCGCCGC  <  REL606/2293898‑2293831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.