New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2255061 | NA (NA) | 11 (0.050) +AATCCGAGCCGTA |
3/124 | 16.7 | 4.3% | intergenic (+679/+151) | eco/mqo | ecotin precursor/malate:quinone oxidoreductase |
? | REL606 | = 2293898 | 300 (1.200) | intergenic (+48/‑194) | nrdA/nrdB | ribonucleotide‑diphosphate reductase alpha subunit/ribonucleotide‑diphosphate reductase beta subunit | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
ACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2255003‑2255061 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATCTCAATATCAGATCTTACATGCGCCGC < REL606/2293898‑2293831 ||||||||||||| ACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAcg > 1:2139352/1‑60 ggcCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAACCGGAGCCGTAGAGCCGTAGGCCGGATAAGGCGTT < 2:6494733/73‑1 TGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGAGCCGTAGGGCGGGTAAAGCGgtc > 2:4574055/1‑73 TGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGAGCCGTAGGCCGGGTAAGGCGgtc > 2:6962212/1‑73 GATGCGACGCTGGCGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGAGCCGTAGGCCGGATAAGGCGTTTACGCt > 2:6090112/1‑75 ATGCGACGCTGGCGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGAGCCGTAGGCCGGATAAGGGGGTTACGCtg > 2:3087057/1‑74 TGCGACGCTGGCGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGAGCCGTAGGCCGGATAAGGGGGTTACGCCGC > 2:4296700/1‑76 GCGACGCTGGCGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGAGCCGTAGGCCGGATAAGGCGTTTACGCTGCA > 2:4918993/1‑76 GACGCTGGCGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGAGCCGTAGGCCGGATAAGGCGTTTACGCTGCATC > 2:3517604/1‑76 GACGCTGGCGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGAGCCGTAGGCCGGATAAGGCGTTCACGCCGCATC > 2:2804595/1‑76 GACGCTGGCGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGAGCCGTAGGCCGGATAAGGCGTTCACGCCGCATC > 2:3679171/1‑76 GACGCTGGCGCGTCTTATCAGGCCTACAAATCCGAGCCGTAGAGCCGTAGGCCCGATAAAGGGTTTACGCTGCAac > 2:7072190/1‑74 GAGCCGTAGAGCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCCCGAAACCAGAGCGTACATGCGCCGC > 1:902835/1‑76 ||||||||||||| ACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2255003‑2255061 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATCTCAATATCAGATCTTACATGCGCCGC < REL606/2293898‑2293831 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |